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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:123651..125696+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_0285-T1 ID=CAN33_0285-T1|Name=CAN33_0285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2046bp|location=Sequence derived from alignment at NKJJ01000004.1:123651..125696+ (Aspergillus niger FDAARGOS_311)
ATGCGCTGCTCCCTCATCTCCCTTCTAGGCCTGGCGGCCGTCCCGGCCCT
TGCAGGCTGTCCCTTCGCGCACACTGCGAATATGGACATTGATGACATTG
TGAAAGCACACGCTCACATGTCTCGAGGGCTGGTTGCCTCCAAGAGCAGC
CCCTCAACTGTTCCTACCCCCTCTAGCACCCCTTCTGTCGGGCAGAAAGG
CGTGTTCATGATGAACCGCATTGCTCCTGGCACCTCCGAACTCTACATTG
CCAACACAGATGGCAGTAATGAACGCCCACTCCTCTCCAATCCCGTCTAC
GAGTACCACGCCTCCTTCTCCCCGGATGGAGAATGGATCACATTCACCAG
CGAGCGCAATGGTGACGGTAACTCTGACATCTACCGCGTACGGACCAACG
GCTCCGATCTCCAGGAATTGGTTGCCACGCCTGCAGTGGAAGACTCCGTC
GTTATCTCTCCCAACGGCCGCCTGGCAGCCTACGTCTCCACCGCCAACAA
CATGAAGGCAAACATCTGGATCCTTGATCTGCAGACCGGCGCGCAGTGGA
ACCTCACTAACACGCCCACCACTGCCGCCAATTCCTCCCTCATGGAGAGC
TATCTCCGTCCTGCCTGGTCTCCCGATGGCGAATGGATAGCCTTCTCTTC
GGACCGCAACACCCAATGGGACGGACACGGCGTACCGACCTTCCTCGGCC
GCACGGGCTGGGAAACGACACAGGAACTCTCACTCTACGCCATCCGCCCC
AATGGCTCTGACTTCCGTCAGATCATCTCCAAGCCATACTACTCCCTGGG
ATCTCCGAAGTGGTCAGCAGACGGTAAACGCATCGTCTACTATGAAATGA
CCCGGGAAGACACCTACAATGCCCATCGTCCAGAAGCCATAACCACAGCC
AACTCCACCATCATGTCCGTAGACTTCGAGACAGGCACCGATGTGCGCGT
GGAAGTCGCCGGCTCCGGTGTCAAGCAATTCCCCCAGTACCTGGACAAGA
ACGGCACCATCGCCTACACCCTCAAAGGCGGCACCAGCGAGGGCTTCTAC
ACCACCGCAGGACTCTACGTCAACACGACCTCGGCGACCCTCCGGTCCCC
GGCGTGGTCCCCCGACGGCAAGCAAGTAGTCTACGAAAAGACCACCTGGA
GCATCCGCGCGGGGTACAAGCAGCTCTACAGCTGGGACAGTGACTGGGAC
TACCGCTTCACGGACGTCTTCCCTCAGGTCTCGCACCAGGAGCGCATCGC
CATCACACAGAAGCAGCTGGGCAATTCGTCCATCGTGACGTTGAACACAA
CCGGAGGCGACTTGCAACTCGTCTACGACCCGAGCACGGCGGACTTTGTC
AGCGATGACGAAACCACAGGATTGAGCGCTTACCAGCCCAGCTGGTCACC
CTGCGGCGAGTGGCTCGTCTTCGGCGTCGGATTCTGGTTCGAGACGAGAG
AAGCCTCGGGCGGATGGATCGTGCGGGCCACCGCCAACGGCAGCTACGCC
GAGGTACTCGTGAACAGCAGCTACTCCATCACCGAGGATGGAGCCCTGAA
TAACGGGTTCCCGAGTTTCTCGCCGGACGGCAAGAAAGTGGTGTATCGGG
TTTGGGGAGCCGACACTGCAAGCTACGGCAACGCCAGCGAGATCGGGCTG
CGGGTGCTGGACCTCGAGACGCGAAAGACAACCGTCCTGACCACAGAATG
GGATAATCTGCCCCAGTTCTCTCCCGATGGGGAGCTCATCCTATTCACAC
GCAAAACCAGCACGTACAACTATGATGTGTGTACTATCCGGCCGGATGGG
ACAGACCTACGCGTGTTGACGAGCAGCGGTGCTAATGATGCGCATGCGGT
GTGGTCGCAGGATGGGCGGATCATGTGGTCTACTGGCATGTATGGGTTCC
GGTTTGAGTGTGCGCTGTATGATGATACGTTCCAGCCGTATGGGCAGATT
ATGATTATGGATGCGGATGGGGGGAATAAGAAGTTGATGACCAACTCGAT
GTGGGAGGATTCGATGCCATTGTTCTTGCCGCTGGAGGTACTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:123651..125696+ >CAN33_0285-T1 ID=CAN33_0285-T1|Name=CAN33_0285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2046bp|location=Sequence derived from alignment at NKJJ01000004.1:123651..125696+ (Aspergillus niger FDAARGOS_311)
ATGCGCTGCTCCCTCATCTCCCTTCTAGGCCTGGCGGCCGTCCCGGCCCT
TGCAGGCTGTCCCTTCGCGCACACTGCGAATATGGACATTGATGACATTG
TGAAAGCACACGCTCACATGTCTCGAGGGCTGGTTGCCTCCAAGAGCAGC
CCCTCAACTGTTCCTACCCCCTCTAGCACCCCTTCTGTCGGGCAGAAAGG
CGTGTTCATGATGAACCGCATTGCTCCTGGCACCTCCGAACTCTACATTG
CCAACACAGATGGCAGTAATGAACGCCCACTCCTCTCCAATCCCGTCTAC
GAGTACCACGCCTCCTTCTCCCCGGATGGAGAATGGATCACATTCACCAG
CGAGCGCAATGGTGACGGTAACTCTGACATCTACCGCGTACGGACCAACG
GCTCCGATCTCCAGGAATTGGTTGCCACGCCTGCAGTGGAAGACTCCGTC
GTTATCTCTCCCAACGGCCGCCTGGCAGCCTACGTCTCCACCGCCAACAA
CATGAAGGCAAACATCTGGATCCTTGATCTGCAGACCGGCGCGCAGTGGA
ACCTCACTAACACGCCCACCACTGCCGCCAATTCCTCCCTCATGGAGAGC
TATCTCCGTCCTGCCTGGTCTCCCGATGGCGAATGGATAGCCTTCTCTTC
GGACCGCAACACCCAATGGGACGGACACGGCGTACCGACCTTCCTCGGCC
GCACGGGCTGGGAAACGACACAGGAACTCTCACTCTACGCCATCCGCCCC
AATGGCTCTGACTTCCGTCAGATCATCTCCAAGCCATACTACTCCCTGGG
ATCTCCGAAGTGGTCAGCAGACGGTAAACGCATCGTCTACTATGAAATGA
CCCGGGAAGACACCTACAATGCCCATCGTCCAGAAGCCATAACCACAGCC
AACTCCACCATCATGTCCGTAGACTTCGAGACAGGCACCGATGTGCGCGT
GGAAGTCGCCGGCTCCGGTGTCAAGCAATTCCCCCAGTACCTGGACAAGA
ACGGCACCATCGCCTACACCCTCAAAGGCGGCACCAGCGAGGGCTTCTAC
ACCACCGCAGGACTCTACGTCAACACGACCTCGGCGACCCTCCGGTCCCC
GGCGTGGTCCCCCGACGGCAAGCAAGTAGTCTACGAAAAGACCACCTGGA
GCATCCGCGCGGGGTACAAGCAGCTCTACAGCTGGGACAGTGACTGGGAC
TACCGCTTCACGGACGTCTTCCCTCAGGTCTCGCACCAGGAGCGCATCGC
CATCACACAGAAGCAGCTGGGCAATTCGTCCATCGTGACGTTGAACACAA
CCGGAGGCGACTTGCAACTCGTCTACGACCCGAGCACGGCGGACTTTGTC
AGCGATGACGAAACCACAGGATTGAGCGCTTACCAGCCCAGCTGGTCACC
CTGCGGCGAGTGGCTCGTCTTCGGCGTCGGATTCTGGTTCGAGACGAGAG
AAGCCTCGGGCGGATGGATCGTGCGGGCCACCGCCAACGGCAGCTACGCC
GAGGTACTCGTGAACAGCAGCTACTCCATCACCGAGGATGGAGCCCTGAA
TAACGGGTTCCCGAGTTTCTCGCCGGACGGCAAGAAAGTGGTGTATCGGG
TTTGGGGAGCCGACACTGCAAGCTACGGCAACGCCAGCGAGATCGGGCTG
CGGGTGCTGGACCTCGAGACGCGAAAGACAACCGTCCTGACCACAGAATG
GGATAATCTGCCCCAGTTCTCTCCCGATGGGGAGCTCATCCTATTCACAC
GCAAAACCAGCACGTACAACTATGATGTGTGTACTATCCGGCCGGATGGG
ACAGACCTACGCGTGTTGACGAGCAGCGGTGCTAATGATGCGCATGCGGT
GTGGTCGCAGGATGGGCGGATCATGTGGTCTACTGGCATGTATGGGTTCC
GGTTTGAGTGTGCGCTGTATGATGATACGTTCCAGCCGTATGGGCAGATT
ATGATTATGGATGCGGATGGGGGGAATAAGAAGTTGATGACCAACTCGAT
GTGGGAGGATTCGATGCCATTGTTCTTGCCGCTGGAGGTACTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:PL22_1 |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR011659 |
| DBxref | PFAM:PF07676 |
| Product | WD40-like Beta Propeller Repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:123651..125696 + |
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