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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1327265..1328260- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011135-T1 ID=CBS51388_011135-T1|Name=CBS51388_011135-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=996bp|location=Sequence derived from alignment at An18:1327265..1328260- (Aspergillus niger CBS 513.88)
ATGGTCAAGAAGAGGGCGAACAAGTAAGACCGAACCCTTTCCTATCCCAC
CCATCCATGCCATGCCACATGCCATGTATACATATACACAATCTACGCAC
ACCTGAATGAAGACGGCCGCACGGAAAAATATTCGCCATACATTTGCCGC
AGAATGGCCCGGCTACCGTACAGTGTTGTGTGTGATTTTGGGGAAAAAAC
AGAAGAAAATTGAAGAAATGGCGATGTTCAAATCGAAAACATGGAAAATT
CGCAAATTTAAAGAAGAGACCGATAAACTAACCTATTTCACAGCGGTCGT
AACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGC
TCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACA
TGGTCGAGTCCGCTGCCATCCGTACGTTCCACGATCTTGCTCCATTGATC
TGAGTTCTTCCCGAAACCGTCCGCGCGCGCTGTTTGTTCATTCTGAAAGA
GCTGGGAAGTGGGGTGTTTTATGTATGCGTGTGCGTATGCGTGTGTATGC
AACAATTCGAAGCGAAATGAACTCGACCGGAATACGACATCGGATAAGAA
GAAAGAGGAATAGATACAACAGCGCGACGCACGAGTGAACGGAATTCGAC
CCATCCTGAAAGACAACATCGGACTGACTGGTTCTTTTTCCAACTCTCCA
GGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCCAAGAT
GTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAAGATTG
TTCGGTACGCCACCACCCACTCAACAACGATGAATGCGTCGAATCATCAT
CGATTTCGAGAACAAACACAAGCTAATGATTATCCTATAGTGTCCGCTCC
CGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAA
GGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAA back to topCoding sequence (CDS) from alignment at An18:1327265..1328260- >CBS51388_011135-T1 ID=CBS51388_011135-T1|Name=CBS51388_011135-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1440bp|location=Sequence derived from alignment at An18:1327265..1328260- (Aspergillus niger CBS 513.88)
TGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCA
GGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCT
ATGTAAGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCC
AAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAA
GATTGTTCGCGGTCGTAACAAGAACGGCCGCGGCCACGTCAAGCCCGTGC
GCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACAAGGCCATCAAGAGA
TTCACCATCCGCAACATGGTCGAGTCCGCTGCCATCCATGGTCAAGAAGA
GGGCGAACAATGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCT
CCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGC
CGCCAAGGCTATGTAAGTGATATCTCGGACGCCTCCGTCTTCACCGACTA
CGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTA
TCCACGGCAAGATTGTTCGCGGTCGTAACAAGAACGGCCGCGGCCACGTC
AAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACAAGGC
CATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCTGCCATCCATG
GTCAAGAAGAGGGCGAACAATGTCCGCTCCCGGGAAGGTCGTCGCAACCG
TGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACC
CCCCTCAGGCCGCCAAGGCTATGTAAGTGATATCTCGGACGCCTCCGTCT
TCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTC
TCCTGCGCTATCCACGGCAAGATTGTTCGCGGTCGTAACAAGAACGGCCG
CGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCA
AGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCT
GCCATCCATGGTCAAGAAGAGGGCGAACAATGTCCGCTCCCGGGAAGGTC
GTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAG
AAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAAGTGATATCTCGGAC
GCCTCCGTCTTCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCA
GTACTGCGTCTCCTGCGCTATCCACGGCAAGATTGTTCGCGGTCGTAACA
AGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGC
TGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGT
CGAGTCCGCTGCCATCCATGGTCAAGAAGAGGGCGAACAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265GYK |
| DBxref | InterPro:IPR038551 |
| DBxref | InterPro:IPR000892 |
| DBxref | PFAM:PF01283 |
| Product | 40S ribosomal protein S26 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1327265..1328260 - |
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