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CAN33_0090-T1, CAN33_0090-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0090-T1
Unique NameCAN33_0090-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:28953..30052+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0090-T1 ID=CAN33_0090-T1|Name=CAN33_0090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1100bp|location=Sequence derived from alignment at NKJJ01000004.1:28953..30052+ (Aspergillus niger FDAARGOS_311)
ATGTCGAGTGAGAAGGAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTGTAAGTGTCCCCTT
TCCCCTCCCCCTATGAACTGCTGCTGGACATCTCATCCTGAACGCGATCT
CACACACACTCACGCACAGCACCGCTTTCCAACCGCTGTATGGCCAGTTG
GCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATCGGGGCCGTGGCAATATT
TGCATTGGGCAGTGGCATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGC
TGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATG
ACACAGTTGGTCATTAGTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTT
CATGGCCATCATCTTCACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGT
TTATTGGGGGCGCGCTGGTCGACAACACCACCTGGCGCTGGGTGTTCTAC
ATCAACTTACCCATCGCCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCT
GCAGGTCCATTTCCAGCGGCGACTCACGGTGCGACAGAAGATGAGCCGCA
TCGACTTCGTGGGTAATGCCATTCTGATTGCCTCGGTCACCTCCGTCCTC
ATTGCCCTCTCCTGGGGCGGATCCCGGTATAGCTGGCGCTCCTGGCATGT
GCTGGTTCCCCTCTTGGTCGGATTTGCGGGCACGGGCTTCTTTCACTTCT
ACGAAAGTACCCGCTTCTGCAAGGAGCCCACGTTGCCGACACGTATCCTC
GCCAATAACCGGACCACCTCCATTGTTCTCTTCTGTTCATTCTGCCAGTT
TCTGCTGTCCTTCTGGACCATCTACTTCCTGCCCATCTACTTCCAGGGCG
TCCTCCTCGTCTCCCCGAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:28953..30052+

>CAN33_0090-T1 ID=CAN33_0090-T1|Name=CAN33_0090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2034bp|location=Sequence derived from alignment at NKJJ01000004.1:28953..30052+ (Aspergillus niger FDAARGOS_311)
ATGTCGAGTGAGAAGGAAACCGCCCCGAATGCTCCCTCCCCTCCAGCACC
ACCGCCACCGTCAGATCCTCCGCGGCGAGATTGGCGCTTTTGGGCCATTT
TCCCTCCGCTATGCGTGGCTACATTACTGTCAGCGCTAGAATCTACGGTC
GTGTCGACGGCCCTGCCCTCCATTGTGGATGATCTCCACTCGGGAAATCT
GTACATCTGGTTTGTCAATGGCTACTTCTTAACTTTCACCGCTTTCCAAC
CGCTGTATGGCCAGTTGGCCCAAGTGTTCGGCCGGCGCTGGCTGCTGATC
GGGGCCGTGGCAATATTTGCATTGGGCAGTGGCATCAGCGGCGGTGCCAG
CAGCTCAGCCATGCTGCTGGTTGGTCGAGTCCTTCAAGGCGCAGGTGGCG
GCGGCATCAGTCTCATGACACAGTTGGTCATTAGTGACCTGGTGTCGGTG
CGTGAACGAGGCAAGTTCATGGCCATCATCTTCACCACCTTCTCGCTGGG
GACCTCGCTGGGCCCGTTTATTGGGGGCGCGCTGGTCGACAACACCACCT
GGCGCTGGGTGTTCTACATCAACTTACCCATCGCCGGCGCCGCCCTCGTC
TTGCTGTACTTCTTTCTGCAGGTCCATTTCCAGCGGCGACTCACGGTGCG
ACAGAAGATGAGCCGCATCGACTTCGTGGGTAATGCCATTCTGATTGCCT
CGGTCACCTCCGTCCTCATTGCCCTCTCCTGGGGCGGATCCCGGTATAGC
TGGCGCTCCTGGCATGTGCTGGTTCCCCTCTTGGTCGGATTTGCGGGCAC
GGGCTTCTTTCACTTCTACGAAAGTACCCGCTTCTGCAAGGAGCCCACGT
TGCCGACACGTATCCTCGCCAATAACCGGACCACCTCCATTGTTCTCTTC
TGTTCATTCTGCCAGTTTCTGCTGTCCTTCTGGACCATCTACTTCCTGCC
CATCTACTTCCAGGGCGTCCTCCTCGTCTCCCCGAGCGCAGTGGCGTCTT
ACTCCTCCCGTTTGTGAATGTCGAGTGAGAAGGAAACCGCCCCGAATGCT
CCCTCCCCTCCAGCACCACCGCCACCGTCAGATCCTCCGCGGCGAGATTG
GCGCTTTTGGGCCATTTTCCCTCCGCTATGCGTGGCTACATTACTGTCAG
CGCTAGAATCTACGGTCGTGTCGACGGCCCTGCCCTCCATTGTGGATGAT
CTCCACTCGGGAAATCTGTACATCTGGTTTGTCAATGGCTACTTCTTAAC
TTTCACCGCTTTCCAACCGCTGTATGGCCAGTTGGCCCAAGTGTTCGGCC
GGCGCTGGCTGCTGATCGGGGCCGTGGCAATATTTGCATTGGGCAGTGGC
ATCAGCGGCGGTGCCAGCAGCTCAGCCATGCTGCTGGTTGGTCGAGTCCT
TCAAGGCGCAGGTGGCGGCGGCATCAGTCTCATGACACAGTTGGTCATTA
GTGACCTGGTGTCGGTGCGTGAACGAGGCAAGTTCATGGCCATCATCTTC
ACCACCTTCTCGCTGGGGACCTCGCTGGGCCCGTTTATTGGGGGCGCGCT
GGTCGACAACACCACCTGGCGCTGGGTGTTCTACATCAACTTACCCATCG
CCGGCGCCGCCCTCGTCTTGCTGTACTTCTTTCTGCAGGTCCATTTCCAG
CGGCGACTCACGGTGCGACAGAAGATGAGCCGCATCGACTTCGTGGGTAA
TGCCATTCTGATTGCCTCGGTCACCTCCGTCCTCATTGCCCTCTCCTGGG
GCGGATCCCGGTATAGCTGGCGCTCCTGGCATGTGCTGGTTCCCCTCTTG
GTCGGATTTGCGGGCACGGGCTTCTTTCACTTCTACGAAAGTACCCGCTT
CTGCAAGGAGCCCACGTTGCCGACACGTATCCTCGCCAATAACCGGACCA
CCTCCATTGTTCTCTTCTGTTCATTCTGCCAGTTTCTGCTGTCCTTCTGG
ACCATCTACTTCCTGCCCATCTACTTCCAGGGCGTCCTCCTCGTCTCCCC
GAGCGCAGTGGCGTCTTACTCCTCCCGTTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0090CAN33_0090Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0090-T1.exon1CAN33_0090-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0090-T1.exon2CAN33_0090-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0090-T1.cdsCAN33_0090-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0090-T1CAN33_0090-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000041.1
NoteantiSMASH:Cluster_10000041.2
NoteEggNog:ENOG41
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:28953..30052 +
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