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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1509993..1510902- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011197-T1 ID=CBS51388_011197-T1|Name=CBS51388_011197-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=910bp|location=Sequence derived from alignment at An18:1509993..1510902- (Aspergillus niger CBS 513.88)
ATGCCTGCACCCACAGCTTTACGGCAAACTGCCGAAGTAGCAATGGCAGA
GACGCCTGTTGCGCCTACTATGTCAGGTCAGTCCCCGCCAGCGCTTTACG
GGAACCCGACTGGGTGGCCATCCTAACGTCCATTAGAGCAAGATGAGGAA
ATTTTGATCGACGCCCAAACGTCGGCAGATCAGGTCTCTGCAGGACTCGC
GCCTGAGATTGAGCCTACTCAAGACAGCGATATGCGTATTGACGAAGAGG
GACGGCCCCTCTTCACACCAGCAAAAGACACTAGCAGGGTATATCGAGTT
GAAAGCAGGAAGGTTCCTGTACCACCGCATAGGATGACTCCATTGAAGGC
TAGCTGGGCACGCATCTATCCCCCGCTTGTCGAACACCTCAAACTTCAAG
TGCGGATGAACATCAAGAACCGAGCTGTGGAGCTACGTACGTCACGATTC
ACGACCGATACGGAAGCCCTGCAGAAGGGCGAGGACTTCGTCAAAGCTTT
TACTCTTGGATTTGATGTCGACGACGCTATCGCACTTCTCAGATTGGATG
ATCTTTACATACGTTCATTCGAGATTCGGGATATCAAAGCCCTTAACGGA
GAGCACCTCAGTCGTGCAATTGGACGCTGTGCTGGTAAAGATGGGCGAAC
AAAGTTTGCTATAGAGAACGCTACTCGGACAAGAATCGTCATTGCAGACC
AGAAGATTCACTTGCTAGGCGCAGTGAAGAATGTCGACTGTGCCCAGCAG
GCCATTGTTAGCTTGATTCTTGGCAGTCCACCGGTCAGTAACCTTGTGCC
AATCCTTTCTATTGTCGTTTCAGAAGATGCAACATCTGCTAACTCCTCAA
TAGGGCAAAGTGTATGGGAACCTTCGTAAGGTGGCTTCTCGCATGAAGGA
GCGTTTTTAA back to topCoding sequence (CDS) from alignment at An18:1509993..1510902- >CBS51388_011197-T1 ID=CBS51388_011197-T1|Name=CBS51388_011197-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2340bp|location=Sequence derived from alignment at An18:1509993..1510902- (Aspergillus niger CBS 513.88)
GGCAAAGTGTATGGGAACCTTCGTAAGGTGGCTTCTCGCATGAAGGAGCG
TTTTTAAAGCAAGATGAGGAAATTTTGATCGACGCCCAAACGTCGGCAGA
TCAGGTCTCTGCAGGACTCGCGCCTGAGATTGAGCCTACTCAAGACAGCG
ATATGCGTATTGACGAAGAGGGACGGCCCCTCTTCACACCAGCAAAAGAC
ACTAGCAGGGTATATCGAGTTGAAAGCAGGAAGGTTCCTGTACCACCGCA
TAGGATGACTCCATTGAAGGCTAGCTGGGCACGCATCTATCCCCCGCTTG
TCGAACACCTCAAACTTCAAGTGCGGATGAACATCAAGAACCGAGCTGTG
GAGCTACGTACGTCACGATTCACGACCGATACGGAAGCCCTGCAGAAGGG
CGAGGACTTCGTCAAAGCTTTTACTCTTGGATTTGATGTCGACGACGCTA
TCGCACTTCTCAGATTGGATGATCTTTACATACGTTCATTCGAGATTCGG
GATATCAAAGCCCTTAACGGAGAGCACCTCAGTCGTGCAATTGGACGCTG
TGCTGGTAAAGATGGGCGAACAAAGTTTGCTATAGAGAACGCTACTCGGA
CAAGAATCGTCATTGCAGACCAGAAGATTCACTTGCTAGGCGCAGTGAAG
AATGTCGACTGTGCCCAGCAGGCCATTGTTAGCTTGATTCTTGGCAGTCC
ACCGATGCCTGCACCCACAGCTTTACGGCAAACTGCCGAAGTAGCAATGG
CAGAGACGCCTGTTGCGCCTACTATGTCAGGGCAAAGTGTATGGGAACCT
TCGTAAGGTGGCTTCTCGCATGAAGGAGCGTTTTTAAAGCAAGATGAGGA
AATTTTGATCGACGCCCAAACGTCGGCAGATCAGGTCTCTGCAGGACTCG
CGCCTGAGATTGAGCCTACTCAAGACAGCGATATGCGTATTGACGAAGAG
GGACGGCCCCTCTTCACACCAGCAAAAGACACTAGCAGGGTATATCGAGT
TGAAAGCAGGAAGGTTCCTGTACCACCGCATAGGATGACTCCATTGAAGG
CTAGCTGGGCACGCATCTATCCCCCGCTTGTCGAACACCTCAAACTTCAA
GTGCGGATGAACATCAAGAACCGAGCTGTGGAGCTACGTACGTCACGATT
CACGACCGATACGGAAGCCCTGCAGAAGGGCGAGGACTTCGTCAAAGCTT
TTACTCTTGGATTTGATGTCGACGACGCTATCGCACTTCTCAGATTGGAT
GATCTTTACATACGTTCATTCGAGATTCGGGATATCAAAGCCCTTAACGG
AGAGCACCTCAGTCGTGCAATTGGACGCTGTGCTGGTAAAGATGGGCGAA
CAAAGTTTGCTATAGAGAACGCTACTCGGACAAGAATCGTCATTGCAGAC
CAGAAGATTCACTTGCTAGGCGCAGTGAAGAATGTCGACTGTGCCCAGCA
GGCCATTGTTAGCTTGATTCTTGGCAGTCCACCGATGCCTGCACCCACAG
CTTTACGGCAAACTGCCGAAGTAGCAATGGCAGAGACGCCTGTTGCGCCT
ACTATGTCAGGGCAAAGTGTATGGGAACCTTCGTAAGGTGGCTTCTCGCA
TGAAGGAGCGTTTTTAAAGCAAGATGAGGAAATTTTGATCGACGCCCAAA
CGTCGGCAGATCAGGTCTCTGCAGGACTCGCGCCTGAGATTGAGCCTACT
CAAGACAGCGATATGCGTATTGACGAAGAGGGACGGCCCCTCTTCACACC
AGCAAAAGACACTAGCAGGGTATATCGAGTTGAAAGCAGGAAGGTTCCTG
TACCACCGCATAGGATGACTCCATTGAAGGCTAGCTGGGCACGCATCTAT
CCCCCGCTTGTCGAACACCTCAAACTTCAAGTGCGGATGAACATCAAGAA
CCGAGCTGTGGAGCTACGTACGTCACGATTCACGACCGATACGGAAGCCC
TGCAGAAGGGCGAGGACTTCGTCAAAGCTTTTACTCTTGGATTTGATGTC
GACGACGCTATCGCACTTCTCAGATTGGATGATCTTTACATACGTTCATT
CGAGATTCGGGATATCAAAGCCCTTAACGGAGAGCACCTCAGTCGTGCAA
TTGGACGCTGTGCTGGTAAAGATGGGCGAACAAAGTTTGCTATAGAGAAC
GCTACTCGGACAAGAATCGTCATTGCAGACCAGAAGATTCACTTGCTAGG
CGCAGTGAAGAATGTCGACTGTGCCCAGCAGGCCATTGTTAGCTTGATTC
TTGGCAGTCCACCGATGCCTGCACCCACAGCTTTACGGCAAACTGCCGAA
GTAGCAATGGCAGAGACGCCTGTTGCGCCTACTATGTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264SQJ |
| DBxref | InterPro:IPR036612 |
| Product | pre-rRNA-processing protein pno1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1509993..1510902 - |
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