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CBS51388_011183-T1, CBS51388_011183-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011183-T1
Unique NameCBS51388_011183-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1465980..1467070+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011183-T1 ID=CBS51388_011183-T1|Name=CBS51388_011183-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1091bp|location=Sequence derived from alignment at An18:1465980..1467070+ (Aspergillus niger CBS 513.88)
ATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCT
CAAGGGCACAATCTGTCTCTTCGATGTCGACAAGACGCTAACGCCTGCCA
GAGCTGTAAGTACGCAAGAATGAAACCCTTATTACCTGGAATTGCTCTGT
TTATCCGCTCAATGCTCTAAAAGTCTAACCACTTCTTTACTCCGACTTTA
GAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCACAAGT
GCGCGATCGGATTCGTTAGTTGTCTTCATCCTTCTTAGGGTCAGCGCCCA
GTCTCACATGGTCAGGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGAACA
GCTCGGTAGAAACACTACGGACGTCACAACCCTATTCGATTTCTGCTTCG
CTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGCAAC
AGCTTCATCCAATGGCTGGGAGAGGAGAAATACCAGAAGTTGGTCAACTT
CTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCACTT
TCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGGAAT
GCCAGCACCGAGGAGCGGAAGGAATTTGAAGCGTATGTATACGAGCAGTA
GCTCGATGCTCACAGGATAGGACCTTTTGACTGATATCATGAGCAGGTAT
GATAAGATTCACAACATCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGA
GTTCCCTGACTATGGTCTAAGGTATGTAAAAGAATTTCCAGGCCTCTGGT
AACTGCGCAGGGTCATTACAGCCATTAACATTCCTGAACAGCTACTCTAT
TGGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTT
ACTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTAC
AAGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTA
CGAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTG
ATGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAG
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Coding sequence (CDS) from alignment at An18:1465980..1467070+

>CBS51388_011183-T1 ID=CBS51388_011183-T1|Name=CBS51388_011183-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4050bp|location=Sequence derived from alignment at An18:1465980..1467070+ (Aspergillus niger CBS 513.88)
ATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCT
CAAGGGCACAATCTGTCTCTTCGATGTCGACAAGACGCTAACGCCTGCCA
GAGCTAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCAC
AAGTGCGCGATCGGATTCGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGA
ACAGCTCGGTAGAAACACTACGGACGTCACAACCCTATTCGATTTCTGCT
TCGCTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGC
AACAGCTTCATCCAATGGCTGGGAGAGGAGAAATACCAGAAGTTGGTCAA
CTTCTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCA
CTTTCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGG
AATGCCAGCACCGAGGAGCGGAAGGAATTTGAAGCGTATGATAAGATTCA
CAACATCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGAGTTCCCTGACT
ATGGTCTAAGCTACTCTATTGGTGGTGAAATTTCTTTTGACGTTTTCCCG
ACCGGCTGGGACAAGACTTACTGCCTACAACACGTCGAAGCCGAGAAAGA
TATCACGGGTATCGATTACAAGACGATCCACTTCTTCGGTGACAAGACAT
TCCCCGGTGGTAATGACTACGAGATCTACAGTGACCCTAGGACGATCGGT
CACTCCGTTGAGGACCCTGATGACACCATGAGGCAGTTGAGGGAGCTCTT
CCAGCTCTAGATGGCCACCGAAGCAGCCGGCGTTTATCCTGCCCTGCAGG
ACCGCCCCCTCAAGGGCACAATCTGTCTCTTCGATGTCGACAAGACGCTA
ACGCCTGCCAGAGCTAATGTTACCCCGGAGATGCTCACGCTTCTCTCTCA
GCTGCGTCACAAGTGCGCGATCGGATTCGTCGGTGGCTCGAATCTTCCCA
AGCAGCAAGAACAGCTCGGTAGAAACACTACGGACGTCACAACCCTATTC
GATTTCTGCTTCGCTGAGAACGGATTGACCGCTTTCCGCCTGGGCAAACC
TCTTCGCAGCAACAGCTTCATCCAATGGCTGGGAGAGGAGAAATACCAGA
AGTTGGTCAACTTCTTGCTCAAGTACATCGCCAACTTGGAGATTCCTAAG
AAGCGCGGCACTTTCGTTGAATTCCGCAATGGTATGATCAACGTCAGCCC
GATTGGCAGGAATGCCAGCACCGAGGAGCGGAAGGAATTTGAAGCGTATG
ATAAGATTCACAACATCCGCCGAGACCTTGTAGATGCGCTCAAGAAGGAG
TTCCCTGACTATGGTCTAAGCTACTCTATTGGTGGTGAAATTTCTTTTGA
CGTTTTCCCGACCGGCTGGGACAAGACTTACTGCCTACAACACGTCGAAG
CCGAGAAAGATATCACGGGTATCGATTACAAGACGATCCACTTCTTCGGT
GACAAGACATTCCCCGGTGGTAATGACTACGAGATCTACAGTGACCCTAG
GACGATCGGTCACTCCGTTGAGGACCCTGATGACACCATGAGGCAGTTGA
GGGAGCTCTTCCAGCTCTAGATGGCCACCGAAGCAGCCGGCGTTTATCCT
GCCCTGCAGGACCGCCCCCTCAAGGGCACAATCTGTCTCTTCGATGTCGA
CAAGACGCTAACGCCTGCCAGAGCTAATGTTACCCCGGAGATGCTCACGC
TTCTCTCTCAGCTGCGTCACAAGTGCGCGATCGGATTCGTCGGTGGCTCG
AATCTTCCCAAGCAGCAAGAACAGCTCGGTAGAAACACTACGGACGTCAC
AACCCTATTCGATTTCTGCTTCGCTGAGAACGGATTGACCGCTTTCCGCC
TGGGCAAACCTCTTCGCAGCAACAGCTTCATCCAATGGCTGGGAGAGGAG
AAATACCAGAAGTTGGTCAACTTCTTGCTCAAGTACATCGCCAACTTGGA
GATTCCTAAGAAGCGCGGCACTTTCGTTGAATTCCGCAATGGTATGATCA
ACGTCAGCCCGATTGGCAGGAATGCCAGCACCGAGGAGCGGAAGGAATTT
GAAGCGTATGATAAGATTCACAACATCCGCCGAGACCTTGTAGATGCGCT
CAAGAAGGAGTTCCCTGACTATGGTCTAAGCTACTCTATTGGTGGTGAAA
TTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTTACTGCCTACAA
CACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTACAAGACGATCCA
CTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTACGAGATCTACA
GTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTGATGACACCATG
AGGCAGTTGAGGGAGCTCTTCCAGCTCTAGATGGCCACCGAAGCAGCCGG
CGTTTATCCTGCCCTGCAGGACCGCCCCCTCAAGGGCACAATCTGTCTCT
TCGATGTCGACAAGACGCTAACGCCTGCCAGAGCTAATGTTACCCCGGAG
ATGCTCACGCTTCTCTCTCAGCTGCGTCACAAGTGCGCGATCGGATTCGT
CGGTGGCTCGAATCTTCCCAAGCAGCAAGAACAGCTCGGTAGAAACACTA
CGGACGTCACAACCCTATTCGATTTCTGCTTCGCTGAGAACGGATTGACC
GCTTTCCGCCTGGGCAAACCTCTTCGCAGCAACAGCTTCATCCAATGGCT
GGGAGAGGAGAAATACCAGAAGTTGGTCAACTTCTTGCTCAAGTACATCG
CCAACTTGGAGATTCCTAAGAAGCGCGGCACTTTCGTTGAATTCCGCAAT
GGTATGATCAACGTCAGCCCGATTGGCAGGAATGCCAGCACCGAGGAGCG
GAAGGAATTTGAAGCGTATGATAAGATTCACAACATCCGCCGAGACCTTG
TAGATGCGCTCAAGAAGGAGTTCCCTGACTATGGTCTAAGCTACTCTATT
GGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGGACAAGACTTA
CTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGTATCGATTACA
AGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGGTAATGACTAC
GAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTGAGGACCCTGA
TGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAGATGGCCACCG
AAGCAGCCGGCGTTTATCCTGCCCTGCAGGACCGCCCCCTCAAGGGCACA
ATCTGTCTCTTCGATGTCGACAAGACGCTAACGCCTGCCAGAGCTAATGT
TACCCCGGAGATGCTCACGCTTCTCTCTCAGCTGCGTCACAAGTGCGCGA
TCGGATTCGTCGGTGGCTCGAATCTTCCCAAGCAGCAAGAACAGCTCGGT
AGAAACACTACGGACGTCACAACCCTATTCGATTTCTGCTTCGCTGAGAA
CGGATTGACCGCTTTCCGCCTGGGCAAACCTCTTCGCAGCAACAGCTTCA
TCCAATGGCTGGGAGAGGAGAAATACCAGAAGTTGGTCAACTTCTTGCTC
AAGTACATCGCCAACTTGGAGATTCCTAAGAAGCGCGGCACTTTCGTTGA
ATTCCGCAATGGTATGATCAACGTCAGCCCGATTGGCAGGAATGCCAGCA
CCGAGGAGCGGAAGGAATTTGAAGCGTATGATAAGATTCACAACATCCGC
CGAGACCTTGTAGATGCGCTCAAGAAGGAGTTCCCTGACTATGGTCTAAG
CTACTCTATTGGTGGTGAAATTTCTTTTGACGTTTTCCCGACCGGCTGGG
ACAAGACTTACTGCCTACAACACGTCGAAGCCGAGAAAGATATCACGGGT
ATCGATTACAAGACGATCCACTTCTTCGGTGACAAGACATTCCCCGGTGG
TAATGACTACGAGATCTACAGTGACCCTAGGACGATCGGTCACTCCGTTG
AGGACCCTGATGACACCATGAGGCAGTTGAGGGAGCTCTTCCAGCTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009298GDP-mannose biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004615phosphomannomutase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMM1CBS51388_011183Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011183-T1CBS51388_011183-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011183-T1.exon1CBS51388_011183-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_011183-T1.exon2CBS51388_011183-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011183-T1.exon3CBS51388_011183-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011183-T1.exon4CBS51388_011183-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_011183-T1.exon5CBS51388_011183-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011183-T1.cdsCBS51388_011183-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09263YFH
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR043169
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR006379
DBxrefInterPro:IPR005002
DBxrefPFAM:PF03332
ProductPhosphomannomutase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1465980..1467070 +
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