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CBS51388_011206-T1, CBS51388_011206-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011206-T1
Unique NameCBS51388_011206-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An18:1530003..1530785-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011206-T1 ID=CBS51388_011206-T1|Name=CBS51388_011206-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=783bp|location=Sequence derived from alignment at An18:1530003..1530785- (Aspergillus niger CBS 513.88)
ATGACTTCTCTGTCTCTGAAAGGCCCAGGCGCTGCGCAGACATACGATGG
TAATAACCTCTTTCAGGATGATCGTATGATTAATGATCCGTCTGCTAAAT
GATGGAATCTTAGGGGCTGGGCTACGAATCGCCATTGTCCATGCGAGGTG
GAATATGGGCATAATTGGTCCTCTCGTGGATGGGGCTAAGCGGAGCCTCC
TTGCAGCTGGAGTTTCTGAGAATAACATAACCATCCACACTGTTCCAGGC
AGTTATGAGTTGCCCTTCGCCGTGCAGAAGTAAGCATATTGTCATCATGT
CTTTTCCTTCTCGGGCATTTCATTGGAGACTTCGGAGACTGATGCTGACT
TTTGTACGCTGTCAGGTTATACGCGGCTTCCCAGATTGAAGCTTCCAAAG
GCTCAGCCTCGGCGCAAGGCATCAGTGCCACCGATTTGCTGTCCTCCTCT
ACAGCGGACCTCACGAAGGCATCTCCACAGTCGCCATCTTCCGATACGCC
TAGACCTTTTGATGCCATCATTGCCGTTGGAGTGCTGATTAAAGGGGAGA
CTATGCATTTCGAATACATCGCGGATGCCGTCTCTCATGGATTGATGCGT
GTGCAGCTCGATACGGGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCTT
GACTGAAGAGCAAGGCTTGGAAAGAGCCGGCATGGGCAAAAAGGGGATGC
ACAACCATGGAGAGGACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAAG
AGAAGAGACTGGGCTGAGGGTAAAGTTGTTTAG
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Coding sequence (CDS) from alignment at An18:1530003..1530785-

>CBS51388_011206-T1 ID=CBS51388_011206-T1|Name=CBS51388_011206-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1899bp|location=Sequence derived from alignment at An18:1530003..1530785- (Aspergillus niger CBS 513.88)
GTTATACGCGGCTTCCCAGATTGAAGCTTCCAAAGGCTCAGCCTCGGCGC
AAGGCATCAGTGCCACCGATTTGCTGTCCTCCTCTACAGCGGACCTCACG
AAGGCATCTCCACAGTCGCCATCTTCCGATACGCCTAGACCTTTTGATGC
CATCATTGCCGTTGGAGTGCTGATTAAAGGGGAGACTATGCATTTCGAAT
ACATCGCGGATGCCGTCTCTCATGGATTGATGCGTGTGCAGCTCGATACG
GGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCTTGACTGAAGAGCAAGG
CTTGGAAAGAGCCGGCATGGGCAAAAAGGGGATGCACAACCATGGAGAGG
ACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAAGAGAAGAGACTGGGCT
GAGGGTAAAGTTGTTTAGGGGCTGGGCTACGAATCGCCATTGTCCATGCG
AGGTGGAATATGGGCATAATTGGTCCTCTCGTGGATGGGGCTAAGCGGAG
CCTCCTTGCAGCTGGAGTTTCTGAGAATAACATAACCATCCACACTGTTC
CAGGCAGTTATGAGTTGCCCTTCGCCGTGCAGAAATGACTTCTCTGTCTC
TGAAAGGCCCAGGCGCTGCGCAGACATACGATGGTTATACGCGGCTTCCC
AGATTGAAGCTTCCAAAGGCTCAGCCTCGGCGCAAGGCATCAGTGCCACC
GATTTGCTGTCCTCCTCTACAGCGGACCTCACGAAGGCATCTCCACAGTC
GCCATCTTCCGATACGCCTAGACCTTTTGATGCCATCATTGCCGTTGGAG
TGCTGATTAAAGGGGAGACTATGCATTTCGAATACATCGCGGATGCCGTC
TCTCATGGATTGATGCGTGTGCAGCTCGATACGGGAGTGCCGGTCATCTT
TGGCGTGCTTACTGTCTTGACTGAAGAGCAAGGCTTGGAAAGAGCCGGCA
TGGGCAAAAAGGGGATGCACAACCATGGAGAGGACTGGGGTAATGCTGCA
GTAGAACTTGGAGCAAAGAGAAGAGACTGGGCTGAGGGTAAAGTTGTTTA
GGGGCTGGGCTACGAATCGCCATTGTCCATGCGAGGTGGAATATGGGCAT
AATTGGTCCTCTCGTGGATGGGGCTAAGCGGAGCCTCCTTGCAGCTGGAG
TTTCTGAGAATAACATAACCATCCACACTGTTCCAGGCAGTTATGAGTTG
CCCTTCGCCGTGCAGAAATGACTTCTCTGTCTCTGAAAGGCCCAGGCGCT
GCGCAGACATACGATGGTTATACGCGGCTTCCCAGATTGAAGCTTCCAAA
GGCTCAGCCTCGGCGCAAGGCATCAGTGCCACCGATTTGCTGTCCTCCTC
TACAGCGGACCTCACGAAGGCATCTCCACAGTCGCCATCTTCCGATACGC
CTAGACCTTTTGATGCCATCATTGCCGTTGGAGTGCTGATTAAAGGGGAG
ACTATGCATTTCGAATACATCGCGGATGCCGTCTCTCATGGATTGATGCG
TGTGCAGCTCGATACGGGAGTGCCGGTCATCTTTGGCGTGCTTACTGTCT
TGACTGAAGAGCAAGGCTTGGAAAGAGCCGGCATGGGCAAAAAGGGGATG
CACAACCATGGAGAGGACTGGGGTAATGCTGCAGTAGAACTTGGAGCAAA
GAGAAGAGACTGGGCTGAGGGTAAAGTTGTTTAGGGGCTGGGCTACGAAT
CGCCATTGTCCATGCGAGGTGGAATATGGGCATAATTGGTCCTCTCGTGG
ATGGGGCTAAGCGGAGCCTCCTTGCAGCTGGAGTTTCTGAGAATAACATA
ACCATCCACACTGTTCCAGGCAGTTATGAGTTGCCCTTCGCCGTGCAGAA
ATGACTTCTCTGTCTCTGAAAGGCCCAGGCGCTGCGCAGACATACGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0009349riboflavin synthase complex
Vocabulary: Molecular Function
TermDefinition
GO:00009066,7-dimethyl-8-ribityllumazine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011206CBS51388_011206Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011206-T1CBS51388_011206-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011206-T1.cdsCBS51388_011206-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011206-T1.exon3CBS51388_011206-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_011206-T1.exon2CBS51388_011206-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011206-T1.exon1CBS51388_011206-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264OYZ
DBxrefInterPro:IPR034964
DBxrefInterPro:IPR036467
DBxrefInterPro:IPR002180
DBxrefPFAM:PF00885
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An18supercontigAn18:1530003..1530785 -
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