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CBS51388_011162-T1, CBS51388_011162-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011162-T1
Unique NameCBS51388_011162-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1416525..1417934-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011162-T1 ID=CBS51388_011162-T1|Name=CBS51388_011162-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1410bp|location=Sequence derived from alignment at An18:1416525..1417934- (Aspergillus niger CBS 513.88)
ATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAA
GAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTC
GCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAAC
ATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCA
GCTGGATGAGGAGAGATGTATGTTCATCCCTATTTCTCCCCAATATAACC
TCGACTCCGGGCAGATCCTTGTCCATCGTCTGTCGTTCTCTTTGCCGGTA
TGTGGCTGACCTGATCCAGTCATTGTCAAGGCATCATCCGGACCGCGTTA
TGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCA
CCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCG
AGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCA
GATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCC
GAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTA
GGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGG
AAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCC
TGAAAGGTATACATAATCAACTCCGGGCGCGGGCTTAGGTAGGCCTAGAT
CGCTAACTTCATCCTAGTTGTCTCGTCCGCTATTGTCGACAAATACATCG
GTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACAC
GAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGACG
TTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGG
AGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATC
ATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGC
GGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTC
GCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAG
ATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGA
TCTTCGCAACGTCGTTACGGAAGCGTATGTCTATTTCCCGTTGTTGCTCT
GCCATTTTTATTACATGACTAGGACTAATTCGGAGACAGTGGTCTATTTG
CTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAACAGAGCG
GTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCA
GAAGTTGTAG
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Coding sequence (CDS) from alignment at An18:1416525..1417934-

>CBS51388_011162-T1 ID=CBS51388_011162-T1|Name=CBS51388_011162-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4728bp|location=Sequence derived from alignment at An18:1416525..1417934- (Aspergillus niger CBS 513.88)
TGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACT
TCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAG
CTGGAATACCAGAAGTTGTAGTTGTCTCGTCCGCTATTGTCGACAAATAC
ATCGGTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGA
ACACGAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAA
GACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTG
ATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAA
GATCATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGC
GAGCGGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTC
GGTCGCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGG
CGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTG
CTGATCTTCGCAACGTCGTTACGGAAGCTCATTGTCAAGGCATCATCCGG
ACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAA
AGCAGGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGA
ATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGA
CCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCC
GCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTC
CAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCC
GGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGA
CCAACTTCCTGAAAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGC
GCTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCA
AGCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGAT
ATCTCTGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGG
AGAAGTGTTGAAGCAGCTGGATGAGGAGAGATTGGTCTATTTGCTATCAA
GGATTACCGGGACGCGATCAACCAGGATGACTTCAACAGAGCGGTCCGCA
AGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCAGAAGTTG
TAGTTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCGCGG
TTAATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCAT
CTTCATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGTA
CTTCGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCAG
CTGGATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGAA
TCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGCGGGTCGTCTCGACC
GCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTTG
AAGATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGAG
TGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTCG
TTACGGAAGCTCATTGTCAAGGCATCATCCGGACCGCGTTATGTCGTCGG
TTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTGTCG
CCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAGAGAGGTT
GATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGATCAACTT
TGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAGTTA
TCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATCAAG
CCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGACGTT
GTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAGATG
AACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAG
GAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCA
TGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCTGAAGAGAACATC
AAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCT
GGATGAGGAGAGATTGGTCTATTTGCTATCAAGGATTACCGGGACGCGAT
CAACCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGA
AGCTGGAGGGCAAGCTGGAATACCAGAAGTTGTAGTTGTCTCGTCCGCTA
TTGTCGACAAATACATCGGTGAATCTGCGCGGTTAATAAGAGAGATGTTC
GGATACGCCAAAGAACACGAGCCTTGCATCATCTTCATGGACGAAATCGA
CGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAAA
TCCAGCGTACATTGATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTAC
CTTGGAAAGACGAAGATCATCATGGCCACGAATCGGCCTGATACGCTTGA
CCCGGCTCTGCTGCGAGCGGGTCGTCTCGACCGCAAGATCGAGATTCCCC
TGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAGATCCACTCCAGCACC
GTTCAACTGGATGGCGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTGA
CGGACTCAACGGTGCTGATCTTCGCAACGTCGTTACGGAAGCTCATTGTC
AAGGCATCATCCGGACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGA
TAAGGCAAAGCTAAAGCAGGGCACCCGTGTCGCCCTCGATATGACCACAC
TTACTATAATGAGAATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAAC
ATGTCACTGGAGGACCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCT
GAACGAACAGATCCGCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGA
ACCCCGAGCTTTTCCAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTC
CTCTACGGTCCTCCGGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGC
AAGCTCAATGGAGACCAACTTCCTGAAAGATGAACGGCGCCAGCGATCCG
GAGAGAGAGCAGGCGCTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCG
AGAATGGGAAGCCAAGCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGC
AACGAGAGTTCGATATCTCTGAAGAGAACATCAAGGCGCTGCAAAGCGTC
GGCCAGATCATCGGAGAAGTGTTGAAGCAGCTGGATGAGGAGAGATTGGT
CTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAA
CAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGG
AATACCAGAAGTTGTAGTTGTCTCGTCCGCTATTGTCGACAAATACATCG
GTGAATCTGCGCGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACAC
GAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGACG
TTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGG
AGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATC
ATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGC
GGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTC
GCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAG
ATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGA
TCTTCGCAACGTCGTTACGGAAGCTCATTGTCAAGGCATCATCCGGACCG
CGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCA
GGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGC
TCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCA
GGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGA
GCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAA
GAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGT
ACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAA
CTTCCTGAAAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTC
GAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCT
CAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCT
CTGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAA
GTGTTGAAGCAGCTGGATGAGGAGAGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT4CBS51388_011162Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011162-T1CBS51388_011162-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011162-T1.cdsCBS51388_011162-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011162-T1.exon4CBS51388_011162-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_011162-T1.exon3CBS51388_011162-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011162-T1.exon2CBS51388_011162-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011162-T1.exon1CBS51388_011162-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S proteasome subunit rpt4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1416525..1417934 -
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