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CAN33_0870-T1, CAN33_0870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0870-T1
Unique NameCAN33_0870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:441256..442479+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0870-T1 ID=CAN33_0870-T1|Name=CAN33_0870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1224bp|location=Sequence derived from alignment at NKJJ01000004.1:441256..442479+ (Aspergillus niger FDAARGOS_311)
ATGGTCGACGCTCCCGAGAGCCCGAGGCCCCAGGAACAAAGTGTGTAGGC
GATCGCATTGGGCTGCTCATCTGGGGCTGGATCCAATTTTTTCAAGGCCA
TGTCCTAAATCGCTAATGCGTGCCTAGCTCCCCAAAAGAATGTCTACCAG
AATGGGGTGAGAACCACAGGCCGGGCCTTCCACTCTCCCAACTGGCGTGT
GAAGCGCGAAGAGAGCCCTAGTGGGCAGAACGCCGCTGCCGGATCCCCCG
GTCCCAAGACAAGCACCTCGAGACTCGCATTCAGCAGACCCAGCCCGCAT
GTGCCCCAGGCTATTTCGGAGGGTCGCCGTCTCTATGTGGGCAACATGCC
CTACACGGCCAAGTCGGAGGATGTGCAGGCTCTCTTCGATGCGGCTGAGT
TCCGAATGTATGGATTCTTTGAACTGAAGACAACCGTGGGAGTTCCAAAC
TGAGTGCTTAATAGCGAGCGTATCGACATCGCCATCGATCCTTTCACCGG
CCGTAACCCCTCATACTGTTTCGTCGATCTGGAGACCAAGGAGCTGGCTG
AGCGCGCCATGACGGAATTGGACGGTCGGGACATGCTTGGTCGTCCCGTC
AAGATCAAGCCCGGTGTCGTGAAGACCCAGAGTGAACGGGCTCAGCAACA
GCAGCAACAGCAGCAGCGCTCCGATGCCTCCCCTCGTGAGACGCGGTCTT
CTCCGTTCAGCATGGACCGTTGGCGCCGCGGTGACGAGGCCCAGCCCCCG
CGCACTCCCTCGAAGACCACTACCACCACCACCGCCAGCACCCCCTCAAA
CAGTGATCCCAGCCGTCGCCTCTATGTTGGCGGCCTGCCGAGGTTGACGG
ACCAGGAGGCCATCACCAGCAACATGACCAACTTCTTCAAGGATTACAAT
GTGTATGGATCAGTCTTGAGTGCGTTGATTGTTCGGGATATGCTAACCTG
GCTGTATAGTGAGAATGTCAGCAAGCTGTTCGCTCCCCACCCCGCGAAGA
GGTTCGAGCCCGGTGACCACTACTACCTGTTCGTCGATTTCAGCAGCGTC
GAGGAGGCTGAGAACGCCATGAACGCTCTGAACCGGGCGGAAGGTCCCTG
GGGTGCCGTCCTCAGGGTTCAGAGAGCCCGTGGAGAGAACAACTCGCAAG
AGCGGAGACCCAAGTGGTCGTCCAGCCGGGACGAAGCCACCCCGGCTGCT
GAGGAGGTTGCAGTCGCTGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:441256..442479+

>CAN33_0870-T1 ID=CAN33_0870-T1|Name=CAN33_0870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3930bp|location=Sequence derived from alignment at NKJJ01000004.1:441256..442479+ (Aspergillus niger FDAARGOS_311)
ATGGTCGACGCTCCCGAGAGCCCGAGGCCCCAGGAACAAACTCCCCAAAA
GAATGTCTACCAGAATGGGGTGAGAACCACAGGCCGGGCCTTCCACTCTC
CCAACTGGCGTGTGAAGCGCGAAGAGAGCCCTAGTGGGCAGAACGCCGCT
GCCGGATCCCCCGGTCCCAAGACAAGCACCTCGAGACTCGCATTCAGCAG
ACCCAGCCCGCATGTGCCCCAGGCTATTTCGGAGGGTCGCCGTCTCTATG
TGGGCAACATGCCCTACACGGCCAAGTCGGAGGATGTGCAGGCTCTCTTC
GATGCGGCTGAGTTCCGAATCGAGCGTATCGACATCGCCATCGATCCTTT
CACCGGCCGTAACCCCTCATACTGTTTCGTCGATCTGGAGACCAAGGAGC
TGGCTGAGCGCGCCATGACGGAATTGGACGGTCGGGACATGCTTGGTCGT
CCCGTCAAGATCAAGCCCGGTGTCGAGGCCATCACCAGCAACATGACCAA
CTTCTTCAAGGATTACAATGTTGAGAATGTCAGCAAGCTGTTCGCTCCCC
ACCCCGCGAAGAGGTTCGAGCCCGGTGACCACTACTACCTGTTCGTCGAT
TTCAGCAGCGTCGAGGAGGCTGAGAACGCCATGAACGCTCTGAACCGGGC
GGAAGGTCCCTGGGGTGCCGTCCTCAGGGTTCAGAGAGCCCGTGGAGAGA
ACAACTCGCAAGAGCGGAGACCCAAGTGGTCGTCCAGCCGGGACGAAGCC
ACCCCGGCTGCTGAGGAGGTTGCAGTCGCTGCATAGATGGTCGACGCTCC
CGAGAGCCCGAGGCCCCAGGAACAAACTCCCCAAAAGAATGTCTACCAGA
ATGGGGTGAGAACCACAGGCCGGGCCTTCCACTCTCCCAACTGGCGTGTG
AAGCGCGAAGAGAGCCCTAGTGGGCAGAACGCCGCTGCCGGATCCCCCGG
TCCCAAGACAAGCACCTCGAGACTCGCATTCAGCAGACCCAGCCCGCATG
TGCCCCAGGCTATTTCGGAGGGTCGCCGTCTCTATGTGGGCAACATGCCC
TACACGGCCAAGTCGGAGGATGTGCAGGCTCTCTTCGATGCGGCTGAGTT
CCGAATCGAGCGTATCGACATCGCCATCGATCCTTTCACCGGCCGTAACC
CCTCATACTGTTTCGTCGATCTGGAGACCAAGGAGCTGGCTGAGCGCGCC
ATGACGGAATTGGACGGTCGGGACATGCTTGGTCGTCCCGTCAAGATCAA
GCCCGGTGTCGAGGCCATCACCAGCAACATGACCAACTTCTTCAAGGATT
ACAATGTTGAGAATGTCAGCAAGCTGTTCGCTCCCCACCCCGCGAAGAGG
TTCGAGCCCGGTGACCACTACTACCTGTTCGTCGATTTCAGCAGCGTCGA
GGAGGCTGAGAACGCCATGAACGCTCTGAACCGGGCGGAAGGTCCCTGGG
GTGCCGTCCTCAGGGTTCAGAGAGCCCGTGGAGAGAACAACTCGCAAGAG
CGGAGACCCAAGTGGTCGTCCAGCCGGGACGAAGCCACCCCGGCTGCTGA
GGAGGTTGCAGTCGCTGCATAGATGGTCGACGCTCCCGAGAGCCCGAGGC
CCCAGGAACAAACTCCCCAAAAGAATGTCTACCAGAATGGGGTGAGAACC
ACAGGCCGGGCCTTCCACTCTCCCAACTGGCGTGTGAAGCGCGAAGAGAG
CCCTAGTGGGCAGAACGCCGCTGCCGGATCCCCCGGTCCCAAGACAAGCA
CCTCGAGACTCGCATTCAGCAGACCCAGCCCGCATGTGCCCCAGGCTATT
TCGGAGGGTCGCCGTCTCTATGTGGGCAACATGCCCTACACGGCCAAGTC
GGAGGATGTGCAGGCTCTCTTCGATGCGGCTGAGTTCCGAATCGAGCGTA
TCGACATCGCCATCGATCCTTTCACCGGCCGTAACCCCTCATACTGTTTC
GTCGATCTGGAGACCAAGGAGCTGGCTGAGCGCGCCATGACGGAATTGGA
CGGTCGGGACATGCTTGGTCGTCCCGTCAAGATCAAGCCCGGTGTCGAGG
CCATCACCAGCAACATGACCAACTTCTTCAAGGATTACAATGTTGAGAAT
GTCAGCAAGCTGTTCGCTCCCCACCCCGCGAAGAGGTTCGAGCCCGGTGA
CCACTACTACCTGTTCGTCGATTTCAGCAGCGTCGAGGAGGCTGAGAACG
CCATGAACGCTCTGAACCGGGCGGAAGGTCCCTGGGGTGCCGTCCTCAGG
GTTCAGAGAGCCCGTGGAGAGAACAACTCGCAAGAGCGGAGACCCAAGTG
GTCGTCCAGCCGGGACGAAGCCACCCCGGCTGCTGAGGAGGTTGCAGTCG
CTGCATAGATGGTCGACGCTCCCGAGAGCCCGAGGCCCCAGGAACAAACT
CCCCAAAAGAATGTCTACCAGAATGGGGTGAGAACCACAGGCCGGGCCTT
CCACTCTCCCAACTGGCGTGTGAAGCGCGAAGAGAGCCCTAGTGGGCAGA
ACGCCGCTGCCGGATCCCCCGGTCCCAAGACAAGCACCTCGAGACTCGCA
TTCAGCAGACCCAGCCCGCATGTGCCCCAGGCTATTTCGGAGGGTCGCCG
TCTCTATGTGGGCAACATGCCCTACACGGCCAAGTCGGAGGATGTGCAGG
CTCTCTTCGATGCGGCTGAGTTCCGAATCGAGCGTATCGACATCGCCATC
GATCCTTTCACCGGCCGTAACCCCTCATACTGTTTCGTCGATCTGGAGAC
CAAGGAGCTGGCTGAGCGCGCCATGACGGAATTGGACGGTCGGGACATGC
TTGGTCGTCCCGTCAAGATCAAGCCCGGTGTCGAGGCCATCACCAGCAAC
ATGACCAACTTCTTCAAGGATTACAATGTTGAGAATGTCAGCAAGCTGTT
CGCTCCCCACCCCGCGAAGAGGTTCGAGCCCGGTGACCACTACTACCTGT
TCGTCGATTTCAGCAGCGTCGAGGAGGCTGAGAACGCCATGAACGCTCTG
AACCGGGCGGAAGGTCCCTGGGGTGCCGTCCTCAGGGTTCAGAGAGCCCG
TGGAGAGAACAACTCGCAAGAGCGGAGACCCAAGTGGTCGTCCAGCCGGG
ACGAAGCCACCCCGGCTGCTGAGGAGGTTGCAGTCGCTGCATAGATGGTC
GACGCTCCCGAGAGCCCGAGGCCCCAGGAACAAACTCCCCAAAAGAATGT
CTACCAGAATGGGGTGAGAACCACAGGCCGGGCCTTCCACTCTCCCAACT
GGCGTGTGAAGCGCGAAGAGAGCCCTAGTGGGCAGAACGCCGCTGCCGGA
TCCCCCGGTCCCAAGACAAGCACCTCGAGACTCGCATTCAGCAGACCCAG
CCCGCATGTGCCCCAGGCTATTTCGGAGGGTCGCCGTCTCTATGTGGGCA
ACATGCCCTACACGGCCAAGTCGGAGGATGTGCAGGCTCTCTTCGATGCG
GCTGAGTTCCGAATCGAGCGTATCGACATCGCCATCGATCCTTTCACCGG
CCGTAACCCCTCATACTGTTTCGTCGATCTGGAGACCAAGGAGCTGGCTG
AGCGCGCCATGACGGAATTGGACGGTCGGGACATGCTTGGTCGTCCCGTC
AAGATCAAGCCCGGTGTCGAGGCCATCACCAGCAACATGACCAACTTCTT
CAAGGATTACAATGTTGAGAATGTCAGCAAGCTGTTCGCTCCCCACCCCG
CGAAGAGGTTCGAGCCCGGTGACCACTACTACCTGTTCGTCGATTTCAGC
AGCGTCGAGGAGGCTGAGAACGCCATGAACGCTCTGAACCGGGCGGAAGG
TCCCTGGGGTGCCGTCCTCAGGGTTCAGAGAGCCCGTGGAGAGAACAACT
CGCAAGAGCGGAGACCCAAGTGGTCGTCCAGCCGGGACGAAGCCACCCCG
GCTGCTGAGGAGGTTGCAGTCGCTGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0870CAN33_0870Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0870-T1CAN33_0870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0870-T1.exon1CAN33_0870-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_0870-T1.exon2CAN33_0870-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0870-T1.exon3CAN33_0870-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0870-T1.exon4CAN33_0870-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_0870-T1.exon5CAN33_0870-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0870-T1.cdsCAN33_0870-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif (RRM RBD or RNP domain) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:441256..442479 +
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