You are here

Home

CAN33_0585-T1, CAN33_0585-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0585-T1
Unique NameCAN33_0585-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:280835..281242-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0585-T1 ID=CAN33_0585-T1|Name=CAN33_0585-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=408bp|location=Sequence derived from alignment at NKJJ01000004.1:280835..281242- (Aspergillus niger FDAARGOS_311)
ATGCAGCTCACCAGCATTGCCATCATCCTCTTCGCCGCAATGGGCGCCAT
TGCCACCCCTATCACGGCCGAGGCGGACAATCTCGCTGCTCGGGAGGCGG
AGCTTAGTAAATACGGAGGGGTAGGTTCTCCTTCTTCCATGTTCTCTATC
GCTGTAGAGACGGAACTAACATATATGAACTATAATAGGAATGCAGCGTT
GAGCACAACACCTGCACATACCTAAAGGGCGGAAAGGATCACATTGTCAG
TTGTCCTTCGGCTGCTAATTTGAGGGTATATTAAGACTTCTGCTTCTATT
CTGGTATGATTGATCATGCTAATTTGTTATCTACAGTGCAAGACTGAACG
TCACCACTGCGAATACGACGAGCACCATAAGACGGTCGATTGCCAGACTC
CTGTTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:280835..281242-

>CAN33_0585-T1 ID=CAN33_0585-T1|Name=CAN33_0585-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=837bp|location=Sequence derived from alignment at NKJJ01000004.1:280835..281242- (Aspergillus niger FDAARGOS_311)
TGCAAGACTGAACGTCACCACTGCGAATACGACGAGCACCATAAGACGGT
CGATTGCCAGACTCCTGTTTGAGAATGCAGCGTTGAGCACAACACCTGCA
CATACCTAAAGGGCGGAAAGGATCACATTGTCAGTTGTCCTTCGGCTGCT
AATTTGAGGATGCAGCTCACCAGCATTGCCATCATCCTCTTCGCCGCAAT
GGGCGCCATTGCCACCCCTATCACGGCCGAGGCGGACAATCTCGCTGCTC
GGGAGGCGGAGCTTAGTAAATACGGAGGGTGCAAGACTGAACGTCACCAC
TGCGAATACGACGAGCACCATAAGACGGTCGATTGCCAGACTCCTGTTTG
AGAATGCAGCGTTGAGCACAACACCTGCACATACCTAAAGGGCGGAAAGG
ATCACATTGTCAGTTGTCCTTCGGCTGCTAATTTGAGGATGCAGCTCACC
AGCATTGCCATCATCCTCTTCGCCGCAATGGGCGCCATTGCCACCCCTAT
CACGGCCGAGGCGGACAATCTCGCTGCTCGGGAGGCGGAGCTTAGTAAAT
ACGGAGGGTGCAAGACTGAACGTCACCACTGCGAATACGACGAGCACCAT
AAGACGGTCGATTGCCAGACTCCTGTTTGAGAATGCAGCGTTGAGCACAA
CACCTGCACATACCTAAAGGGCGGAAAGGATCACATTGTCAGTTGTCCTT
CGGCTGCTAATTTGAGGATGCAGCTCACCAGCATTGCCATCATCCTCTTC
GCCGCAATGGGCGCCATTGCCACCCCTATCACGGCCGAGGCGGACAATCT
CGCTGCTCGGGAGGCGGAGCTTAGTAAATACGGAGGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0585CAN33_0585Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0585-T1CAN33_0585-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0585-T1.cdsCAN33_0585-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0585-T1.exon3CAN33_0585-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0585-T1.exon2CAN33_0585-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0585-T1.exon1CAN33_0585-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR023112
DBxrefInterPro:IPR022706
DBxrefPFAM:PF11402
ProductAntifungal protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:280835..281242 -
Powered by Drupal