You are here

Home

CBS51388_011194-T1, CBS51388_011194-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011194-T1
Unique NameCBS51388_011194-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1506083..1506988-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011194-T1 ID=CBS51388_011194-T1|Name=CBS51388_011194-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=906bp|location=Sequence derived from alignment at An18:1506083..1506988- (Aspergillus niger CBS 513.88)
ATGAATCACTTTCCCGAAGCTTGGGGTCGCGTAAGAGCATCATCATCATC
GCATTAGATTATTTATGTCGCTAACAAGTTGCTGAAAGCCTAGGGATGAC
GTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAAC
CCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGT
TTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGGTATAGCTGGGAAT
TAGATTGGAAATCCATTTCGCACTTTCACTGACGGATATCCTTTTTTATA
GCATCATACGGGTCTCTTGCCCGCTTCGCTGATGTGAAACGTCTTCGCAA
GTTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATGC
AGTATATCGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTCT
ACCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGAA
AGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATCT
TGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGAT
CTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTGC
CCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTC
TCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTATC
AAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAGC
TGTTATTACTGAAGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAAG
CCCAGAGCTGGGCATTCGCCGAAACCATCAAGGGATATGGGGCTCAGGTT
AACTAG
back to top

Coding sequence (CDS) from alignment at An18:1506083..1506988-

>CBS51388_011194-T1 ID=CBS51388_011194-T1|Name=CBS51388_011194-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2349bp|location=Sequence derived from alignment at An18:1506083..1506988- (Aspergillus niger CBS 513.88)
CATCATACGGGTCTCTTGCCCGCTTCGCTGATGTGAAACGTCTTCGCAAG
TTTGGCGATTCTGCCATCATCGGATTCAGTGGTGACGTTTCGGATATGCA
GTATATCGACCGACTACTGGAGTCCATCGATATCAGAGAAAATTACTCTA
CCCACGGAAACACGTTGAACGCCAAGAACCTTCATACTTATTTGTCGAAA
GTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCCTCTGGAACCACATCTT
GGTGGCCGGGTTTGATGGAGACAAGAAGCCATTCCTCAGTTCTGCGGATC
TGCTGGGGACCACCTTCTCAGCTCCTCATCTCGCGACCGGCTTTGGTGCC
CATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCT
CGAGTCAATCACCAAGGATGAGGCCGTGGCGGCGCTAAGGGAATGTATCA
AGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGACAAGTACTCCTTAGCT
GTTATTACTGAAGAGGGAGTTGAGATTCAGGAGGACCAGCAGGTTGAAGC
CCAGAGCTGGGCATTCGCCGAAACCATCAAGGGATATGGGGCTCAGGTTA
ACTAGCCTAGGGATGACGTTTACGGACCCTACAACGCCTCATACCTCCAG
ACAACTGGTCCGAAAACCCACACTCAGTCACCTGCTGTGACTGGTACGTC
GGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCAATTGCTGCCGATAACC
TAGATGAATCACTTTCCCGAAGCTTGGGGTCGCCATCATACGGGTCTCTT
GCCCGCTTCGCTGATGTGAAACGTCTTCGCAAGTTTGGCGATTCTGCCAT
CATCGGATTCAGTGGTGACGTTTCGGATATGCAGTATATCGACCGACTAC
TGGAGTCCATCGATATCAGAGAAAATTACTCTACCCACGGAAACACGTTG
AACGCCAAGAACCTTCATACTTATTTGTCGAAAGTTTTCTACAAGCGCCG
TTCTGAGTTCAACCCCCTCTGGAACCACATCTTGGTGGCCGGGTTTGATG
GAGACAAGAAGCCATTCCTCAGTTCTGCGGATCTGCTGGGGACCACCTTC
TCAGCTCCTCATCTCGCGACCGGCTTTGGTGCCCATCTTGCCGTTCCAAT
CCTTCGCCGGCTGTTCCCAGAGGAAAGGCCTCTCGAGTCAATCACCAAGG
ATGAGGCCGTGGCGGCGCTAAGGGAATGTATCAAGGTTCTCTGGTACCGT
GATGCGCGGAGTCTGGACAAGTACTCCTTAGCTGTTATTACTGAAGAGGG
AGTTGAGATTCAGGAGGACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCG
CCGAAACCATCAAGGGATATGGGGCTCAGGTTAACTAGCCTAGGGATGAC
GTTTACGGACCCTACAACGCCTCATACCTCCAGACAACTGGTCCGAAAAC
CCACACTCAGTCACCTGCTGTGACTGGTACGTCGGTAGTGGCAGTCAAGT
TTAACGGCGGAGTTGCAATTGCTGCCGATAACCTAGATGAATCACTTTCC
CGAAGCTTGGGGTCGCCATCATACGGGTCTCTTGCCCGCTTCGCTGATGT
GAAACGTCTTCGCAAGTTTGGCGATTCTGCCATCATCGGATTCAGTGGTG
ACGTTTCGGATATGCAGTATATCGACCGACTACTGGAGTCCATCGATATC
AGAGAAAATTACTCTACCCACGGAAACACGTTGAACGCCAAGAACCTTCA
TACTTATTTGTCGAAAGTTTTCTACAAGCGCCGTTCTGAGTTCAACCCCC
TCTGGAACCACATCTTGGTGGCCGGGTTTGATGGAGACAAGAAGCCATTC
CTCAGTTCTGCGGATCTGCTGGGGACCACCTTCTCAGCTCCTCATCTCGC
GACCGGCTTTGGTGCCCATCTTGCCGTTCCAATCCTTCGCCGGCTGTTCC
CAGAGGAAAGGCCTCTCGAGTCAATCACCAAGGATGAGGCCGTGGCGGCG
CTAAGGGAATGTATCAAGGTTCTCTGGTACCGTGATGCGCGGAGTCTGGA
CAAGTACTCCTTAGCTGTTATTACTGAAGAGGGAGTTGAGATTCAGGAGG
ACCAGCAGGTTGAAGCCCAGAGCTGGGCATTCGCCGAAACCATCAAGGGA
TATGGGGCTCAGGTTAACTAGCCTAGGGATGACGTTTACGGACCCTACAA
CGCCTCATACCTCCAGACAACTGGTCCGAAAACCCACACTCAGTCACCTG
CTGTGACTGGTACGTCGGTAGTGGCAGTCAAGTTTAACGGCGGAGTTGCA
ATTGCTGCCGATAACCTAGATGAATCACTTTCCCGAAGCTTGGGGTCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011194CBS51388_011194Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011194-T1CBS51388_011194-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011194-T1.cdsCBS51388_011194-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011194-T1.exon3CBS51388_011194-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011194-T1.exon2CBS51388_011194-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011194-T1.exon1CBS51388_011194-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263XZN
NoteMEROPS:MER0001711
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR016295
DBxrefPFAM:PF00227
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1506083..1506988 -
Powered by Drupal