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CAN33_0680-T1, CAN33_0680-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0680-T1
Unique NameCAN33_0680-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:326115..326530-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0680-T1 ID=CAN33_0680-T1|Name=CAN33_0680-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=416bp|location=Sequence derived from alignment at NKJJ01000004.1:326115..326530- (Aspergillus niger FDAARGOS_311)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATACTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:326115..326530-

>CAN33_0680-T1 ID=CAN33_0680-T1|Name=CAN33_0680-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=720bp|location=Sequence derived from alignment at NKJJ01000004.1:326115..326530- (Aspergillus niger FDAARGOS_311)
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATACTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGAATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCA
AGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCAACGG
TCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGG
AAAAATCAGGGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAG
TGGAGGTTCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTA
GGTATGCGGCAGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATACT
GATTATATTCTTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACG
TGTCTCTTATTCAAGCCGTGCAGTGAATGACCGGTCGTGGAGGCGGTGGA
GCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCT
TCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCC
GCATAGAGGGAAAAATCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0680CAN33_0680Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0680-T1CAN33_0680-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0680-T1.cdsCAN33_0680-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0680-T1.exon2CAN33_0680-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0680-T1.exon1CAN33_0680-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265NHW
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR027078
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductLSM domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:326115..326530 -
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