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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:447541..449978+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_0885-T1 ID=CAN33_0885-T1|Name=CAN33_0885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2438bp|location=Sequence derived from alignment at NKJJ01000004.1:447541..449978+ (Aspergillus niger FDAARGOS_311)
ATGAGTTATATGGGGCTTGGGGGCAGTGCGCCGAAGCCGTTGGCGACGAG
GTTGAAGGAGGGCCAGGTGTTGCTGGCTAAGGATATTAACACGCATTTTA
TTGATGTGCAGGGAAATTCGCTGGGGAGGAGACAAATTCCGTGGAGTCAT
GCGCCGGCGGATATTGGGTACTCGTATCCGTTCTTGTTGGCGCTGCATGA
TTCCTCGAAGGGAGTGTTGGAGGTACGAAATCCGGAGACGTTGTCGCTGT
TGCAGTCGGTTCCGTTGCCATCAGCAAGTATTATGCATATCCCGCAGCCA
ACGATTAGTCTGGCGCATGCTGGGAAGGGGTTCTTGGTGGCGAGTGATCG
GACGATATGGCGGATGGAGGCGCTGAGTTATGATACGCAGATTGACTCGC
TGGTCGAGAAGGGGTATCTGGACGAAGCGATCAGTCTGGCCAGTATGCTG
GAGGATGCGCTGCTGAGGGATAAGCAGGGCCGGCTGCGCCAGATCAAGCT
GGAGAAGGCTGAAGGGCTGTTCAAGATGCGAAAGTACACCGATTCGATGG
ATCTGTTTACGGAGATATCTGCGCCTCCGGAGACGGTGATACGACTGTAT
CCGAAGATCATCGCCGGGGAGCTGTCGTCGATTGTTGAGGAGCCGGAGGA
GTCAGAAGATGGAACGACAGACAGCCAGCCCAAGACGCAGGAGAACAACA
ACCCGACGGACGCGCCGGCTACGGAGGAAACGCCAGCGCCGAAGACACTC
TCGCATGCTCCGTCTGTGATGTCACTTTTACGGACGCGGACAGATGACGG
CAGTGATGCGGGCAGTATTCGTGGCAAGGTTGTCGAGGAGGCCAAGAACG
ACAAGGCGCTGGAAGGTGCCGATCTCAAGCTGGCTGTTCGTGACCTGCAG
AGATATCTGGCAGATGTGCGGAGGCGGTTCCAGCGCTTCTTGAACCCGGA
TGGCACGCTAAAGGTGATTGATGCGACGACGGACGGCGCGAACGATGCCT
TAACGGACTCGGTCATGAAGCTGCTGAGCATTGATCCGGAGGGTGAGTAC
GATCTCGGGGAGAAGCTGCGGGAAAAGGCCAGGCTCGTGGACACGACTCT
CTTCCGAGCGTACATGTACGCTATTCCAGCTCTGGCAGGCTCGTTGTTCC
GCATTGCCAACTTCTGTGATCCAGATGTGGTGATGGAAAAATTGGAGGAG
ACGGGGCGTCACAACGATCTGATTGACTTTTTGTACGGAAAGAAGCTGCA
CCGACAAGCGTTGGAGCTGCTTCAGAAGTTCGGACAGGCCGACGATGAAG
AAGAGACGGCGCCGCAGCTGCACGGGCCGAAGCGAACAGTCAATTATCTA
CAGAATCTGTCTCCAGACCATATTGACTTGATCCTCGAGTTCGCTGAATG
GCCAGTACGACAGGATCCTGAGCTGGGCATGGAGATATTCCTGGCAGATA
CGGAGAACGCGGAGACGCTGCCGCGGGAACGAGTGCTAGACTTCCTGCAG
GGCATTGATGTCAATCTGGCCGTCCGCTACCTGGAGCATATCATTGGGGA
GTTGAATGATATGACACCGGATCTGCATCAGAAACTGCTCATCCTGTACT
TGAACCGGCTGAAGAAGCACCAGGCTAAAGAGTGGGAGTTCTCTAGTCTG
GATGACTATGTTAATTGGCAGAGCAAGTTCTTGAATATGCTCAGGTCCAG
CTCTCAGTATTCTCCGGCTAAGATTCTGGATCGATTGGACCGAGACGGTG
AGTACCCTCCTTGCGCTTACATTGCGTTGCTGACTTGTAGAAAGATCCTG
AATTCTTCGAGGCACGAGCGATTGTCTTCAGCAAGATGGGGCAACACCGG
CAGGCACTGGAGATTTATGTATTCAAGTTGGAAGACTACGTCAAGGCTGA
AGAGTGAGTTGCATTGATCGATATACATGAGTTCTGCTGACCGTTCAGAT
ACTGTAATCATCTCCATAAAGTGGAGGATACGACTGCTGCGGATGGATCG
GTTTCGCGCTGCGTAGCTCTACTACCATACGAAGATGACAAACCATCAAT
TTATTTGACTCTATTGTCTCTATATCTATCTCCGCCGCATGGCTACAAGC
CACGGTACGGGCCCGCGCTTGAGGTGCTGGCCAAACATGGATCCCGGCTG
CCACCCAATTCTGCTCTGGATCTGATCCCAGAATCGCTCCCGGTCAAGGA
GCTCGAGTTCTATTTCAAGGGCCGTATGCGGGCCGCCAACACAATCCTTA
ACGAGAGCCGGATCGTGGCCAACCTTCAAAAGGCAGAAGACATCAAGACA
CAGGCGCAGTTATTGGTAGGAGAGGGAACGGACGGGCGATCGACGCGCTC
ACGACATGTCACCATCACCGAAGAGCGGGTCTGCGGCATCTGCCACAAGC
GGATCGGAGGCAGTGTGATTAATGTGTTTCCGGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:447541..449978+ >CAN33_0885-T1 ID=CAN33_0885-T1|Name=CAN33_0885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7038bp|location=Sequence derived from alignment at NKJJ01000004.1:447541..449978+ (Aspergillus niger FDAARGOS_311)
ATGAGTTATATGGGGCTTGGGGGCAGTGCGCCGAAGCCGTTGGCGACGAG
GTTGAAGGAGGGCCAGGTGTTGCTGGCTAAGGATATTAACACGCATTTTA
TTGATGTGCAGGGAAATTCGCTGGGGAGGAGACAAATTCCGTGGAGTCAT
GCGCCGGCGGATATTGGGTACTCGTATCCGTTCTTGTTGGCGCTGCATGA
TTCCTCGAAGGGAGTGTTGGAGGTACGAAATCCGGAGACGTTGTCGCTGT
TGCAGTCGGTTCCGTTGCCATCAGCAAGTATTATGCATATCCCGCAGCCA
ACGATTAGTCTGGCGCATGCTGGGAAGGGGTTCTTGGTGGCGAGTGATCG
GACGATATGGCGGATGGAGGCGCTGAGTTATGATACGCAGATTGACTCGC
TGGTCGAGAAGGGGTATCTGGACGAAGCGATCAGTCTGGCCAGTATGCTG
GAGGATGCGCTGCTGAGGGATAAGCAGGGCCGGCTGCGCCAGATCAAGCT
GGAGAAGGCTGAAGGGCTGTTCAAGATGCGAAAGTACACCGATTCGATGG
ATCTGTTTACGGAGATATCTGCGCCTCCGGAGACGGTGATACGACTGTAT
CCGAAGATCATCGCCGGGGAGCTGTCGTCGATTGTTGAGGAGCCGGAGGA
GTCAGAAGATGGAACGACAGACAGCCAGCCCAAGACGCAGGAGAACAACA
ACCCGACGGACGCGCCGGCTACGGAGGAAACGCCAGCGCCGAAGACACTC
TCGCATGCTCCGTCTGTGATGTCACTTTTACGGACGCGGACAGATGACGG
CAGTGATGCGGGCAGTATTCGTGGCAAGGTTGTCGAGGAGGCCAAGAACG
ACAAGGCGCTGGAAGGTGCCGATCTCAAGCTGGCTGTTCGTGACCTGCAG
AGATATCTGGCAGATGTGCGGAGGCGGTTCCAGCGCTTCTTGAACCCGGA
TGGCACGCTAAAGGTGATTGATGCGACGACGGACGGCGCGAACGATGCCT
TAACGGACTCGGTCATGAAGCTGCTGAGCATTGATCCGGAGGGTGAGTAC
GATCTCGGGGAGAAGCTGCGGGAAAAGGCCAGGCTCGTGGACACGACTCT
CTTCCGAGCGTACATGTACGCTATTCCAGCTCTGGCAGGCTCGTTGTTCC
GCATTGCCAACTTCTGTGATCCAGATGTGGTGATGGAAAAATTGGAGGAG
ACGGGGCGTCACAACGATCTGATTGACTTTTTGTACGGAAAGAAGCTGCA
CCGACAAGCGTTGGAGCTGCTTCAGAAGTTCGGACAGGCCGACGATGAAG
AAGAGACGGCGCCGCAGCTGCACGGGCCGAAGCGAACAGTCAATTATCTA
CAGAATCTGTCTCCAGACCATATTGACTTGATCCTCGAGTTCGCTGAATG
GCCAGTACGACAGGATCCTGAGCTGGGCATGGAGATATTCCTGGCAGATA
CGGAGAACGCGGAGACGCTGCCGCGGGAACGAGTGCTAGACTTCCTGCAG
GGCATTGATGTCAATCTGGCCGTCCGCTACCTGGAGCATATCATTGGGGA
GTTGAATGATATGACACCGGATCTGCATCAGAAACTGCTCATCCTGTACT
TGAACCGGCTGAAGAAGCACCAGGCTAAAGAGTGGGAGTTCTCTAGTCTG
GATGACTATGTTAATTGGCAGAGCAAGTTCTTGAATATGCTCAGGTCCAG
CTCTCAGTATTCTCCGGCTAAGATTCTGGATCGATTGGACCGAGACGATC
CTGAATTCTTCGAGGCACGAGCGATTGTCTTCAGCAAGATGGGGCAACAC
CGGCAGGCACTGGAGATTTATGTATTCAAGTTGGAAGACTACGTCAAGGC
TGAAGAATACTGTAATCATCTCCATAAAGTGGAGGATACGACTGCTGCGG
ATGGATCGGTTTCGCGCTGCGTAGCTCTACTACCATACGAAGATGACAAA
CCATCAATTTATTTGACTCTATTGTCTCTATATCTATCTCCGCCGCATGG
CTACAAGCCACGGTACGGGCCCGCGCTTGAGGTGCTGGCCAAACATGGAT
CCCGGCTGCCACCCAATTCTGCTCTGGATCTGATCCCAGAATCGCTCCCG
GTCAAGGAGCTCGAGTTCTATTTCAAGGGCCGTATGCGGGCCGCCAACAC
AATCCTTAACGAGAGCCGGATCGTGGCCAACCTTCAAAAGGCAGAAGACA
TCAAGACACAGGCGCAGTTATTGGTAGGAGAGGGAACGGACGGGCGATCG
ACGCGCTCACGACATGTCACCATCACCGAAGAGCGGGTCTGCGGCATCTG
CCACAAGCGGATCGGAGGCAGTGTGATTAATGTGTTTCCGGAGTAAATGA
GTTATATGGGGCTTGGGGGCAGTGCGCCGAAGCCGTTGGCGACGAGGTTG
AAGGAGGGCCAGGTGTTGCTGGCTAAGGATATTAACACGCATTTTATTGA
TGTGCAGGGAAATTCGCTGGGGAGGAGACAAATTCCGTGGAGTCATGCGC
CGGCGGATATTGGGTACTCGTATCCGTTCTTGTTGGCGCTGCATGATTCC
TCGAAGGGAGTGTTGGAGGTACGAAATCCGGAGACGTTGTCGCTGTTGCA
GTCGGTTCCGTTGCCATCAGCAAGTATTATGCATATCCCGCAGCCAACGA
TTAGTCTGGCGCATGCTGGGAAGGGGTTCTTGGTGGCGAGTGATCGGACG
ATATGGCGGATGGAGGCGCTGAGTTATGATACGCAGATTGACTCGCTGGT
CGAGAAGGGGTATCTGGACGAAGCGATCAGTCTGGCCAGTATGCTGGAGG
ATGCGCTGCTGAGGGATAAGCAGGGCCGGCTGCGCCAGATCAAGCTGGAG
AAGGCTGAAGGGCTGTTCAAGATGCGAAAGTACACCGATTCGATGGATCT
GTTTACGGAGATATCTGCGCCTCCGGAGACGGTGATACGACTGTATCCGA
AGATCATCGCCGGGGAGCTGTCGTCGATTGTTGAGGAGCCGGAGGAGTCA
GAAGATGGAACGACAGACAGCCAGCCCAAGACGCAGGAGAACAACAACCC
GACGGACGCGCCGGCTACGGAGGAAACGCCAGCGCCGAAGACACTCTCGC
ATGCTCCGTCTGTGATGTCACTTTTACGGACGCGGACAGATGACGGCAGT
GATGCGGGCAGTATTCGTGGCAAGGTTGTCGAGGAGGCCAAGAACGACAA
GGCGCTGGAAGGTGCCGATCTCAAGCTGGCTGTTCGTGACCTGCAGAGAT
ATCTGGCAGATGTGCGGAGGCGGTTCCAGCGCTTCTTGAACCCGGATGGC
ACGCTAAAGGTGATTGATGCGACGACGGACGGCGCGAACGATGCCTTAAC
GGACTCGGTCATGAAGCTGCTGAGCATTGATCCGGAGGGTGAGTACGATC
TCGGGGAGAAGCTGCGGGAAAAGGCCAGGCTCGTGGACACGACTCTCTTC
CGAGCGTACATGTACGCTATTCCAGCTCTGGCAGGCTCGTTGTTCCGCAT
TGCCAACTTCTGTGATCCAGATGTGGTGATGGAAAAATTGGAGGAGACGG
GGCGTCACAACGATCTGATTGACTTTTTGTACGGAAAGAAGCTGCACCGA
CAAGCGTTGGAGCTGCTTCAGAAGTTCGGACAGGCCGACGATGAAGAAGA
GACGGCGCCGCAGCTGCACGGGCCGAAGCGAACAGTCAATTATCTACAGA
ATCTGTCTCCAGACCATATTGACTTGATCCTCGAGTTCGCTGAATGGCCA
GTACGACAGGATCCTGAGCTGGGCATGGAGATATTCCTGGCAGATACGGA
GAACGCGGAGACGCTGCCGCGGGAACGAGTGCTAGACTTCCTGCAGGGCA
TTGATGTCAATCTGGCCGTCCGCTACCTGGAGCATATCATTGGGGAGTTG
AATGATATGACACCGGATCTGCATCAGAAACTGCTCATCCTGTACTTGAA
CCGGCTGAAGAAGCACCAGGCTAAAGAGTGGGAGTTCTCTAGTCTGGATG
ACTATGTTAATTGGCAGAGCAAGTTCTTGAATATGCTCAGGTCCAGCTCT
CAGTATTCTCCGGCTAAGATTCTGGATCGATTGGACCGAGACGATCCTGA
ATTCTTCGAGGCACGAGCGATTGTCTTCAGCAAGATGGGGCAACACCGGC
AGGCACTGGAGATTTATGTATTCAAGTTGGAAGACTACGTCAAGGCTGAA
GAATACTGTAATCATCTCCATAAAGTGGAGGATACGACTGCTGCGGATGG
ATCGGTTTCGCGCTGCGTAGCTCTACTACCATACGAAGATGACAAACCAT
CAATTTATTTGACTCTATTGTCTCTATATCTATCTCCGCCGCATGGCTAC
AAGCCACGGTACGGGCCCGCGCTTGAGGTGCTGGCCAAACATGGATCCCG
GCTGCCACCCAATTCTGCTCTGGATCTGATCCCAGAATCGCTCCCGGTCA
AGGAGCTCGAGTTCTATTTCAAGGGCCGTATGCGGGCCGCCAACACAATC
CTTAACGAGAGCCGGATCGTGGCCAACCTTCAAAAGGCAGAAGACATCAA
GACACAGGCGCAGTTATTGGTAGGAGAGGGAACGGACGGGCGATCGACGC
GCTCACGACATGTCACCATCACCGAAGAGCGGGTCTGCGGCATCTGCCAC
AAGCGGATCGGAGGCAGTGTGATTAATGTGTTTCCGGAGTAAATGAGTTA
TATGGGGCTTGGGGGCAGTGCGCCGAAGCCGTTGGCGACGAGGTTGAAGG
AGGGCCAGGTGTTGCTGGCTAAGGATATTAACACGCATTTTATTGATGTG
CAGGGAAATTCGCTGGGGAGGAGACAAATTCCGTGGAGTCATGCGCCGGC
GGATATTGGGTACTCGTATCCGTTCTTGTTGGCGCTGCATGATTCCTCGA
AGGGAGTGTTGGAGGTACGAAATCCGGAGACGTTGTCGCTGTTGCAGTCG
GTTCCGTTGCCATCAGCAAGTATTATGCATATCCCGCAGCCAACGATTAG
TCTGGCGCATGCTGGGAAGGGGTTCTTGGTGGCGAGTGATCGGACGATAT
GGCGGATGGAGGCGCTGAGTTATGATACGCAGATTGACTCGCTGGTCGAG
AAGGGGTATCTGGACGAAGCGATCAGTCTGGCCAGTATGCTGGAGGATGC
GCTGCTGAGGGATAAGCAGGGCCGGCTGCGCCAGATCAAGCTGGAGAAGG
CTGAAGGGCTGTTCAAGATGCGAAAGTACACCGATTCGATGGATCTGTTT
ACGGAGATATCTGCGCCTCCGGAGACGGTGATACGACTGTATCCGAAGAT
CATCGCCGGGGAGCTGTCGTCGATTGTTGAGGAGCCGGAGGAGTCAGAAG
ATGGAACGACAGACAGCCAGCCCAAGACGCAGGAGAACAACAACCCGACG
GACGCGCCGGCTACGGAGGAAACGCCAGCGCCGAAGACACTCTCGCATGC
TCCGTCTGTGATGTCACTTTTACGGACGCGGACAGATGACGGCAGTGATG
CGGGCAGTATTCGTGGCAAGGTTGTCGAGGAGGCCAAGAACGACAAGGCG
CTGGAAGGTGCCGATCTCAAGCTGGCTGTTCGTGACCTGCAGAGATATCT
GGCAGATGTGCGGAGGCGGTTCCAGCGCTTCTTGAACCCGGATGGCACGC
TAAAGGTGATTGATGCGACGACGGACGGCGCGAACGATGCCTTAACGGAC
TCGGTCATGAAGCTGCTGAGCATTGATCCGGAGGGTGAGTACGATCTCGG
GGAGAAGCTGCGGGAAAAGGCCAGGCTCGTGGACACGACTCTCTTCCGAG
CGTACATGTACGCTATTCCAGCTCTGGCAGGCTCGTTGTTCCGCATTGCC
AACTTCTGTGATCCAGATGTGGTGATGGAAAAATTGGAGGAGACGGGGCG
TCACAACGATCTGATTGACTTTTTGTACGGAAAGAAGCTGCACCGACAAG
CGTTGGAGCTGCTTCAGAAGTTCGGACAGGCCGACGATGAAGAAGAGACG
GCGCCGCAGCTGCACGGGCCGAAGCGAACAGTCAATTATCTACAGAATCT
GTCTCCAGACCATATTGACTTGATCCTCGAGTTCGCTGAATGGCCAGTAC
GACAGGATCCTGAGCTGGGCATGGAGATATTCCTGGCAGATACGGAGAAC
GCGGAGACGCTGCCGCGGGAACGAGTGCTAGACTTCCTGCAGGGCATTGA
TGTCAATCTGGCCGTCCGCTACCTGGAGCATATCATTGGGGAGTTGAATG
ATATGACACCGGATCTGCATCAGAAACTGCTCATCCTGTACTTGAACCGG
CTGAAGAAGCACCAGGCTAAAGAGTGGGAGTTCTCTAGTCTGGATGACTA
TGTTAATTGGCAGAGCAAGTTCTTGAATATGCTCAGGTCCAGCTCTCAGT
ATTCTCCGGCTAAGATTCTGGATCGATTGGACCGAGACGATCCTGAATTC
TTCGAGGCACGAGCGATTGTCTTCAGCAAGATGGGGCAACACCGGCAGGC
ACTGGAGATTTATGTATTCAAGTTGGAAGACTACGTCAAGGCTGAAGAAT
ACTGTAATCATCTCCATAAAGTGGAGGATACGACTGCTGCGGATGGATCG
GTTTCGCGCTGCGTAGCTCTACTACCATACGAAGATGACAAACCATCAAT
TTATTTGACTCTATTGTCTCTATATCTATCTCCGCCGCATGGCTACAAGC
CACGGTACGGGCCCGCGCTTGAGGTGCTGGCCAAACATGGATCCCGGCTG
CCACCCAATTCTGCTCTGGATCTGATCCCAGAATCGCTCCCGGTCAAGGA
GCTCGAGTTCTATTTCAAGGGCCGTATGCGGGCCGCCAACACAATCCTTA
ACGAGAGCCGGATCGTGGCCAACCTTCAAAAGGCAGAAGACATCAAGACA
CAGGCGCAGTTATTGGTAGGAGAGGGAACGGACGGGCGATCGACGCGCTC
ACGACATGTCACCATCACCGAAGAGCGGGTCTGCGGCATCTGCCACAAGC
GGATCGGAGGCAGTGTGATTAATGTGTTTCCGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260OCI |
| DBxref | InterPro:IPR000547 |
| DBxref | InterPro:IPR019453 |
| DBxref | InterPro:IPR019452 |
| DBxref | InterPro:IPR001180 |
| DBxref | PFAM:PF10367 |
| DBxref | PFAM:PF10366 |
| Product | Vacuolar sorting protein 39 domain 1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:447541..449978 + |
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