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CAN33_0965-T1, CAN33_0965-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0965-T1
Unique NameCAN33_0965-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:501742..503981-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0965-T1 ID=CAN33_0965-T1|Name=CAN33_0965-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2240bp|location=Sequence derived from alignment at NKJJ01000004.1:501742..503981- (Aspergillus niger FDAARGOS_311)
ATGGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATGCTCAGGC
TATTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACTTCCGGTG
CGTTCACCCTCTTTCCGCCCCTAAGGGGATTGGAACTTGCCAACACTCGC
ATCATGACACCCAGGATCGCAATCGCATCAGGGATCTCCCGAGAAAAAGA
CCGAGACTGTTTCGGATACTGATAATCCGCTAGATGCACCCGCTTCACCC
AAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAAGAGATGGGCGGCAC
CGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGAGGATCTCGCTGATG
TTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATGAACAGCCGGCGCAG
GCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACATCTCGTTTCGCAAAC
CCACGCCATCATCCTCCCCAGCTACTCTACCTGGTTCGACATGCACCTCA
TCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCTTCAACGGCAGAAAC
CGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGTGATTTCATGATCAA
CACCTACCGTTTGAACCCCATTGAGTACCTCACAGTCACTGCGTGCCGCC
GCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTGTGCACTCCTTCCTG
GAACAATGGGGTCTCATCAACTACCAGGTAAGTATCTGCCCGGTGCCGAC
CTCAGGCCTGAGGTGCTGATACCTTGACTCAGGTGGATCCCCAAACGCGT
CCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGTGGTCGCCGA
TACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACCACTTTGTCA
AGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCAGCGACCCCA
GCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGTGTATGATGA
TAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACAAGCAGACCA
ACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACCAAGGCGATG
GAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTTCTCTTGCGG
CATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAACACCCGCAA
CCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGCCCCAACTGC
TTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGACTTCGTCAA
GCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATGCGCCATGGT
CGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAACTTTGACGAC
AACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAAGGAGGAGTG
CGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATCTGGATGACA
TGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGCCAGGCCGAG
AACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGCTGAGCCTGC
AGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCCGCAAGGAAT
TGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAGGGCAAGGAG
AAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGAAGTGGACTC
TGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTGGTTCCGACA
AGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCTGCCGCTCGT
GCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCGCCTGGTTTC
CTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGCTGCAGCAGT
TCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAACTCGAGCTT
GCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAAGCGCGTCAA
GGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCCCTGGTGAGG
AGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATTGGCAACCGC
TATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCAGCCACTGAG
TGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:501742..503981-

>CAN33_0965-T1 ID=CAN33_0965-T1|Name=CAN33_0965-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6354bp|location=Sequence derived from alignment at NKJJ01000004.1:501742..503981- (Aspergillus niger FDAARGOS_311)
GTGGATCCCCAAACGCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCA
TTTCCGAGTGGTCGCCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCG
GACCCAACCACTTTGTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGT
GCAGCATCAGCGACCCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCG
TCGCAATGTGTATGATGATAAGGGCAAGGAGATCACACCTGCCACGGAGG
ACAAAGACAAGCAGACCAACGGCGAAGGCTCAACGAACGGTACGACGGGC
GATTCGACCAAGGCGATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTT
CAACTGCTTCTCTTGCGGCATCGATTGTACTCGCCTCAGATTCCACTATG
CCAAGGCAACACCCGCAACCGCCAACCCAGCCGCACCTGACACCAAGTAC
GACCTGTGCCCCAACTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAG
TGCCTCAGACTTCGTCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCG
ATCGGGATGCGCCATGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGA
TTGGAAAACTTTGACGACAACTGGGAACAAATTGCCACTCACGTTGGATC
CAGGACAAAGGAGGAGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAG
ACAAGTATCTGGATGACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAG
CCTATCAGCCAGGCCGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGC
ACAGATGGCTGAGCCTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGG
AGGAGATCCGCAAGGAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCT
CAAGACAAGGGCAAGGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGA
TTCCATGGAAGTGGACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCG
AGGTTGCTGGTTCCGACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTT
GCCGCTTCTGCCGCTCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGA
AATGACCCGCCTGGTTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCG
AGATTAAGCTGCAGCAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAA
CGCCGGGAACTCGAGCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGC
CTTTAAGAAGCGCGTCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTC
TTCGAGGCCCTGGTGAGGAGACCAACAACATGCTTGCCGATGCTGCTACG
ACTGGGATTGGCAACCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAG
AGGCGTGCAGCCACTGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGG
ACCTGTAAGATCGCAATCGCATCAGGGATCTCCCGAGAAAAAGACCGAGA
CTGTTTCGGATACTGATAATCCGCTAGATGCACCCGCTTCACCCAAGCCC
CAGAATGCCGATGGCGAACCCGAGGATGAAGAGATGGGCGGCACCGAGAC
GGAGACGAAGAAGGAGACCGATGGAGGCGAGGATCTCGCTGATGTTGCCG
CACAGTCCGGCGCTGAAGGTGCTACAGATGAACAGCCGGCGCAGGCCAAG
GCATCCATTGAGGCCTCTGCGCGCTCACATCTCGTTTCGCAAACCCACGC
CATCATCCTCCCCAGCTACTCTACCTGGTTCGACATGCACCTCATCCACC
CGATCGAGAAGAAGGCTCTGGCGGAGTTCTTCAACGGCAGAAACCGTAGC
AAGACCCCTGCAGTTTACAAGGATTACCGTGATTTCATGATCAACACCTA
CCGTTTGAACCCCATTGAGTACCTCACAGTCACTGCGTGCCGCCGCAACC
TTGCTGGTGACGTGTGTGCGATCATGCGTGTGCACTCCTTCCTGGAACAA
TGGGGTCTCATCAACTACCAGATGGAGGACAACCAGGTTATGTCTGGTGG
CGCCACTGAGGATGCTCAGGCTATTAACGTGGCACAGGATGCCCCAGGTG
ATGTGATTACCACTTCCGGTGGATCCCCAAACGCGTCCGTCCAACATCGG
CCCCCCTTTCACTGGCCATTTCCGAGTGGTCGCCGATACCCCCAGAGGCC
TCCAGCCATTCCAGCCCGGACCCAACCACTTTGTCAAGCCTGGAAAGCCT
CTGCCAGCTACGGATCGTGCAGCATCAGCGACCCCAGCTGCCAAGGCCGA
CCTGAACCTCGAGATTCGTCGCAATGTGTATGATGATAAGGGCAAGGAGA
TCACACCTGCCACGGAGGACAAAGACAAGCAGACCAACGGCGAAGGCTCA
ACGAACGGTACGACGGGCGATTCGACCAAGGCGATGGAGAGCGCTTCCAA
GGAGCCGAGAAAGAAGTTCAACTGCTTCTCTTGCGGCATCGATTGTACTC
GCCTCAGATTCCACTATGCCAAGGCAACACCCGCAACCGCCAACCCAGCC
GCACCTGACACCAAGTACGACCTGTGCCCCAACTGCTTCCTGCAGGGCCG
GATGCCCTCCAGCCACAGTGCCTCAGACTTCGTCAAGCTTGAAGACAGCC
CATACTCGATAGCCCCCGATCGGGATGCGCCATGGTCGGATTCGGAGCTT
GTTCTGCTGCTGGAGGGATTGGAAAACTTTGACGACAACTGGGAACAAAT
TGCCACTCACGTTGGATCCAGGACAAAGGAGGAGTGCGTGATGAAGTTCT
TGCAGCTGGAGATCGAAGACAAGTATCTGGATGACATGCCTGAAGTTCGG
GCAGGCAGTGGGCGGGAGCCTATCAGCCAGGCCGAGAACCCTGTCCTGTC
CGTTGTCGCTTTCCTTGCACAGATGGCTGAGCCTGCAGTGGCCGCGGCTG
CCGCCGGCCGTTCCGTGGAGGAGATCCGCAAGGAATTGAGAAAGCAGCTT
GAGAAGGGCTCTGGAGCTCAAGACAAGGGCAAGGAGAAGGAAGGCAGTGC
GACAGTCAAGGCTGAGGATTCCATGGAAGTGGACTCTGCTCGTGAGGAAG
CAACCGAGCAAGCCGTCGAGGTTGCTGGTTCCGACAAGGGCAAGGCTTCC
CTTCCCACCGTGGCTCTTGCCGCTTCTGCCGCTCGTGCTGGCGCCCTGGC
TTCTCACGAAGAACGTGAAATGACCCGCCTGGTTTCCTCGGCCGTCAATG
TTACCCTCCAGAAGTTCGAGATTAAGCTGCAGCAGTTCAATGAGATGGAG
GAGATCATCGAAGCCGAACGCCGGGAACTCGAGCTTGCTCGTCAGCAGCT
CTTCCTCGACCGCATGGCCTTTAAGAAGCGCGTCAAGGAGGTCCAGGACA
CCCTGCAGGCCGTCAGTCTTCGAGGCCCTGGTGAGGAGACCAACAACATG
CTTGCCGATGCTGCTACGACTGGGATTGGCAACCGCTATAACTTCCAACC
GGCAGGAGGTGACGTTAGAGGCGTGCAGCCACTGAGTGCAGAAGCAGGCG
CTGACTACAAGACGTTGGACCTGTAAGATCGCAATCGCATCAGGGATCTC
CCGAGAAAAAGACCGAGACTGTTTCGGATACTGATAATCCGCTAGATGCA
CCCGCTTCACCCAAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAAGA
GATGGGCGGCACCGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGAGG
ATCTCGCTGATGTTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATGAA
CAGCCGGCGCAGGCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACATCT
CGTTTCGCAAACCCACGCCATCATCCTCCCCAGCTACTCTACCTGGTTCG
ACATGCACCTCATCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCTTC
AACGGCAGAAACCGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGTGA
TTTCATGATCAACACCTACCGTTTGAACCCCATTGAGTACCTCACAGTCA
CTGCGTGCCGCCGCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTGTG
CACTCCTTCCTGGAACAATGGGGTCTCATCAACTACCAGATGGAGGACAA
CCAGGTTATGTCTGGTGGCGCCACTGAGGATGCTCAGGCTATTAACGTGG
CACAGGATGCCCCAGGTGATGTGATTACCACTTCCGGTGGATCCCCAAAC
GCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGTGGTCG
CCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACCACTTT
GTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCAGCGAC
CCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGTGTATG
ATGATAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACAAGCAG
ACCAACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACCAAGGC
GATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTTCTCTT
GCGGCATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAACACCC
GCAACCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGCCCCAA
CTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGACTTCG
TCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATGCGCCA
TGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAACTTTGA
CGACAACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAAGGAGG
AGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATCTGGAT
GACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGCCAGGC
CGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGCTGAGC
CTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCCGCAAG
GAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAGGGCAA
GGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGAAGTGG
ACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTGGTTCC
GACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCTGCCGC
TCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCGCCTGG
TTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGCTGCAG
CAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAACTCGA
GCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAAGCGCG
TCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCCCTGGT
GAGGAGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATTGGCAA
CCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCAGCCAC
TGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAAGATCGC
AATCGCATCAGGGATCTCCCGAGAAAAAGACCGAGACTGTTTCGGATACT
GATAATCCGCTAGATGCACCCGCTTCACCCAAGCCCCAGAATGCCGATGG
CGAACCCGAGGATGAAGAGATGGGCGGCACCGAGACGGAGACGAAGAAGG
AGACCGATGGAGGCGAGGATCTCGCTGATGTTGCCGCACAGTCCGGCGCT
GAAGGTGCTACAGATGAACAGCCGGCGCAGGCCAAGGCATCCATTGAGGC
CTCTGCGCGCTCACATCTCGTTTCGCAAACCCACGCCATCATCCTCCCCA
GCTACTCTACCTGGTTCGACATGCACCTCATCCACCCGATCGAGAAGAAG
GCTCTGGCGGAGTTCTTCAACGGCAGAAACCGTAGCAAGACCCCTGCAGT
TTACAAGGATTACCGTGATTTCATGATCAACACCTACCGTTTGAACCCCA
TTGAGTACCTCACAGTCACTGCGTGCCGCCGCAACCTTGCTGGTGACGTG
TGTGCGATCATGCGTGTGCACTCCTTCCTGGAACAATGGGGTCTCATCAA
CTACCAGATGGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATG
CTCAGGCTATTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACT
TCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0965CAN33_0965Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0965-T1CAN33_0965-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0965-T1.cdsCAN33_0965-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0965-T1.exon3CAN33_0965-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0965-T1.exon2CAN33_0965-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0965-T1.exon1CAN33_0965-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR041984
DBxrefInterPro:IPR017884
DBxrefInterPro:IPR032451
DBxrefInterPro:IPR007526
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR001005
DBxrefPFAM:PF16495
DBxrefPFAM:PF04433
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
ProductSWIRM domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:501742..503981 -
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