You are here

Home

CBS51388_011225-T1, CBS51388_011225-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_011225-T1
Unique NameCBS51388_011225-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An19:51269..51771-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_011225-T1 ID=CBS51388_011225-T1|Name=CBS51388_011225-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=503bp|location=Sequence derived from alignment at An19:51269..51771- (Aspergillus niger CBS 513.88)
ATGCCTGCAGCCGGCCCCATGGACGACCAATGGGTCTCTTTCCACATCCG
GGACCACCTGGAGAAGGGCGAGATCACCGTCCGACACACCGTCATCGAAG
GGTATGGAAACTCTTCATTGAAACTGCACTCAATTGAAACTCTTCTCTTG
TATACTAACTGATATCTCATGATAGTGGTGAATTCCACGACCCCAACAAC
CGCAGACAGTCCCTCACCGAAGACGAGATCGATGAAATCACCATCCCCTC
GTACGGCATCGGTGAGATCTGTGCTCGTGGTCGCCGCGGCAGCGAGGGCC
GGCTGGACCTCTTCCACGACGAGGAAAAGATCTGCGAATTGCACTGGGAT
AATCGCCAGGGCAATCCTGTCAACATCGTCGAGATGCTGGACAGTAATAG
CAAGTATCGTGTCGAACATGGGGGATGGAGCCCAGAGGCTGGACCTCTGG
GCCACGTCTACATCGACATTTTGGAGCAGCAGAAGAAGAAGAATAGCAAA
TAA
back to top

Coding sequence (CDS) from alignment at An19:51269..51771-

>CBS51388_011225-T1 ID=CBS51388_011225-T1|Name=CBS51388_011225-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=858bp|location=Sequence derived from alignment at An19:51269..51771- (Aspergillus niger CBS 513.88)
TGGTGAATTCCACGACCCCAACAACCGCAGACAGTCCCTCACCGAAGACG
AGATCGATGAAATCACCATCCCCTCGTACGGCATCGGTGAGATCTGTGCT
CGTGGTCGCCGCGGCAGCGAGGGCCGGCTGGACCTCTTCCACGACGAGGA
AAAGATCTGCGAATTGCACTGGGATAATCGCCAGGGCAATCCTGTCAACA
TCGTCGAGATGCTGGACAGTAATAGCAAGTATCGTGTCGAACATGGGGGA
TGGAGCCCAGAGGCTGGACCTCTGGGCCACGTCTACATCGACATTTTGGA
GCAGCAGAAGAAGAAGAATAGCAAATAAATGCCTGCAGCCGGCCCCATGG
ACGACCAATGGGTCTCTTTCCACATCCGGGACCACCTGGAGAAGGGCGAG
ATCACCGTCCGACACACCGTCATCGAAGGTGGTGAATTCCACGACCCCAA
CAACCGCAGACAGTCCCTCACCGAAGACGAGATCGATGAAATCACCATCC
CCTCGTACGGCATCGGTGAGATCTGTGCTCGTGGTCGCCGCGGCAGCGAG
GGCCGGCTGGACCTCTTCCACGACGAGGAAAAGATCTGCGAATTGCACTG
GGATAATCGCCAGGGCAATCCTGTCAACATCGTCGAGATGCTGGACAGTA
ATAGCAAGTATCGTGTCGAACATGGGGGATGGAGCCCAGAGGCTGGACCT
CTGGGCCACGTCTACATCGACATTTTGGAGCAGCAGAAGAAGAAGAATAG
CAAATAAATGCCTGCAGCCGGCCCCATGGACGACCAATGGGTCTCTTTCC
ACATCCGGGACCACCTGGAGAAGGGCGAGATCACCGTCCGACACACCGTC
ATCGAAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019836hemolysis by symbiont of host erythrocytes
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_011225CBS51388_011225Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011225-T1CBS51388_011225-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011225-T1.cdsCBS51388_011225-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_011225-T1.exon2CBS51388_011225-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_011225-T1.exon1CBS51388_011225-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR009413
DBxrefPFAM:PF06355
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An19supercontigAn19:51269..51771 -
Powered by Drupal