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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1368872..1369811- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011150-T1 ID=CBS51388_011150-T1|Name=CBS51388_011150-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=940bp|location=Sequence derived from alignment at An18:1368872..1369811- (Aspergillus niger CBS 513.88)
ATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGG
TAAGACTTGTCTTTTGATGTGAGTACCCTCCCCTTCTTCCATTCTTTGCT
GGGTAGGGATCAAACAGCGAACTGACCTTGGCTTCTTCTTCGACCAGTGT
CTTCTCCAAGGGTACCTTCCCTGAGGTTAGCTTCCACCGACCCTCCTGGC
CTGATCCCTAATGCCGTCTTTCCAACCCCCCCATCGTCAATCCGAGTTAT
CTGGATAGCCTTCCGGTCAAACACTCCGCTTCTATCAAACTGACCCTATC
ACGCTTTAGGTGTACGTCCCTACTGTGTTCGAGAATTACGTCGCCGACGT
AGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTTGGGATACGGCTGGTC
AGGAAGATTACGACCGTCTCCGTCCCCTCTCATACCCTGACTCCCATGTC
ATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTCCCTCGACAACGTCCA
GGAGAAGGTTAGTCCTCCGTCACATGCCTGGTCTCCTTGGCGGGCATATG
GGCAAAGAATCTGCCCTCCAGGTAACTAACATGATTACAGTGGATCTCTG
AAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAG
ATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGACCTC
CCAGAAGCCGGTTACCCCTGAGCAGGTATGTGGCACACGACCAAGAGGAT
GCATTATCCCTTGAGATAGCGGCTAATATGCGATTAGGGTGAGGAGGTTC
GCAAGAAGATCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAAC
GAGGGTGTCCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGAC
CAAGACCCACAAGAGCAAGAAGAAGTGCACCATCCTGTAA back to topCoding sequence (CDS) from alignment at An18:1368872..1369811- >CBS51388_011150-T1 ID=CBS51388_011150-T1|Name=CBS51388_011150-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2910bp|location=Sequence derived from alignment at An18:1368872..1369811- (Aspergillus niger CBS 513.88)
GGTGAGGAGGTTCGCAAGAAGATCGGTGCTTACAAGTACCTTGAGTGCTC
TGCGCGCACCAACGAGGGTGTCCGCGAGGTCTTTGAGGCTGCCACCCGGG
CTGCCCTATTGACCAAGACCCACAAGAGCAAGAAGAAGTGCACCATCCTG
TAATGGATCTCTGAAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCT
CGTTGGCTGCAAGATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGC
TTCACAAGACCTCCCAGAAGCCGGTTACCCCTGAGCAGGTGTACGTCCCT
ACTGTGTTCGAGAATTACGTCGCCGACGTAGAGGTCGATGGCAAGCACGT
CGAGCTTGCCCTTTGGGATACGGCTGGTCAGGAAGATTACGACCGTCTCC
GTCCCCTCTCATACCCTGACTCCCATGTCATCCTGATCTGTTTCGCGGTT
GACTCTCCCGACTCCCTCGACAACGTCCAGGAGAAGTGTCTTCTCCAAGG
GTACCTTCCCTGAGATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGC
GATGGTGCCTGCGGTAAGACTTGTCTTTTGATGGTGAGGAGGTTCGCAAG
AAGATCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAACGAGGG
TGTCCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGACCAAGA
CCCACAAGAGCAAGAAGAAGTGCACCATCCTGTAATGGATCTCTGAAGTC
CTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAGATGGA
TCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGACCTCCCAGA
AGCCGGTTACCCCTGAGCAGGTGTACGTCCCTACTGTGTTCGAGAATTAC
GTCGCCGACGTAGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTTGGGA
TACGGCTGGTCAGGAAGATTACGACCGTCTCCGTCCCCTCTCATACCCTG
ACTCCCATGTCATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTCCCTC
GACAACGTCCAGGAGAAGTGTCTTCTCCAAGGGTACCTTCCCTGAGATGG
CTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGGTAAG
ACTTGTCTTTTGATGGTGAGGAGGTTCGCAAGAAGATCGGTGCTTACAAG
TACCTTGAGTGCTCTGCGCGCACCAACGAGGGTGTCCGCGAGGTCTTTGA
GGCTGCCACCCGGGCTGCCCTATTGACCAAGACCCACAAGAGCAAGAAGA
AGTGCACCATCCTGTAATGGATCTCTGAAGTCCTTCACTTCTGCCAGGGA
CTTCCCATCATCCTCGTTGGCTGCAAGATGGATCTGCGCCATGACCCCAA
GACCATTGAGGAGCTTCACAAGACCTCCCAGAAGCCGGTTACCCCTGAGC
AGGTGTACGTCCCTACTGTGTTCGAGAATTACGTCGCCGACGTAGAGGTC
GATGGCAAGCACGTCGAGCTTGCCCTTTGGGATACGGCTGGTCAGGAAGA
TTACGACCGTCTCCGTCCCCTCTCATACCCTGACTCCCATGTCATCCTGA
TCTGTTTCGCGGTTGACTCTCCCGACTCCCTCGACAACGTCCAGGAGAAG
TGTCTTCTCCAAGGGTACCTTCCCTGAGATGGCTGAAATCCGCCGCAAGC
TCGTCATCGTGGGCGATGGTGCCTGCGGTAAGACTTGTCTTTTGATGGTG
AGGAGGTTCGCAAGAAGATCGGTGCTTACAAGTACCTTGAGTGCTCTGCG
CGCACCAACGAGGGTGTCCGCGAGGTCTTTGAGGCTGCCACCCGGGCTGC
CCTATTGACCAAGACCCACAAGAGCAAGAAGAAGTGCACCATCCTGTAAT
GGATCTCTGAAGTCCTTCACTTCTGCCAGGGACTTCCCATCATCCTCGTT
GGCTGCAAGATGGATCTGCGCCATGACCCCAAGACCATTGAGGAGCTTCA
CAAGACCTCCCAGAAGCCGGTTACCCCTGAGCAGGTGTACGTCCCTACTG
TGTTCGAGAATTACGTCGCCGACGTAGAGGTCGATGGCAAGCACGTCGAG
CTTGCCCTTTGGGATACGGCTGGTCAGGAAGATTACGACCGTCTCCGTCC
CCTCTCATACCCTGACTCCCATGTCATCCTGATCTGTTTCGCGGTTGACT
CTCCCGACTCCCTCGACAACGTCCAGGAGAAGTGTCTTCTCCAAGGGTAC
CTTCCCTGAGATGGCTGAAATCCGCCGCAAGCTCGTCATCGTGGGCGATG
GTGCCTGCGGTAAGACTTGTCTTTTGATGGTGAGGAGGTTCGCAAGAAGA
TCGGTGCTTACAAGTACCTTGAGTGCTCTGCGCGCACCAACGAGGGTGTC
CGCGAGGTCTTTGAGGCTGCCACCCGGGCTGCCCTATTGACCAAGACCCA
CAAGAGCAAGAAGAAGTGCACCATCCTGTAATGGATCTCTGAAGTCCTTC
ACTTCTGCCAGGGACTTCCCATCATCCTCGTTGGCTGCAAGATGGATCTG
CGCCATGACCCCAAGACCATTGAGGAGCTTCACAAGACCTCCCAGAAGCC
GGTTACCCCTGAGCAGGTGTACGTCCCTACTGTGTTCGAGAATTACGTCG
CCGACGTAGAGGTCGATGGCAAGCACGTCGAGCTTGCCCTTTGGGATACG
GCTGGTCAGGAAGATTACGACCGTCTCCGTCCCCTCTCATACCCTGACTC
CCATGTCATCCTGATCTGTTTCGCGGTTGACTCTCCCGACTCCCTCGACA
ACGTCCAGGAGAAGTGTCTTCTCCAAGGGTACCTTCCCTGAGATGGCTGA
AATCCGCCGCAAGCTCGTCATCGTGGGCGATGGTGCCTGCGGTAAGACTT
GTCTTTTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264YNR |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003578 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF00025 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1368872..1369811 - |
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