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CBS51388_011202-T1, CBS51388_011202-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011202-T1
Unique NameCBS51388_011202-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1522466..1523745-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011202-T1 ID=CBS51388_011202-T1|Name=CBS51388_011202-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1280bp|location=Sequence derived from alignment at An18:1522466..1523745- (Aspergillus niger CBS 513.88)
ATGTGCGTCAGCCCTTCCATTCGCATGCAGTACCGTACTGCTAGAGACAC
ATGGTTTATTGACTCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATA
TCTTCAAGCCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCA
GGTACCTACATTCGTCTCTTTCACAACTTGATCATTTTGCTGATGCTTCG
GTGATTCGCTTTCTTAAAGGTGACGGAATCGGAGCCGAGGTTGCTGAATC
GGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGG
TAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTC
AAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTAT
CCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTC
TCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATT
CCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGA
GAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGG
TTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCC
AAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTG
CATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCA
CCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATG
ATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGA
CGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACATTGGTT
CTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGC
GACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAA
GGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGC
TTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCC
GTCTATGATGTGATCGGTGAGGGGTGAGTTTCAGACTTTTGTTTCAACCT
TCCAGCTTGATTCAGAGCTGTCGCTAATGCGAAATTCTCTAGTAAAACGA
GGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCA
GTCTTGGATAAGATGGAGGCTGCTCTGTAA
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Coding sequence (CDS) from alignment at An18:1522466..1523745-

>CBS51388_011202-T1 ID=CBS51388_011202-T1|Name=CBS51388_011202-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3429bp|location=Sequence derived from alignment at An18:1522466..1523745- (Aspergillus niger CBS 513.88)
TAAAACGAGGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTTCA
CCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCG
GAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTT
CCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAA
ACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACA
AGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCAC
CAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTAT
CGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTG
ATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAA
CACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGC
CAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACA
ACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCG
GATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGAC
TTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTT
CCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTGTACGGTGGC
ATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCC
TGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTC
ACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATG
ATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGC
CAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGT
CAGCCCTTCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTA
TTGACTCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAG
CCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTAAAACG
AGGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGC
AGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGA
GGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCG
AGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCA
GAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGG
TCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGT
TCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTC
ATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTG
CATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGT
CCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCT
GAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAA
GAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTC
TTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAG
GTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCC
CCAGCAGTTCGACGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTCT
CCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGC
AACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGG
CCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTT
CTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGC
ATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGTCAGCCCT
TCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGACTC
TATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTA
AGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTAAAACGAGGACCC
GCGACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTG
GATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCT
GAATCGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGA
GCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGC
TTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAG
GGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGT
TGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGA
ACATTCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATC
CGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCA
GGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCA
TTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTT
ACTTGCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCG
TAGCACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACG
ACATGATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAG
TTCGACGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACAT
TGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGG
GCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGAC
ATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTC
TATGCTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCA
AGGCCGTCTATGATGTGATCGGTGAGGGATGTGCGTCAGCCCTTCCATTC
GCATGCAGTACCGTACTGCTAGAGACACATGGTTTATTGACTCTATAACT
CAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGG
CGGCAAATACACCGTCACTCTTATCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH1CBS51388_011202Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011202-T1CBS51388_011202-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011202-T1.cdsCBS51388_011202-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011202-T1.exon3CBS51388_011202-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011202-T1.exon2CBS51388_011202-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011202-T1.exon1CBS51388_011202-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004434
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Productisocitrate dehydrogenase (NAD( )) idh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1522466..1523745 -
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