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Sequences
The following sequences are available for this feature:
mRNA from alignment at An19:39355..40424- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011219-T1 ID=CBS51388_011219-T1|Name=CBS51388_011219-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1070bp|location=Sequence derived from alignment at An19:39355..40424- (Aspergillus niger CBS 513.88)
ATGTCCTCCCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGG
AGCCAGCTGGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAA
CAGACCCAGCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAG
TATTGCTCCGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAA
GAATTACACATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACA
TGATTCAAGAAGTCAGTGGCCGGTCATCCTTAGAGCTCCTCTGCAGTTCG
TCATGCATGCTAACTATTATGATAGAATGGGCCAGAAAGACTAGACTTCA
AACGCCGTCTATTCGCGCACTTGGACGCAAAGACCCCTTCCCATATCCTC
ATCGCATCCTCCTCCTCCGGCCTTCCGTCGTCAGAATTTGTCACAGAATG
CACAAATAACCCATCTCGAATCCTCATCGGTCACCCTTTCAACCCTCCCC
ACTTAGTACCTCTGGTCGAGGTCGTGCCTCATCCAGGAACAAGCCAAGAC
TATGTGGCGGCTGCATACCAATTCTACAAGGGTCTAGACAAGGATCCGGT
GATTGTGAATCAAGAAACTCCTGGCTTTATCGCCAACCGGTTACAAGCCG
CAATGTGTGCCGAGGCATACAGCCTCGTTACACGAAGGATTGTCTCTGCA
GAAGACCTGGGTGAGCATTAATCTTCCTCCTGTTGCAATATGGAAGAACT
TCTAATGGCGTATAGACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGG
GCGCTGACAGGGCCAATTATGACGAATACCCTCGGCGGCGGGGGAGACTT
CACCCATTTTATGGATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACG
ATATGGAACAGAATAAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGC
TTGAAGAAGAACGTCAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGT
TGAGGGGGATCGTGATGTGCTGTTGACTGAATTGGTGAAGCGTAAACTGG
ACCAAACGGAGAATCAATAG back to topCoding sequence (CDS) from alignment at An19:39355..40424- >CBS51388_011219-T1 ID=CBS51388_011219-T1|Name=CBS51388_011219-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2853bp|location=Sequence derived from alignment at An19:39355..40424- (Aspergillus niger CBS 513.88)
ACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCCA
ATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGGA
TCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAATA
AATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGTC
AATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTGA
TGTGCTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAATC
AATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGCAC
TTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCCGG
CCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCGAA
TCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCGAG
GTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATACCA
ATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAACTC
CTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCATAC
AGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTCCC
CAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCTGG
ACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCAGC
GCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTCCG
CAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACACA
TTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAAGA
AACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGCC
AATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATGG
ATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAAT
AAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACGT
CAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGTG
ATGTGCTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAAT
CAATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGCA
CTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCCG
GCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCGA
ATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCGA
GGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATACC
AATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAACT
CCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCATA
CAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTCC
CCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCTG
GACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCAG
CGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTCC
GCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACAC
ATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAAG
AAACAAAACTGTCACTTCCGGCCTCGGCCTGCGGTGGGCGCTGACAGGGC
CAATTATGACGAATACCCTCGGCGGCGGGGGAGACTTCACCCATTTTATG
GATCATTTGGGCCCGGCGTTGAAGTCGTGGGTCGACGATATGGAACAGAA
TAAATTTGACTTGGGATCCGAGGAGCAAGTTGATGGCTTGAAGAAGAACG
TCAATGGGTGGACATCGCAAGTCGACCTGAAGAAGGTTGAGGGGGATCGT
GATGTGCTGTTGACTGAATTGGTGAAGCGTAAACTGGACCAAACGGAGAA
TCAATAGAATGGGCCAGAAAGACTAGACTTCAAACGCCGTCTATTCGCGC
ACTTGGACGCAAAGACCCCTTCCCATATCCTCATCGCATCCTCCTCCTCC
GGCCTTCCGTCGTCAGAATTTGTCACAGAATGCACAAATAACCCATCTCG
AATCCTCATCGGTCACCCTTTCAACCCTCCCCACTTAGTACCTCTGGTCG
AGGTCGTGCCTCATCCAGGAACAAGCCAAGACTATGTGGCGGCTGCATAC
CAATTCTACAAGGGTCTAGACAAGGATCCGGTGATTGTGAATCAAGAAAC
TCCTGGCTTTATCGCCAACCGGTTACAAGCCGCAATGTGTGCCGAGGCAT
ACAGCCTCGTTACACGAAGGATTGTCTCTGCAGAAGACCTGGATGTCCTC
CCCAATCAAAACGGTCGGCGTGATCGGCGCAGGCGTGATCGGAGCCAGCT
GGACAGCACTCTTCCTTGCCAAGGGCCTCCAAGTGATTGTAACAGACCCA
GCGCCAGGAGCTGGGGCAAAGCTGCGTGGTTACTTGCAGGAGTATTGCTC
CGCAGTACCTAATGCTATGGTTGCTCCTGCCGCTTGTCTGAAGAATTACA
CATTCGTCAAGGACATTGAGCCTTACCTCGGAAGCCTAGACATGATTCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006631 | fatty acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR006176 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An19 | supercontig | An19:39355..40424 - |
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