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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:1520907..1521818+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011201-T1 ID=CBS51388_011201-T1|Name=CBS51388_011201-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=912bp|location=Sequence derived from alignment at An18:1520907..1521818+ (Aspergillus niger CBS 513.88)
ATGTCACGTCCTGAAGATGTCTTGTAGGTGACCCTTGACGGATTACGAGG
AAATCCAGTGGCCAATATATCACTGACAAAGTGCAACAATTCAAGGCCTC
CGGATCTATTCTATGATGATAATGAGTCCCGAAAATATACTACCTCGTCT
CGTATCCGTAACATCCAGTCCGACATGACCCATCGGGCACTCGACCTCCT
GGACCTGAAATCACCTTCTTTGATACTTGATCTTGGCTGCGGCTCTGGTC
TCTCCGGCGAGATTCTTTCACAGGTGGCTCCCGAAGACGGAGGCCCGCAT
ACTTGGATCGGCATGGACATCTCGCCTAGCATGCTCGATGTTGCCCTCCA
GCGCGGTGTCGATGGCGACCTCTTTCTTGCTGACATCGGGCAAGGTGTGC
CGTTCCGACCAGGAACCTTCGATGCAGCCATTAGTATCAGTGCTATCCAG
TGGCTTTGCAATGCGGAGTCTAGTGATGTTAGTCCGGAGTACCGTCTTCG
TCGCTTCTTTGAGGGCCTCTATGCTAGTCTGCGGCGCGGTGGTCGTGCAG
TTTGCCAGTTTTATCCAAAGAACGACGCTCAGCGGAGCATGATCAGTGGA
GCTGCCATGAAGGCTGGCTTTGGAGCTGGTATACTGGAAGATGACCCGGG
TACAAAAAACAGCAAACTCTATCTCGTGCTCACCGTTGGAGGGGGTGGAT
TACAAGGTGACATCACCGGTGTTGTCAATGGCATGAACGACGTGGATGTT
GTGGACGCCCGGAAACGGGCTATGGAGCGTGGCAAACAAGCATCATCGAG
AAAGGGTGACAAGGCTTGGATTTTGCGAAAAAAGGAGCAGATGACTCGGA
AAGGCAAGGTTGTGAAGGCGAATTCAAAGTACACCGGCAGAAAACGACGT
CCCGCTTTTTGA back to topCoding sequence (CDS) from alignment at An18:1520907..1521818+ >CBS51388_011201-T1 ID=CBS51388_011201-T1|Name=CBS51388_011201-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1680bp|location=Sequence derived from alignment at An18:1520907..1521818+ (Aspergillus niger CBS 513.88)
ATGTCACGTCCTGAAGATGTCTTGCCTCCGGATCTATTCTATGATGATAA
TGAGTCCCGAAAATATACTACCTCGTCTCGTATCCGTAACATCCAGTCCG
ACATGACCCATCGGGCACTCGACCTCCTGGACCTGAAATCACCTTCTTTG
ATACTTGATCTTGGCTGCGGCTCTGGTCTCTCCGGCGAGATTCTTTCACA
GGTGGCTCCCGAAGACGGAGGCCCGCATACTTGGATCGGCATGGACATCT
CGCCTAGCATGCTCGATGTTGCCCTCCAGCGCGGTGTCGATGGCGACCTC
TTTCTTGCTGACATCGGGCAAGGTGTGCCGTTCCGACCAGGAACCTTCGA
TGCAGCCATTAGTATCAGTGCTATCCAGTGGCTTTGCAATGCGGAGTCTA
GTGATGTTAGTCCGGAGTACCGTCTTCGTCGCTTCTTTGAGGGCCTCTAT
GCTAGTCTGCGGCGCGGTGGTCGTGCAGTTTGCCAGTTTTATCCAAAGAA
CGACGCTCAGCGGAGCATGATCAGTGGAGCTGCCATGAAGGCTGGCTTTG
GAGCTGGTATACTGGAAGATGACCCGGGTACAAAAAACAGCAAACTCTAT
CTCGTGCTCACCGTTGGAGGGGGTGGATTACAAGGTGACATCACCGGTGT
TGTCAATGGCATGAACGACGTGGATGTTGTGGACGCCCGGAAACGGGCTA
TGGAGCGTGGCAAACAAGCATCATCGAGAAAGGGTGACAAGGCTTGGATT
TTGCGAAAAAAGGAGCAGATGACTCGGAAAGGCAAGGTTGTGAAGGCGAA
TTCAAAGTACACCGGCAGAAAACGACGTCCCGCTTTTTGAATGTCACGTC
CTGAAGATGTCTTGCCTCCGGATCTATTCTATGATGATAATGAGTCCCGA
AAATATACTACCTCGTCTCGTATCCGTAACATCCAGTCCGACATGACCCA
TCGGGCACTCGACCTCCTGGACCTGAAATCACCTTCTTTGATACTTGATC
TTGGCTGCGGCTCTGGTCTCTCCGGCGAGATTCTTTCACAGGTGGCTCCC
GAAGACGGAGGCCCGCATACTTGGATCGGCATGGACATCTCGCCTAGCAT
GCTCGATGTTGCCCTCCAGCGCGGTGTCGATGGCGACCTCTTTCTTGCTG
ACATCGGGCAAGGTGTGCCGTTCCGACCAGGAACCTTCGATGCAGCCATT
AGTATCAGTGCTATCCAGTGGCTTTGCAATGCGGAGTCTAGTGATGTTAG
TCCGGAGTACCGTCTTCGTCGCTTCTTTGAGGGCCTCTATGCTAGTCTGC
GGCGCGGTGGTCGTGCAGTTTGCCAGTTTTATCCAAAGAACGACGCTCAG
CGGAGCATGATCAGTGGAGCTGCCATGAAGGCTGGCTTTGGAGCTGGTAT
ACTGGAAGATGACCCGGGTACAAAAAACAGCAAACTCTATCTCGTGCTCA
CCGTTGGAGGGGGTGGATTACAAGGTGACATCACCGGTGTTGTCAATGGC
ATGAACGACGTGGATGTTGTGGACGCCCGGAAACGGGCTATGGAGCGTGG
CAAACAAGCATCATCGAGAAAGGGTGACAAGGCTTGGATTTTGCGAAAAA
AGGAGCAGATGACTCGGAAAGGCAAGGTTGTGAAGGCGAATTCAAAGTAC
ACCGGCAGAAAACGACGTCCCGCTTTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0070476 | rRNA (guanine-N7)-methylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
| GO:0016435 | rRNA (guanine) methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646EZ |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR013216 |
| DBxref | InterPro:IPR022238 |
| DBxref | PFAM:PF12589 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:1520907..1521818 + |
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