You are here

Home

CAN33_0580-T1, CAN33_0580-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0580-T1
Unique NameCAN33_0580-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:278374..280187+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0580-T1 ID=CAN33_0580-T1|Name=CAN33_0580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1814bp|location=Sequence derived from alignment at NKJJ01000004.1:278374..280187+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACTGCACAGGC
CGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAGAAAGCTGA
AGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCCCATTGCTC
TACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTTGGGTACAA
CTCTGGTATACCTTTCTTCTTTTCAGCTTTCTGATAAACAAGTCAATATG
AGTCGTTGCTAATAGCTATGCTACATAGGAATCATGTCAGGTCTCCTCGT
CAATCCTGCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACG
GCTCAACAACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTGT
CTACAAGCGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGA
TATGATGGGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTT
TCAGTGCGTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCT
GGTCGCACCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACC
TATCATTCAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGG
GAATTGAATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGTA
GATTATGGATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCC
ATTCATCATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCT
TTCTCCCCGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAA
AGCTTGCAGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGGA
ACATGTGCAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAA
CCAACTTAGGAAAGTCATCGTGGATGGTGAGTTCTATTACGCCTGTCATG
GGATGTCATGCAAGTGCGAAACTGACCATAGACAGGAAATGTTCACCCGA
TACCGTAAGCGGACCATCGTCGGAGTAACTGTCCAAATGTTTGCACAACT
TAACGGAATCAACATCATCTCCTTTTACCTTCCCAGCACACTTGCTACCG
CCGGCTTCGATGAGCGAAAATCCCTTCTGTACACCGCAGCCAATGCACTA
CCTTACACTGCGGCCACAATTTCGACTTGGTGGTTAGCAGACCGATGGGG
ACGGAAACCATTACTAATCCTTGGAGGTGAGTCCATTTTCTCCCCTCCCG
ATACCTTCATGTACACTGTAAGCACCCGGCTAAGACATGCATCAAAACAG
GTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAGCA
GACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATGCT
ATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCTAC
CAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGGCT
ACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCGGA
TGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTTCT
GTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCAAT
AGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCAGA
TGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAGGA
AGGATGTTGTGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:278374..280187+

>CAN33_0580-T1 ID=CAN33_0580-T1|Name=CAN33_0580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6432bp|location=Sequence derived from alignment at NKJJ01000004.1:278374..280187+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACTGCACAGGC
CGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAGAAAGCTGA
AGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCCCATTGCTC
TACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTTGGGTACAA
CTCTGGAATCATGTCAGGTCTCCTCGTCAATCCTGCTTTTGTAGCTCGCT
TCTTCAAAGACTACGGCGGTGCTGACGGCTCAACAACCGGAGTCGATCCT
TCGATCACCGGGATAGCTGTTGCTTGTCTACAAGCGTCCGCAGCGGTGGG
TGCACTCCTTGCAGGACGCTTGGGCGATATGATGGGGCGCAAGCGATGTG
TTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGCGTTCATTCAGATCTTC
GCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCACCATTCAAGGTCTAGG
TGTTGGGTTTCTTTCCATGACAGTACCTATCATTCAGACTGAGATTGCCG
CCCCGCATCGTCGTGGTTTAATGGTGGGAATTGAATACACGTTTCAGATT
GCAGGATACATGCTTTCATGTTGGGTAGATTATGGATTTAATTTTCTTTT
GCCCAGTGAAATGTCCTGGCAAGGTCCATTCATCATCCAAATTGCTCTCT
CCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCCCGAGACACCTCGTTGG
CTGGCCAAAAACGGATTCATGCAAGAAAGCTTGCAGACGGTCGCTGACCT
TCACGCCAATGGCGATACTCAAGCGGAACATGTGCAGCAGGTGTTTGTGG
AAATCGAAGAAGCAGTTATCTTCGAAACCAACTTAGGAAAGTCATCGTGG
ATGGAAATGTTCACCCGATACCGTAAGCGGACCATCGTCGGAGTAACTGT
CCAAATGTTTGCACAACTTAACGGAATCAACATCATCTCCTTTTACCTTC
CCAGCACACTTGCTACCGCCGGCTTCGATGAGCGAAAATCCCTTCTGTAC
ACCGCAGCCAATGCACTACCTTACACTGCGGCCACAATTTCGACTTGGTG
GTTAGCAGACCGATGGGGACGGAAACCATTACTAATCCTTGGAGGTATCG
GAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAGCAGACCTA
GACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATGCTATACAA
CATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCTACCAGCTG
AAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGGCTACTACC
AGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCGGATGCGTT
CGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTTCTGTCTCT
TCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCAATAGCACG
CTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCAGATGCTGA
TGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAGGAAGGATG
TTGTGTGAATGTCCTCTCTACCGGCGGATAATGCCGCTTTGACTCGCACT
GCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGGCTGGAGAG
AAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAAGGGAACCC
CATTGCTCTACGCGACATGTGGTTTCGGCAGTCTGGGTGATGCCCTGTTT
GGGTACAACTCTGGAATCATGTCAGGTCTCCTCGTCAATCCTGCTTTTGT
AGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACGGCTCAACAACCGGAG
TCGATCCTTCGATCACCGGGATAGCTGTTGCTTGTCTACAAGCGTCCGCA
GCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGATATGATGGGGCGCAA
GCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGCGTTCATTC
AGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCACCATTCAA
GGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACCTATCATTCAGACTGA
GATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGGGAATTGAATACACGT
TTCAGATTGCAGGATACATGCTTTCATGTTGGGTAGATTATGGATTTAAT
TTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCCATTCATCATCCAAAT
TGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCCCGAGACAC
CTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAAAGCTTGCAGACGGTC
GCTGACCTTCACGCCAATGGCGATACTCAAGCGGAACATGTGCAGCAGGT
GTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAACCAACTTAGGAAAGT
CATCGTGGATGGAAATGTTCACCCGATACCGTAAGCGGACCATCGTCGGA
GTAACTGTCCAAATGTTTGCACAACTTAACGGAATCAACATCATCTCCTT
TTACCTTCCCAGCACACTTGCTACCGCCGGCTTCGATGAGCGAAAATCCC
TTCTGTACACCGCAGCCAATGCACTACCTTACACTGCGGCCACAATTTCG
ACTTGGTGGTTAGCAGACCGATGGGGACGGAAACCATTACTAATCCTTGG
AGGTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTTCACCGAAG
CAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCTTCGTTATG
CTATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCATGGCTGCT
ACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAATGGCTCTGG
CTACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGGTATCTCCG
GATGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATTGCTGGGTT
CTGTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGAGACGGCCA
ATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAGCGTTTGCA
GATGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATAGATTATAG
GAAGGATGTTGTGTGAATGTCCTCTCTACCGGCGGATAATGCCGCTTTGA
CTCGCACTGCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGCAGAGCTGG
CTGGAGAGAAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTATCCCTTCAA
GGGAACCCCATTGCTCTACGCGACATGTGGTTTCGGCAGTCTGGGTGATG
CCCTGTTTGGGTACAACTCTGGAATCATGTCAGGTCTCCTCGTCAATCCT
GCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGACGGCTCAAC
AACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTGTCTACAAG
CGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCGATATGATG
GGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTTTTCAGTGC
GTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGCTGGTCGCA
CCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTACCTATCATT
CAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTGGGAATTGA
ATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGTAGATTATG
GATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTCCATTCATC
ATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTCTTTCTCCC
CGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGAAAGCTTGC
AGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGGAACATGTG
CAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAAACCAACTT
AGGAAAGTCATCGTGGATGGAAATGTTCACCCGATACCGTAAGCGGACCA
TCGTCGGAGTAACTGTCCAAATGTTTGCACAACTTAACGGAATCAACATC
ATCTCCTTTTACCTTCCCAGCACACTTGCTACCGCCGGCTTCGATGAGCG
AAAATCCCTTCTGTACACCGCAGCCAATGCACTACCTTACACTGCGGCCA
CAATTTCGACTTGGTGGTTAGCAGACCGATGGGGACGGAAACCATTACTA
ATCCTTGGAGGTATCGGAATGGCAGTCCTGCTTGGCATCGTCTGCGCCTT
CACCGAAGCAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCAATACGCCT
TCGTTATGCTATACAACATCCTATACGGCTTCACCTGGGGTCCAATGCCA
TGGCTGCTACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGTAAAGGAAT
GGCTCTGGCTACTACCAGCAACTGGATCTTCAACTTCATCATCGGCATGG
TATCTCCGGATGCGTTCGCAGGTATCAACGGATACTTCTACGTTGTTATT
GCTGGGTTCTGTCTCTTCTCTGCAGGCCTGGTACACTTCTACTATGTTGA
GACGGCCAATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGGCGATACAG
CGTTTGCAGATGCTGATGGGGAGGCGAGGGAGGCTTCTGACGTGCGGATA
GATTATAGGAAGGATGTTGTGTGAATGTCCTCTCTACCGGCGGATAATGC
CGCTTTGACTCGCACTGCACAGGCCGTGGCTGCTCGGGAAGTAGAGCAGC
AGAGCTGGCTGGAGAGAAAGCTGAAGCCGACGAAGGTGAGAGCTTGGTAT
CCCTTCAAGGGAACCCCATTGCTCTACGCGACATGTGGTTTCGGCAGTCT
GGGTGATGCCCTGTTTGGGTACAACTCTGGAATCATGTCAGGTCTCCTCG
TCAATCCTGCTTTTGTAGCTCGCTTCTTCAAAGACTACGGCGGTGCTGAC
GGCTCAACAACCGGAGTCGATCCTTCGATCACCGGGATAGCTGTTGCTTG
TCTACAAGCGTCCGCAGCGGTGGGTGCACTCCTTGCAGGACGCTTGGGCG
ATATGATGGGGCGCAAGCGATGTGTTCGTCTTGGCGGGTTCATCTACTTT
TTCAGTGCGTTCATTCAGATCTTCGCGCCTGGGTTTGGCACCTTCATTGC
TGGTCGCACCATTCAAGGTCTAGGTGTTGGGTTTCTTTCCATGACAGTAC
CTATCATTCAGACTGAGATTGCCGCCCCGCATCGTCGTGGTTTAATGGTG
GGAATTGAATACACGTTTCAGATTGCAGGATACATGCTTTCATGTTGGGT
AGATTATGGATTTAATTTTCTTTTGCCCAGTGAAATGTCCTGGCAAGGTC
CATTCATCATCCAAATTGCTCTCTCCTTCATTCTTCTGGCCATGTCGTTC
TTTCTCCCCGAGACACCTCGTTGGCTGGCCAAAAACGGATTCATGCAAGA
AAGCTTGCAGACGGTCGCTGACCTTCACGCCAATGGCGATACTCAAGCGG
AACATGTGCAGCAGGTGTTTGTGGAAATCGAAGAAGCAGTTATCTTCGAA
ACCAACTTAGGAAAGTCATCGTGGATGGAAATGTTCACCCGATACCGTAA
GCGGACCATCGTCGGAGTAACTGTCCAAATGTTTGCACAACTTAACGGAA
TCAACATCATCTCCTTTTACCTTCCCAGCACACTTGCTACCGCCGGCTTC
GATGAGCGAAAATCCCTTCTGTACACCGCAGCCAATGCACTACCTTACAC
TGCGGCCACAATTTCGACTTGGTGGTTAGCAGACCGATGGGGACGGAAAC
CATTACTAATCCTTGGAGGTATCGGAATGGCAGTCCTGCTTGGCATCGTC
TGCGCCTTCACCGAAGCAGACCTAGACGTCCAGGTCCGCGCCAAGGGCCA
ATACGCCTTCGTTATGCTATACAACATCCTATACGGCTTCACCTGGGGTC
CAATGCCATGGCTGCTACCAGCTGAAATCTTCCCCTTGCGTGGCCGCAGT
AAAGGAATGGCTCTGGCTACTACCAGCAACTGGATCTTCAACTTCATCAT
CGGCATGGTATCTCCGGATGCGTTCGCAGGTATCAACGGATACTTCTACG
TTGTTATTGCTGGGTTCTGTCTCTTCTCTGCAGGCCTGGTACACTTCTAC
TATGTTGAGACGGCCAATAGCACGCTGGAGGAAGTTGCAGAGTTGTTTGG
CGATACAGCGTTTGCAGATGCTGATGGGGAGGCGAGGGAGGCTTCTGACG
TGCGGATAGATTATAGGAAGGATGTTGTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0580CAN33_0580Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0580-T1.exon1CAN33_0580-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0580-T1.exon2CAN33_0580-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0580-T1.exon3CAN33_0580-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0580-T1.exon4CAN33_0580-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0580-T1.cdsCAN33_0580-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0580-T1CAN33_0580-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
ProductSugar (and other) transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:278374..280187 +
Powered by Drupal