You are here

Home

CBS51388_011182-T1, CBS51388_011182-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011182-T1
Unique NameCBS51388_011182-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1464589..1465422+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011182-T1 ID=CBS51388_011182-T1|Name=CBS51388_011182-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=834bp|location=Sequence derived from alignment at An18:1464589..1465422+ (Aspergillus niger CBS 513.88)
ATGCCTAGTAAGTGCACACAAACGTGCTTTATGGTTCTAACGGATGAACT
GACTGTGGATCAGAACAACGCGATTATTGTACGGGATGCTAACGTCTAGA
TACTGTATAGAAAGTGCTGTAACTAATGAAGGCGGAATATAGACAAGATA
CTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATACAA
AAGGTGAGTCAGTATTCATCAAGGTCCAACTATGCTCAGTTCTGAACCGT
GCAGGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCACCA
GAGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTATTA
CACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGATGG
CAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGA
GGATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACG
CGCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGG
GCCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACACCCG
ACGTCTCGGTTCTGGTCCGTTATAGGTGGGATTAGTGGTGGTGCTCTCGG
TTTTATCGTAGCCAATGCTCCAGGAGCATTGGCTGGCGCAGTTGCTGGCA
ATCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTT
TTCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATTAGC
AGCCAAGGTTTTTCAGACGACTATGGGCCGCTGA
back to top

Coding sequence (CDS) from alignment at An18:1464589..1465422+

>CBS51388_011182-T1 ID=CBS51388_011182-T1|Name=CBS51388_011182-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2652bp|location=Sequence derived from alignment at An18:1464589..1465422+ (Aspergillus niger CBS 513.88)
ATGCCTAAACAACGCGATTATTACAAGATACTGGGAGTGTCTCCCAAAGC
AACACAACAAGAAATTCGCAATGCATACAAAAGGGAATCCCTGAAGTCTC
ATCCAGACAGAGTTCCTGTCGATTCACCAGAGAGGGCGGCTCGGACACGC
AAGTTCCAGGAGATTAGCGATGCTTATTACACGTTGTCAGATGTATCACG
CCGACGGGAGTATGATGCGATGAGGATGGCAGGCGGTGTCGAGGAGGAAG
AGGAGGAAGTACCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCTGCTTTT
GGCTTTGGCACGGCCGATAGTGAGCAACGCGCATCCGAGCAATTCGGGTC
GGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAGGCACAG
ATGCTGACGGTCAGACTCGTTCACACCCGACGTCTCGGTTCTGGTCCGTT
ATAGGTGGGATTAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAATGCTCC
AGGAGCATTGGCTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAGTGCGAG
ATGCCAAAGGAAAGAGTGTTTACGATGTTTTCCTCCAGCTTCCTCAGACC
GATCGTGCACGGCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCAGACGAC
TATGGGCCGCTGAATGCCTAAACAACGCGATTATTACAAGATACTGGGAG
TGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGCATACAAAAGGGAA
TCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATTCACCAGAGAGGGC
GGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCTTATTACACGTTGT
CAGATGTATCACGCCGACGGGAGTATGATGCGATGAGGATGGCAGGCGGT
GTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTGCAGGAGGATTCCC
CTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAGCAACGCGCATCCG
AGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGAAGAGGGCCTAGCC
AGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCACACCCGACGTCTCG
GTTCTGGTCCGTTATAGGTGGGATTAGTGGTGGTGCTCTCGGTTTTATCG
TAGCCAATGCTCCAGGAGCATTGGCTGGCGCAGTTGCTGGCAATCGTCTT
GGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACGATGTTTTCCTCCA
GCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAATTAGCAGCCAAGG
TTTTTCAGACGACTATGGGCCGCTGAATGCCTAAACAACGCGATTATTAC
AAGATACTGGGAGTGTCTCCCAAAGCAACACAACAAGAAATTCGCAATGC
ATACAAAAGGGAATCCCTGAAGTCTCATCCAGACAGAGTTCCTGTCGATT
CACCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGAGATTAGCGATGCT
TATTACACGTTGTCAGATGTATCACGCCGACGGGAGTATGATGCGATGAG
GATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTACCCCGTGGAGGTG
CAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCACGGCCGATAGTGAG
CAACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAGAAATGCTGCGTGA
AGAGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGTCAGACTCGTTCAC
ACCCGACGTCTCGGTTCTGGTCCGTTATAGGTGGGATTAGTGGTGGTGCT
CTCGGTTTTATCGTAGCCAATGCTCCAGGAGCATTGGCTGGCGCAGTTGC
TGGCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGAAAGAGTGTTTACG
ATGTTTTCCTCCAGCTTCCTCAGACCGATCGTGCACGGCTTTTGAGTGAA
TTAGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCTGAATGCCTAAACA
ACGCGATTATTACAAGATACTGGGAGTGTCTCCCAAAGCAACACAACAAG
AAATTCGCAATGCATACAAAAGGGAATCCCTGAAGTCTCATCCAGACAGA
GTTCCTGTCGATTCACCAGAGAGGGCGGCTCGGACACGCAAGTTCCAGGA
GATTAGCGATGCTTATTACACGTTGTCAGATGTATCACGCCGACGGGAGT
ATGATGCGATGAGGATGGCAGGCGGTGTCGAGGAGGAAGAGGAGGAAGTA
CCCCGTGGAGGTGCAGGAGGATTCCCCTGGTCTGCTTTTGGCTTTGGCAC
GGCCGATAGTGAGCAACGCGCATCCGAGCAATTCGGGTCGGTGTTTGAAG
AAATGCTGCGTGAAGAGGGCCTAGCCAGCGAAGGCACAGATGCTGACGGT
CAGACTCGTTCACACCCGACGTCTCGGTTCTGGTCCGTTATAGGTGGGAT
TAGTGGTGGTGCTCTCGGTTTTATCGTAGCCAATGCTCCAGGAGCATTGG
CTGGCGCAGTTGCTGGCAATCGTCTTGGTGCAGTGCGAGATGCCAAAGGA
AAGAGTGTTTACGATGTTTTCCTCCAGCTTCCTCAGACCGATCGTGCACG
GCTTTTGAGTGAATTAGCAGCCAAGGTTTTTCAGACGACTATGGGCCGCT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011182CBS51388_011182Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011182-T1.exon1CBS51388_011182-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011182-T1.exon2CBS51388_011182-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011182-T1.exon3CBS51388_011182-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011182-T1.exon4CBS51388_011182-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011182-T1.cdsCBS51388_011182-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011182-T1CBS51388_011182-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1464589..1465422 +
Powered by Drupal