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CAN33_0695-T1, CAN33_0695-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0695-T1
Unique NameCAN33_0695-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:339507..340124+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0695-T1 ID=CAN33_0695-T1|Name=CAN33_0695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=618bp|location=Sequence derived from alignment at NKJJ01000004.1:339507..340124+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTGTACGTTTTGACT
TGCTCTGAAATGGCTCATGTGTATCTAACACACTTGTGCGCAGTTGACTT
CGAGTCGTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTG
GCGAGCCCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTG
ACTGGGTTTATCGGTGTGGGACAGCTCCGATACAGTATGTGAAGCAGGAT
GGAGTTTACTGGATTGATACTGATCATGGCTACAGTCCTGACGAATCTCG
GTGAGAAGATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGAC
ACCAGTTCCGGCGAGATCAACTACACCGGTATGTTACACCATCTGATTGT
TCACCATGCCTTTGTGTTGGGTCAAGCTAACAGCAGCAGACCTCGTCCGC
ACCATCCTGGCCAACTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:339507..340124+

>CAN33_0695-T1 ID=CAN33_0695-T1|Name=CAN33_0695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000004.1:339507..340124+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGTT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC4CAN33_0695Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0695-T1.exon1CAN33_0695-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0695-T1.exon2CAN33_0695-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0695-T1.exon3CAN33_0695-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0695-T1.exon4CAN33_0695-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0695-T1.cdsCAN33_0695-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0695-T1CAN33_0695-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265591
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR002048
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
ProductSCF ubiquitin ligase complex subunit cdc4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:339507..340124 +
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