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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:463390..464347- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_0910-T1 ID=CAN33_0910-T1|Name=CAN33_0910-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=958bp|location=Sequence derived from alignment at NKJJ01000004.1:463390..464347- (Aspergillus niger FDAARGOS_311)
ATGGTAAGTCGTCTAAGGCCTCAAAAGTGAAGCCTCGCTTTGAGGGGGTT
GATTGCCATGCCTGATGGGTGCTTACATTGTCTATTGCTTAGAATTCCCT
CTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATA
CCTTTTCCCAATCTCCAGCTACCTCATCTGCCGCACTACAAGGTAGGTTT
CGAAACCGGTGCTTGTAGTGGCTCCACTACGCAACAGAAGGAAGCTCATG
CGCATTGTAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGT
TGACGACTACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAG
AGAAGGCATTCGAACGAGTCAAGAATTTCCGATCAGAACTGGCAGATTAC
CGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTGTAAGAAT
TTGCACTCAAATCTTCAAGCAGCGTTGAGACTCGATATGGCTGACCATGG
TTTATCTATAGCAATCCGTCACCAACCGCAATGAGCTCCTCGGTCGACGT
CCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCC
CCAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTG
GAGCCTCGCCAGCCGACTACAACCGGGAAACACATGCGCTTCGCGAACAA
AGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGG
TCGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCA
CACAACGTCGACTCTACAGCGTTGCAAACACACTGGGCGTCAGCGGCGAC
ACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTG
GGGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCT
TGCGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:463390..464347- >CAN33_0910-T1 ID=CAN33_0910-T1|Name=CAN33_0910-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2928bp|location=Sequence derived from alignment at NKJJ01000004.1:463390..464347- (Aspergillus niger FDAARGOS_311)
CAATCCGTCACCAACCGCAATGAGCTCCTCGGTCGACGTCCCCATCACAC
AGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCCCCAGTCCTCTG
CGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCA
GCCGACTACAACCGGGAAACACATGCGCTTCGCGAACAAAGCTTCCTAGC
GAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGGTCGTGCTGTGC
TTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGA
CTCTACAGCGTTGCAAACACACTGGGCGTCAGCGGCGACACAATCCGCAA
GGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGGGGTGGTGTAG
TCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAGGCC
AAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGACTACTCT
GCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGA
ACGAGTCAAGAATTTCCGATCAGAACTGGCAGATTACCGGCAACACTTTG
ATCGACTACGGAAAGAACGAGAGGAAGCTAATTCCCTCTTCAATTCCGCC
CTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATC
TCCAGCTACCTCATCTGCCGCACTACAAGATGCAATCCGTCACCAACCGC
AATGAGCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCC
ATATGCTCAATCATCCCTCCCCCAGTCCTCTGCGTTCGGCCCTTCTTCGT
CACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCGGGAA
ACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGAT
TGATGAGTTTCTTGATCGGGGTCGTGCTGTGCTTGCGGATCTGGGACAGC
AGCGTGAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGCAAAC
ACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAG
ACAAGACAAGTGGATCTTCTGGGGTGGTGTAGTCCTATTCTTCCTGTTCT
GCTGGGCTGTCCTGCACTTCTTGCGATAGGCCAAATCGCTGCATCGCTAG
CATCGTTATCGCGCACCGTTGACGACTACTCTGCCCTGTCCAAGAAGGAA
TTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAATTTCCG
ATCAGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAAC
GAGAGGAAGCTAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCT
ATCCGCCGTGACCTGGATACCTTTTCCCAATCTCCAGCTACCTCATCTGC
CGCACTACAAGATGCAATCCGTCACCAACCGCAATGAGCTCCTCGGTCGA
CGTCCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCT
CCCCCAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCT
TTGGAGCCTCGCCAGCCGACTACAACCGGGAAACACATGCGCTTCGCGAA
CAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCG
GGGTCGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGG
GCACACAACGTCGACTCTACAGCGTTGCAAACACACTGGGCGTCAGCGGC
GACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTT
CTGGGGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACT
TCTTGCGATAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCG
TTGACGACTACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAA
GAGAAGGCATTCGAACGAGTCAAGAATTTCCGATCAGAACTGGCAGATTA
CCGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTAATTCCC
TCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGAT
ACCTTTTCCCAATCTCCAGCTACCTCATCTGCCGCACTACAAGATGCAAT
CCGTCACCAACCGCAATGAGCTCCTCGGTCGACGTCCCCATCACACAGCT
ACACCAGAGAACCCATATGCTCAATCATCCCTCCCCCAGTCCTCTGCGTT
CGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCG
ACTACAACCGGGAAACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGC
ACCAACACCCAGATTGATGAGTTTCTTGATCGGGGTCGTGCTGTGCTTGC
GGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGACTCT
ACAGCGTTGCAAACACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTT
GAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGGGGTGGTGTAGTCCT
ATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAGGCCAAAT
CGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGACTACTCTGCCC
TGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGA
GTCAAGAATTTCCGATCAGAACTGGCAGATTACCGGCAACACTTTGATCG
ACTACGGAAAGAACGAGAGGAAGCTAATTCCCTCTTCAATTCCGCCCTCA
AGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATCTCCA
GCTACCTCATCTGCCGCACTACAAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005794 | Golgi apparatus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005484 | SNAP receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027027 |
| DBxref | PFAM:PF12352 |
| Product | Snare region anchored in the vesicle membrane C-terminus family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:463390..464347 - |
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