You are here

Home

CAN33_0670-T1, CAN33_0670-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0670-T1
Unique NameCAN33_0670-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:323804..324728-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0670-T1 ID=CAN33_0670-T1|Name=CAN33_0670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=925bp|location=Sequence derived from alignment at NKJJ01000004.1:323804..324728- (Aspergillus niger FDAARGOS_311)
ATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTGGTACCAG
CAGCAGCAGCAGCAGCGCATCTGATCTAGAAGGAACATGGACAACCAAGT
CCCGCCAGGTTGTGACAGGTCCGGTATGTTTTGCGCCGTGTTGATTGTTT
ACCAGCCTCGATGGGCCAGCGCTACCTGTTCGCTAACCGTTCAACCTCTG
ATACTCACAGGGCTTTTACGATCCTATTGGTGATAAATTCCTCGAACCCA
ATCTCACTGGTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAA
GCCTACTATCGTGCCATTGCCAATCGTTAGTCCCAGAATTCTTGTAACCA
TGATAGCGCTTGCATTTCCCCGGTTCTGACATGTCATGATCATTAAATAG
CCCAGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACC
TATACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGA
TGGACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATA
CCAGATACAACCAGACTGAGCACTTTGAGGTACTTGGCCTCTGCCCCTTT
ACTATATGAGAGCTACTGACAGGTATAGTCGTTTGCTGTCTCGGTAGATT
CATACCATGGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCG
ATGCATCCAATGTATCTTATATACAAACCGCCACAGATGTTACCCACACA
GACGCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAG
ATACTGGAGGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTT
GGTGACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTACACTAGG
AGGGATCACCTTCTTTCGCTCTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:323804..324728-

>CAN33_0670-T1 ID=CAN33_0670-T1|Name=CAN33_0670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3375bp|location=Sequence derived from alignment at NKJJ01000004.1:323804..324728- (Aspergillus niger FDAARGOS_311)
TCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCTTGACGT
CAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAAC
CGCCACAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAG
AGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCATAAAGGA
TTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTG
GTATATTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAGCCC
AGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTAT
ACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGG
ACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATACCA
GATACAACCAGACTGAGCACTTTGAGGGCTTTTACGATCCTATTGGTGAT
AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGA
TGGACATTATGAAGAAGCCTACTATCGTGCCATTGCCAATCGAACATGGA
CAACCAAGTCCCGCCAGGTTGTGACAGGTCCGATGGCAATGTACTTCTTC
CTTGGCCTTCTGTTAACGGCCGTTGTCGTTTGCTGTCTCGGTAGATTCAT
ACCATGGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCGATG
CATCCAATGTATCTTATATACAAACCGCCACAGATGTTACCCACACAGAC
GCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATA
CTGGAGGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTTGGT
GACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTACACTAGGAGG
GATCACCTTCTTTCGCTCTTAGCCCAGGATCCTTCCTGCCCAAAAGGGAT
TATGCAATGGCAGCACGGTACCTATACCGTAAACAGTGATGGATCGGTGG
ACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCAGATCCTTGT
CAGTCCTCTACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGA
GGGCTTTTACGATCCTATTGGTGATAAATTCCTCGAACCCAATCTCACTG
GTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAAGCCTACTAT
CGTGCCATTGCCAATCGAACATGGACAACCAAGTCCCGCCAGGTTGTGAC
AGGTCCGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTG
TCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCTTGACGT
CAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAAC
CGCCACAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAG
AGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCATAAAGGA
TTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTG
GTATATTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAGCCC
AGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTAT
ACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGG
ACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATACCA
GATACAACCAGACTGAGCACTTTGAGGGCTTTTACGATCCTATTGGTGAT
AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGA
TGGACATTATGAAGAAGCCTACTATCGTGCCATTGCCAATCGAACATGGA
CAACCAAGTCCCGCCAGGTTGTGACAGGTCCGATGGCAATGTACTTCTTC
CTTGGCCTTCTGTTAACGGCCGTTGTCGTTTGCTGTCTCGGTAGATTCAT
ACCATGGTGTCCAACGCCTTGACGTCAAGAATTTCGACGGATCGCCGATG
CATCCAATGTATCTTATATACAAACCGCCACAGATGTTACCCACACAGAC
GCTCAATCCAAGCTCCTCCAGCAAGAGTAAACGCCAGGTCGAGGGAGATA
CTGGAGGTCGCTTTAGCATAAAGGATTTGGTCAGCAGGGAGAAAGTTGGT
GACCCGAATAACTGGCTGTGGCTTGGTATATTCATGACTACACTAGGAGG
GATCACCTTCTTTCGCTCTTAGCCCAGGATCCTTCCTGCCCAAAAGGGAT
TATGCAATGGCAGCACGGTACCTATACCGTAAACAGTGATGGATCGGTGG
ACCTGACCCCGATCGCTGTCGATGGACGCCAGCTTTTATCAGATCCTTGT
CAGTCCTCTACGGGTACCTATACCAGATACAACCAGACTGAGCACTTTGA
GGGCTTTTACGATCCTATTGGTGATAAATTCCTCGAACCCAATCTCACTG
GTATCTCGTACTCGTTCAGCGCCGATGGACATTATGAAGAAGCCTACTAT
CGTGCCATTGCCAATCGAACATGGACAACCAAGTCCCGCCAGGTTGTGAC
AGGTCCGATGGCAATGTACTTCTTCCTTGGCCTTCTGTTAACGGCCGTTG
TCGTTTGCTGTCTCGGTAGATTCATACCATGGTGTCCAACGCCTTGACGT
CAAGAATTTCGACGGATCGCCGATGCATCCAATGTATCTTATATACAAAC
CGCCACAGATGTTACCCACACAGACGCTCAATCCAAGCTCCTCCAGCAAG
AGTAAACGCCAGGTCGAGGGAGATACTGGAGGTCGCTTTAGCATAAAGGA
TTTGGTCAGCAGGGAGAAAGTTGGTGACCCGAATAACTGGCTGTGGCTTG
GTATATTCATGACTACACTAGGAGGGATCACCTTCTTTCGCTCTTAGCCC
AGGATCCTTCCTGCCCAAAAGGGATTATGCAATGGCAGCACGGTACCTAT
ACCGTAAACAGTGATGGATCGGTGGACCTGACCCCGATCGCTGTCGATGG
ACGCCAGCTTTTATCAGATCCTTGTCAGTCCTCTACGGGTACCTATACCA
GATACAACCAGACTGAGCACTTTGAGGGCTTTTACGATCCTATTGGTGAT
AAATTCCTCGAACCCAATCTCACTGGTATCTCGTACTCGTTCAGCGCCGA
TGGACATTATGAAGAAGCCTACTATCGTGCCATTGCCAATCGAACATGGA
CAACCAAGTCCCGCCAGGTTGTGACAGGTCCGATGGCAATGTACTTCTTC
CTTGGCCTTCTGTTAACGGCCGTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0006458'de novo' protein folding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ROT1CAN33_0670Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0670-T1CAN33_0670-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0670-T1.cdsCAN33_0670-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0670-T1.exon5CAN33_0670-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_0670-T1.exon4CAN33_0670-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_0670-T1.exon3CAN33_0670-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0670-T1.exon2CAN33_0670-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0670-T1.exon1CAN33_0670-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-21)
DBxrefInterPro:IPR019623
DBxrefPFAM:PF10681
ProductReversal of tor2 lethality
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:323804..324728 -
Powered by Drupal