|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:355899..356886- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_0730-T1 ID=CAN33_0730-T1|Name=CAN33_0730-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=988bp|location=Sequence derived from alignment at NKJJ01000004.1:355899..356886- (Aspergillus niger FDAARGOS_311)
ATGATCTCTTCTAACAACAAGCCTTCTTTCACACGCTTTAATGCTACCGC
TACCTCTACTGATGTCCTCGTCGAGGCAATCCGTCGAGACGGGGGAGTGA
TCGTAGAGAGCCTCATCACCCGCGATGCAGCGGAGCAAATCAAACAAGAT
CTGAAGCCACACTTCGACAAAGATACACCAGACAAGTATGGTCTGTTCCC
TCCGACAACCCAGCGTGCTACTGGTCTGCTAGGCATCTCGGATGCCTGCA
TCGAATTGGCATGTAATCCAACATATATCAGCATCGCCAATGCACTTGTC
TCGTCAAGTTATTCCTTCTGGAGGGCGATCATAAGGTGACGGTGTCTGGG
AAGCCCATCATCTCTAGCACGGCTGGGTTCCGAGTGACACCGGGAAGCAA
ACAGCAGGTGCTTCACCGTGACGATAAGTAGGCCTGACGGGACCTTTGCC
AATTTTAGTAGGCTGATGAAAAGCAGTGACTATCACCCACACGATGCGCA
ACTGCCCGTGATGATTGGCTGTGTGACTGCATTGACAAAGACAACCAAGG
AAAATGGAGCGACCGTTGCCATTCCGGGTTCACATCTCTGGGGCCCGGAG
CGGCGACCATTAGATGAGGAGGCCATTCCTGCAGAATTGGAACCCGGTGA
TGCGTTTATCTTCTTGGGGAATCTGTATCATGCTGGTGGTGCAAATGTCA
CAGAGTATGTTGCTCCCTTCTTCATTTCAATGTTGCATTTTGGTGACCAT
CTTTGCGTTCAGAAACAATTATCGCGAAACGGTGGGAATTTTCCTCTGCA
AGCCAACACTACGTCCAGCCGAGAACCAGTTCTTGGTAGTTCCCTTAGAG
CGAGTGAAGAAGATGAAGCCCCAGGCCCAAAGACTTCTAGGGTACAAAGT
CTGCGAGCCAGGGGTTGGATTCATGTATTATCAGGATCCAATGAGGGCGT
TGTTCGGCGTAGAGGATGAAGAAACCGTTGATATGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:355899..356886- >CAN33_0730-T1 ID=CAN33_0730-T1|Name=CAN33_0730-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3300bp|location=Sequence derived from alignment at NKJJ01000004.1:355899..356886- (Aspergillus niger FDAARGOS_311)
AAACAATTATCGCGAAACGGTGGGAATTTTCCTCTGCAAGCCAACACTAC
GTCCAGCCGAGAACCAGTTCTTGGTAGTTCCCTTAGAGCGAGTGAAGAAG
ATGAAGCCCCAGGCCCAAAGACTTCTAGGGTACAAAGTCTGCGAGCCAGG
GGTTGGATTCATGTATTATCAGGATCCAATGAGGGCGTTGTTCGGCGTAG
AGGATGAAGAAACCGTTGATATGTGATGACTATCACCCACACGATGCGCA
ACTGCCCGTGATGATTGGCTGTGTGACTGCATTGACAAAGACAACCAAGG
AAAATGGAGCGACCGTTGCCATTCCGGGTTCACATCTCTGGGGCCCGGAG
CGGCGACCATTAGATGAGGAGGCCATTCCTGCAGAATTGGAACCCGGTGA
TGCGTTTATCTTCTTGGGGAATCTGTATCATGCTGGTGGTGCAAATGTCA
CAGACCCATCATCTCTAGCACGGCTGGGTTCCGAGTGACACCGGGAAGCA
AACAGCAGGTGCTTCACCGTGACGATAAATGATCTCTTCTAACAACAAGC
CTTCTTTCACACGCTTTAATGCTACCGCTACCTCTACTGATGTCCTCGTC
GAGGCAATCCGTCGAGACGGGGGAGTGATCGTAGAGAGCCTCATCACCCG
CGATGCAGCGGAGCAAATCAAACAAGATCTGAAGCCACACTTCGACAAAG
ATACACCAGACAAGTATGGTCTGTTCCCTCCGACAACCCAGCGTGCTACT
GGTCTGCTAGGCATCTCGGATGCCTGCATCGAATTGGCATGTAATCCAAC
ATATATCAGCATCGCCAATGCACTTAAACAATTATCGCGAAACGGTGGGA
ATTTTCCTCTGCAAGCCAACACTACGTCCAGCCGAGAACCAGTTCTTGGT
AGTTCCCTTAGAGCGAGTGAAGAAGATGAAGCCCCAGGCCCAAAGACTTC
TAGGGTACAAAGTCTGCGAGCCAGGGGTTGGATTCATGTATTATCAGGAT
CCAATGAGGGCGTTGTTCGGCGTAGAGGATGAAGAAACCGTTGATATGTG
ATGACTATCACCCACACGATGCGCAACTGCCCGTGATGATTGGCTGTGTG
ACTGCATTGACAAAGACAACCAAGGAAAATGGAGCGACCGTTGCCATTCC
GGGTTCACATCTCTGGGGCCCGGAGCGGCGACCATTAGATGAGGAGGCCA
TTCCTGCAGAATTGGAACCCGGTGATGCGTTTATCTTCTTGGGGAATCTG
TATCATGCTGGTGGTGCAAATGTCACAGACCCATCATCTCTAGCACGGCT
GGGTTCCGAGTGACACCGGGAAGCAAACAGCAGGTGCTTCACCGTGACGA
TAAATGATCTCTTCTAACAACAAGCCTTCTTTCACACGCTTTAATGCTAC
CGCTACCTCTACTGATGTCCTCGTCGAGGCAATCCGTCGAGACGGGGGAG
TGATCGTAGAGAGCCTCATCACCCGCGATGCAGCGGAGCAAATCAAACAA
GATCTGAAGCCACACTTCGACAAAGATACACCAGACAAGTATGGTCTGTT
CCCTCCGACAACCCAGCGTGCTACTGGTCTGCTAGGCATCTCGGATGCCT
GCATCGAATTGGCATGTAATCCAACATATATCAGCATCGCCAATGCACTT
AAACAATTATCGCGAAACGGTGGGAATTTTCCTCTGCAAGCCAACACTAC
GTCCAGCCGAGAACCAGTTCTTGGTAGTTCCCTTAGAGCGAGTGAAGAAG
ATGAAGCCCCAGGCCCAAAGACTTCTAGGGTACAAAGTCTGCGAGCCAGG
GGTTGGATTCATGTATTATCAGGATCCAATGAGGGCGTTGTTCGGCGTAG
AGGATGAAGAAACCGTTGATATGTGATGACTATCACCCACACGATGCGCA
ACTGCCCGTGATGATTGGCTGTGTGACTGCATTGACAAAGACAACCAAGG
AAAATGGAGCGACCGTTGCCATTCCGGGTTCACATCTCTGGGGCCCGGAG
CGGCGACCATTAGATGAGGAGGCCATTCCTGCAGAATTGGAACCCGGTGA
TGCGTTTATCTTCTTGGGGAATCTGTATCATGCTGGTGGTGCAAATGTCA
CAGACCCATCATCTCTAGCACGGCTGGGTTCCGAGTGACACCGGGAAGCA
AACAGCAGGTGCTTCACCGTGACGATAAATGATCTCTTCTAACAACAAGC
CTTCTTTCACACGCTTTAATGCTACCGCTACCTCTACTGATGTCCTCGTC
GAGGCAATCCGTCGAGACGGGGGAGTGATCGTAGAGAGCCTCATCACCCG
CGATGCAGCGGAGCAAATCAAACAAGATCTGAAGCCACACTTCGACAAAG
ATACACCAGACAAGTATGGTCTGTTCCCTCCGACAACCCAGCGTGCTACT
GGTCTGCTAGGCATCTCGGATGCCTGCATCGAATTGGCATGTAATCCAAC
ATATATCAGCATCGCCAATGCACTTAAACAATTATCGCGAAACGGTGGGA
ATTTTCCTCTGCAAGCCAACACTACGTCCAGCCGAGAACCAGTTCTTGGT
AGTTCCCTTAGAGCGAGTGAAGAAGATGAAGCCCCAGGCCCAAAGACTTC
TAGGGTACAAAGTCTGCGAGCCAGGGGTTGGATTCATGTATTATCAGGAT
CCAATGAGGGCGTTGTTCGGCGTAGAGGATGAAGAAACCGTTGATATGTG
ATGACTATCACCCACACGATGCGCAACTGCCCGTGATGATTGGCTGTGTG
ACTGCATTGACAAAGACAACCAAGGAAAATGGAGCGACCGTTGCCATTCC
GGGTTCACATCTCTGGGGCCCGGAGCGGCGACCATTAGATGAGGAGGCCA
TTCCTGCAGAATTGGAACCCGGTGATGCGTTTATCTTCTTGGGGAATCTG
TATCATGCTGGTGGTGCAAATGTCACAGACCCATCATCTCTAGCACGGCT
GGGTTCCGAGTGACACCGGGAAGCAAACAGCAGGTGCTTCACCGTGACGA
TAAATGATCTCTTCTAACAACAAGCCTTCTTTCACACGCTTTAATGCTAC
CGCTACCTCTACTGATGTCCTCGTCGAGGCAATCCGTCGAGACGGGGGAG
TGATCGTAGAGAGCCTCATCACCCGCGATGCAGCGGAGCAAATCAAACAA
GATCTGAAGCCACACTTCGACAAAGATACACCAGACAAGTATGGTCTGTT
CCCTCCGACAACCCAGCGTGCTACTGGTCTGCTAGGCATCTCGGATGCCT
GCATCGAATTGGCATGTAATCCAACATATATCAGCATCGCCAATGCACTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:355899..356886 - |
|
