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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1508890..1509728+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011196-T1 ID=CBS51388_011196-T1|Name=CBS51388_011196-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=839bp|location=Sequence derived from alignment at An18:1508890..1509728+ (Aspergillus niger CBS 513.88)
ATGACGACTCTAGCCGGCAACCCTCTTAGCGAGGCCATCGGATACTCCTT
CTCCAATGCGAATAGTGCTCCCCATAGAGAGCACTCTTTCTATCCGTATG
CGTCACTGTCTTTCACTATATAATAGGGACTAAGCTAACTCACATCGGCA
GCTATACGGATAACGGCGGTTCTACCCTGGGCATTACTGGCTCCGATTTC
GCGATCCTGGCTGGAGATACTCGATCCGTTGCAGGATACAACATCAACTC
CCGTTATGTTCCCAAGGTGTTTAAAATTGGCGGTGATGATGAGTCTGGTG
AAGGTGCCAATATCGTCTTGTCAGTCGTGGGCTTCGCAGCAGATGGCCAG
GCCCTTAAAGAGCGACTAGATGCAGTGGTGAAGATGTACAAATACCAACA
CGGAAAGCCCATGTCCGTGAGAGCCTGTGCCCAACGCTTGTCAACGATTC
TTTACCAGAAACGGTTCTTCCCCTACTATGTGCATGCTATCTTAGCAGGC
TTGGACGAGGATGGTAAGGGTGCCTTGTACAGCTACGATCCGGTTGGATC
GTACGAGAGAGAGCAATGCAGGGCTGCAGGGTCTGCAGCAAGTCTTATCA
TGCCGTTCCTGGATAACCAGGTCAACTTCAAAAACCAATATATCCCGGGC
AGCGGAGAAGGGCATGCCCTTGAGCCCAAGAAAGCGGAGCCACTGCCGAG
AGATACTGTTGAACAGCTGGTACGAGATGCATTCACCAGCGCCGTCGAAA
GACATATTGAGGTCGGAGATGGCTTGCAGATGATGGTTATTACCAGGAGT
GGGGTGGAGGAGATCTACTATCCGTTGAAGAAGGATTAG back to topCoding sequence (CDS) from alignment at An18:1508890..1509728+ >CBS51388_011196-T1 ID=CBS51388_011196-T1|Name=CBS51388_011196-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1566bp|location=Sequence derived from alignment at An18:1508890..1509728+ (Aspergillus niger CBS 513.88)
ATGACGACTCTAGCCGGCAACCCTCTTAGCGAGGCCATCGGATACTCCTT
CTCCAATGCGAATAGTGCTCCCCATAGAGAGCACTCTTTCTATCCCTATA
CGGATAACGGCGGTTCTACCCTGGGCATTACTGGCTCCGATTTCGCGATC
CTGGCTGGAGATACTCGATCCGTTGCAGGATACAACATCAACTCCCGTTA
TGTTCCCAAGGTGTTTAAAATTGGCGGTGATGATGAGTCTGGTGAAGGTG
CCAATATCGTCTTGTCAGTCGTGGGCTTCGCAGCAGATGGCCAGGCCCTT
AAAGAGCGACTAGATGCAGTGGTGAAGATGTACAAATACCAACACGGAAA
GCCCATGTCCGTGAGAGCCTGTGCCCAACGCTTGTCAACGATTCTTTACC
AGAAACGGTTCTTCCCCTACTATGTGCATGCTATCTTAGCAGGCTTGGAC
GAGGATGGTAAGGGTGCCTTGTACAGCTACGATCCGGTTGGATCGTACGA
GAGAGAGCAATGCAGGGCTGCAGGGTCTGCAGCAAGTCTTATCATGCCGT
TCCTGGATAACCAGGTCAACTTCAAAAACCAATATATCCCGGGCAGCGGA
GAAGGGCATGCCCTTGAGCCCAAGAAAGCGGAGCCACTGCCGAGAGATAC
TGTTGAACAGCTGGTACGAGATGCATTCACCAGCGCCGTCGAAAGACATA
TTGAGGTCGGAGATGGCTTGCAGATGATGGTTATTACCAGGAGTGGGGTG
GAGGAGATCTACTATCCGTTGAAGAAGGATTAGATGACGACTCTAGCCGG
CAACCCTCTTAGCGAGGCCATCGGATACTCCTTCTCCAATGCGAATAGTG
CTCCCCATAGAGAGCACTCTTTCTATCCCTATACGGATAACGGCGGTTCT
ACCCTGGGCATTACTGGCTCCGATTTCGCGATCCTGGCTGGAGATACTCG
ATCCGTTGCAGGATACAACATCAACTCCCGTTATGTTCCCAAGGTGTTTA
AAATTGGCGGTGATGATGAGTCTGGTGAAGGTGCCAATATCGTCTTGTCA
GTCGTGGGCTTCGCAGCAGATGGCCAGGCCCTTAAAGAGCGACTAGATGC
AGTGGTGAAGATGTACAAATACCAACACGGAAAGCCCATGTCCGTGAGAG
CCTGTGCCCAACGCTTGTCAACGATTCTTTACCAGAAACGGTTCTTCCCC
TACTATGTGCATGCTATCTTAGCAGGCTTGGACGAGGATGGTAAGGGTGC
CTTGTACAGCTACGATCCGGTTGGATCGTACGAGAGAGAGCAATGCAGGG
CTGCAGGGTCTGCAGCAAGTCTTATCATGCCGTTCCTGGATAACCAGGTC
AACTTCAAAAACCAATATATCCCGGGCAGCGGAGAAGGGCATGCCCTTGA
GCCCAAGAAAGCGGAGCCACTGCCGAGAGATACTGTTGAACAGCTGGTAC
GAGATGCATTCACCAGCGCCGTCGAAAGACATATTGAGGTCGGAGATGGC
TTGCAGATGATGGTTATTACCAGGAGTGGGGTGGAGGAGATCTACTATCC
GTTGAAGAAGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004298 | threonine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926457R |
| Note | MEROPS:MER0005692 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR001353 |
| DBxref | InterPro:IPR029055 |
| DBxref | PFAM:PF00227 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1508890..1509728 + |
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