You are here

Home

CAN33_0545-T1, CAN33_0545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0545-T1
Unique NameCAN33_0545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:255430..255984+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0545-T1 ID=CAN33_0545-T1|Name=CAN33_0545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=555bp|location=Sequence derived from alignment at NKJJ01000004.1:255430..255984+ (Aspergillus niger FDAARGOS_311)
ATGGTTCTTGTCACTAAGCTTATTGCTCTTCTGCCCTTCGTCGTGGCCAC
CTTGGCTGCGCCAACAGGACACCATGCAGGTAAGAAAAAGTCTTACAACA
TTTGCCCATATTTCGATGATAGGGTTCTTATAGTATGAGATACGAAAGTG
CGCGCTACCGGTGATATGGACGAGGATCTGATGGAGGTCTACAAGCGTGC
TATCGGTGATATGGATGAGGACTTGATGGAGGTCTACAAGCGTGCCATCA
GCGGTATGGATGAGGACCTGATGGAGGTTTATAAGCGTGCCACCGATGGT
ATGGATGAGGACCTGATGGAGGTTTACAAGCGAGGCGCTGGCGATATGGA
TGAGGACCTGATGGAGGTCTACAAGCGTGCTATTGGCGGTATGGATGAGG
ATTTGATGGAGGTCTACAAGCGTGCTATCGGTGATATGGATGAGGACTTG
ATGGAGGTCTACAAGCGTGGTATCAATGATATGGACGAGGACCTGATGGA
GGTCTACAAGCGAGGCGCCGGCGAGATGGATGAGGACCTGATGGAGGTTT
ACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:255430..255984+

>CAN33_0545-T1 ID=CAN33_0545-T1|Name=CAN33_0545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=972bp|location=Sequence derived from alignment at NKJJ01000004.1:255430..255984+ (Aspergillus niger FDAARGOS_311)
ATGGTTCTTGTCACTAAGCTTATTGCTCTTCTGCCCTTCGTCGTGGCCAC
CTTGGCTGCGCCAACAGGACACCATGCAGTGCGCGCTACCGGTGATATGG
ACGAGGATCTGATGGAGGTCTACAAGCGTGCTATCGGTGATATGGATGAG
GACTTGATGGAGGTCTACAAGCGTGCCATCAGCGGTATGGATGAGGACCT
GATGGAGGTTTATAAGCGTGCCACCGATGGTATGGATGAGGACCTGATGG
AGGTTTACAAGCGAGGCGCTGGCGATATGGATGAGGACCTGATGGAGGTC
TACAAGCGTGCTATTGGCGGTATGGATGAGGATTTGATGGAGGTCTACAA
GCGTGCTATCGGTGATATGGATGAGGACTTGATGGAGGTCTACAAGCGTG
GTATCAATGATATGGACGAGGACCTGATGGAGGTCTACAAGCGAGGCGCC
GGCGAGATGGATGAGGACCTGATGGAGGTTTACTGAATGGTTCTTGTCAC
TAAGCTTATTGCTCTTCTGCCCTTCGTCGTGGCCACCTTGGCTGCGCCAA
CAGGACACCATGCAGTGCGCGCTACCGGTGATATGGACGAGGATCTGATG
GAGGTCTACAAGCGTGCTATCGGTGATATGGATGAGGACTTGATGGAGGT
CTACAAGCGTGCCATCAGCGGTATGGATGAGGACCTGATGGAGGTTTATA
AGCGTGCCACCGATGGTATGGATGAGGACCTGATGGAGGTTTACAAGCGA
GGCGCTGGCGATATGGATGAGGACCTGATGGAGGTCTACAAGCGTGCTAT
TGGCGGTATGGATGAGGATTTGATGGAGGTCTACAAGCGTGCTATCGGTG
ATATGGATGAGGACTTGATGGAGGTCTACAAGCGTGGTATCAATGATATG
GACGAGGACCTGATGGAGGTCTACAAGCGAGGCGCCGGCGAGATGGATGA
GGACCTGATGGAGGTTTACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0545CAN33_0545Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0545-T1.exon1CAN33_0545-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0545-T1.exon2CAN33_0545-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0545-T1.cdsCAN33_0545-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0545-T1CAN33_0545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:255430..255984 +
Powered by Drupal