You are here

CBS51388_011204-T1, CBS51388_011204-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011204-T1
Unique NameCBS51388_011204-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1526542..1527506-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011204-T1 ID=CBS51388_011204-T1|Name=CBS51388_011204-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=965bp|location=Sequence derived from alignment at An18:1526542..1527506- (Aspergillus niger CBS 513.88)
ATGTCTTCATCCATATTGCATAGCTGCCCCTGCTGTGGGCAAGTTACAGA TATCTCCAATGCACTTGCTGCTTTCATCGAAAACCCCTATTGTAGCCAGG TAGATACTTCATATATCTAACTTTATGATTCCATAAGCTCTCTGACCAGA GAATCATGCAGTGCGGATTGTCCGCTTCTGAAAGCGATTTGAAATTACAA AATGATCTCTCAGCACTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTT ATCACCCGAAGGGAGCGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAA TTGTGTATAGCATCACGCAACATTACCATCATTCTGCGCATGTTGCTCAA CAGAATGCTACTCGTTCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGC TGCCGTCAACGAGACACTCCGACAGCACAACGTGGACCCCTCAACACTCT CAGCCAAGCAGACGGAGCTTTTTGAACATGCCATCCCAGAACAACAATCA CGCCTCATCCAGATGTGGCAGATCTCCCCAGAGCACAGCTATGCAGCAAC TGGTCACGCCAGCGAAACCAGATTGCTGAACCAGGAAAGGTCGAATGTAG CCAGTGCTGTTGGCCATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGT GGTGATCGTGAAATGTGCGATGTACCTGACCGGAATGAGAATGGAGATGA TGGACACCTGTATGCTGAGCCATATATGGTAACTGGATATGAGGCGATAG CCCAGGAAAGGAATGGAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCT GAACCAACAACCGGATCACCATACAAGCTTTCGAGTGACCCTATTTACTA TGCTCACTGTCGAAGATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGT ATCAATACGGTCTATTCGACGAGATGAACCGTCATTCCCATTGCGGCTTA GTGCAACCTCGTTAG
back to top

Coding sequence (CDS) from alignment at An18:1526542..1527506-

>CBS51388_011204-T1 ID=CBS51388_011204-T1|Name=CBS51388_011204-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1806bp|location=Sequence derived from alignment at An18:1526542..1527506- (Aspergillus niger CBS 513.88)
TGCGGATTGTCCGCTTCTGAAAGCGATTTGAAATTACAAAATGATCTCTC
AGCACTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTTATCACCCGAAG
GGAGCGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAATTGTGTATAGC
ATCACGCAACATTACCATCATTCTGCGCATGTTGCTCAACAGAATGCTAC
TCGTTCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGCTGCCGTCAACG
AGACACTCCGACAGCACAACGTGGACCCCTCAACACTCTCAGCCAAGCAG
ACGGAGCTTTTTGAACATGCCATCCCAGAACAACAATCACGCCTCATCCA
GATGTGGCAGATCTCCCCAGAGCACAGCTATGCAGCAACTGGTCACGCCA
GCGAAACCAGATTGCTGAACCAGGAAAGGTCGAATGTAGCCAGTGCTGTT
GGCCATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGTGGTGATCGTGA
AATGTGCGATGTACCTGACCGGAATGAGAATGGAGATGATGGACACCTGT
ATGCTGAGCCATATATGGTAACTGGATATGAGGCGATAGCCCAGGAAAGG
AATGGAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCTGAACCAACAAC
CGGATCACCATACAAGCTTTCGAGTGACCCTATTTACTATGCTCACTGTC
GAAGATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGTATCAATACGGT
CTATTCGACGAGATGAACCGTCATTCCCATTGCGGCTTAGTGCAACCTCG
TTAGATGTCTTCATCCATATTGCATAGCTGCCCCTGCTGTGGGCAAGTTA
CAGATATCTCCAATGCACTTGCTGCTTTCATCGAAAACCCCTATTGTAGC
CAGTGCGGATTGTCCGCTTCTGAAAGCGATTTGAAATTACAAAATGATCT
CTCAGCACTTTTCGAAAAGCAAATGAACCTAGAGATGCCGTTATCACCCG
AAGGGAGCGTGGGAGCACAGCGGCCTGCTCCCTCATCCCCAATTGTGTAT
AGCATCACGCAACATTACCATCATTCTGCGCATGTTGCTCAACAGAATGC
TACTCGTTCCTCAGAAGGAGTTCCTCGCCGCGACCCCAATGCTGCCGTCA
ACGAGACACTCCGACAGCACAACGTGGACCCCTCAACACTCTCAGCCAAG
CAGACGGAGCTTTTTGAACATGCCATCCCAGAACAACAATCACGCCTCAT
CCAGATGTGGCAGATCTCCCCAGAGCACAGCTATGCAGCAACTGGTCACG
CCAGCGAAACCAGATTGCTGAACCAGGAAAGGTCGAATGTAGCCAGTGCT
GTTGGCCATGCCCCGACTCCGTTGGATTGGGCAGCCACAGGTGGTGATCG
TGAAATGTGCGATGTACCTGACCGGAATGAGAATGGAGATGATGGACACC
TGTATGCTGAGCCATATATGGTAACTGGATATGAGGCGATAGCCCAGGAA
AGGAATGGAGTCCCTGCAGCTCAGCCCGCACACCTCGTGGCTGAACCAAC
AACCGGATCACCATACAAGCTTTCGAGTGACCCTATTTACTATGCTCACT
GTCGAAGATGGTGGGAACCTACACAGCAGAGTTCGGTAGAGTATCAATAC
GGTCTATTCGACGAGATGAACCGTCATTCCCATTGCGGCTTAGTGCAACC
TCGTTAGATGTCTTCATCCATATTGCATAGCTGCCCCTGCTGTGGGCAAG
TTACAGATATCTCCAATGCACTTGCTGCTTTCATCGAAAACCCCTATTGT
AGCCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011204CBS51388_011204Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011204-T1CBS51388_011204-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011204-T1.cdsCBS51388_011204-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011204-T1.exon2CBS51388_011204-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011204-T1.exon1CBS51388_011204-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1526542..1527506 -