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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:442930..444150- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10080-T1 ID=CAN33_10080-T1|Name=CAN33_10080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1221bp|location=Sequence derived from alignment at NKJJ01000006.1:442930..444150- (Aspergillus niger FDAARGOS_311)
ATGCTCGGATTTCCAATGTTCAGCCCAGAGACACCTGACGCCTGGAAGAT
GAATACCCCCTACTTTCCTTTTGTTTCCTCGGGTGTCTTCTCTGCATCGA
TACCATCATCACCCACCAATATAGAAGCTGCGAGTACTTCACAGTCTGAA
ACAAGCTTTCTGGACAAGGAAAAGGTCTGAAGCTTCCTGTCCATGGTCAG
TCTTCGTCTGATGTGAGATAACAGATTGTTCGAGGACCACTTGACTACCT
TCTTAAATCACCTGGGAAGGATATTCGTCGCAAATTCATCCACGCATTCA
ACGAGTGGCTGCGCATCCCAGAAGAGAAATTGAATATCATTACAGAGATT
GTTGGATTGCTCCACACAGCTTCCCTACTGTATATTCCTTTTCATTTCCC
ACATGATCGAAGTTCTTAATGTCTCGGAAACTAGCTGATCTTTTGAAGAA
TCGATGACATTCAGGACAATTCCAAACTTCGACGCGGCCTCCCAGTGGCC
CACAGCATCTTCGGCATTGCCCAGACCATCAACTCTGCTAATTATGCGTA
CTTTTTGGCGCAGGAGCGGCTCCGCGAACTGAATCATCCCGAAGCGTACG
AAATATACACCGAAGAACTGCTCCGTCTGCACCGCGGTCAAGGTATGGAC
TTGTACTGGCGGGATTCTCTGACCTGTCCCACAGAGGAGGACTATATCGA
GATGATCGCAAATAAGACGGGTGGCCTTTTCCGACTGGCTATCAAGCTTA
TGCAGTTGGAAACTGAAACAAAAAGGCAAGTGTTACATATCTGTCACAAT
ACTGTAAAGCTCCTTGTCACACAGCAGACTGACTCTATGCAGCGATGTCA
TCGAGCTAGCAGATTTGTTGGGGGTGATCTTTCAGATTCGAGATGATTAC
CAAAATTTGCAGAGCGGACTATACACGAAGAACAAGGGATTCTGTGAGGA
TTTGACGGAGGGCAAATTTTCCTTCCTGATCATCCACAGTATCCACAGTA
ACCCGAATAATCATCATCTGCTGAATATATTGCGGCAACGGAGCGAAGAC
GATTCGGTGAAGAAGTATGCTGTGGAGTATATCGACTCGACAGGGAGTTT
CGAATATTGTCGGGAACGGCTCGCTTCCTTGTTGGAAGAGGCGGATCATA
TGGTCAAAGAGCTAGAGAGTCAGGTTGGACATTCGAAGGGGATCTACGAA
ATATTGAGCTTTTTGTCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:442930..444150- >CAN33_10080-T1 ID=CAN33_10080-T1|Name=CAN33_10080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4860bp|location=Sequence derived from alignment at NKJJ01000006.1:442930..444150- (Aspergillus niger FDAARGOS_311)
CGATGTCATCGAGCTAGCAGATTTGTTGGGGGTGATCTTTCAGATTCGAG
ATGATTACCAAAATTTGCAGAGCGGACTATACACGAAGAACAAGGGATTC
TGTGAGGATTTGACGGAGGGCAAATTTTCCTTCCTGATCATCCACAGTAT
CCACAGTAACCCGAATAATCATCATCTGCTGAATATATTGCGGCAACGGA
GCGAAGACGATTCGGTGAAGAAGTATGCTGTGGAGTATATCGACTCGACA
GGGAGTTTCGAATATTGTCGGGAACGGCTCGCTTCCTTGTTGGAAGAGGC
GGATCATATGGTCAAAGAGCTAGAGAGTCAGGTTGGACATTCGAAGGGGA
TCTACGAAATATTGAGCTTTTTGTCGTAAAGGAGGACTATATCGAGATGA
TCGCAAATAAGACGGGTGGCCTTTTCCGACTGGCTATCAAGCTTATGCAA
ATCGATGACATTCAGGACAATTCCAAACTTCGACGCGGCCTCCCAGTGGC
CCACAGCATCTTCGGCATTGCCCAGACCATCAACTCTGCTAATTATGCGT
ACTTTTTGGCGCAGGAGCGGCTCCGCGAACTGAATCATCCCGAAGCGTAC
GAAATATACACCGAAGAACTGCTCCGTCTGCACCGCGGTCAAGATTGTTC
GAGGACCACTTGACTACCTTCTTAAATCACCTGGGAAGGATATTCGTCGC
AAATTCATCCACGCATTCAACGAGTGGCTGCGCATCCCAGAAGAGAAATT
GAATATCATTACAGAGATTGTTGGATTGCTCCACACAGCTTCCCTACTAT
GCTCGGATTTCCAATGTTCAGCCCAGAGACACCTGACGCCTGGAAGATGA
ATACCCCCTACTTTCCTTTTGTTTCCTCGGGTGTCTTCTCTGCATCGATA
CCATCATCACCCACCAATATAGAAGCTGCGAGTACTTCACAGTCTGAAAC
AAGCTTTCTGGACAAGGAAAAGCGATGTCATCGAGCTAGCAGATTTGTTG
GGGGTGATCTTTCAGATTCGAGATGATTACCAAAATTTGCAGAGCGGACT
ATACACGAAGAACAAGGGATTCTGTGAGGATTTGACGGAGGGCAAATTTT
CCTTCCTGATCATCCACAGTATCCACAGTAACCCGAATAATCATCATCTG
CTGAATATATTGCGGCAACGGAGCGAAGACGATTCGGTGAAGAAGTATGC
TGTGGAGTATATCGACTCGACAGGGAGTTTCGAATATTGTCGGGAACGGC
TCGCTTCCTTGTTGGAAGAGGCGGATCATATGGTCAAAGAGCTAGAGAGT
CAGGTTGGACATTCGAAGGGGATCTACGAAATATTGAGCTTTTTGTCGTA
AAGGAGGACTATATCGAGATGATCGCAAATAAGACGGGTGGCCTTTTCCG
ACTGGCTATCAAGCTTATGCAAATCGATGACATTCAGGACAATTCCAAAC
TTCGACGCGGCCTCCCAGTGGCCCACAGCATCTTCGGCATTGCCCAGACC
ATCAACTCTGCTAATTATGCGTACTTTTTGGCGCAGGAGCGGCTCCGCGA
ACTGAATCATCCCGAAGCGTACGAAATATACACCGAAGAACTGCTCCGTC
TGCACCGCGGTCAAGATTGTTCGAGGACCACTTGACTACCTTCTTAAATC
ACCTGGGAAGGATATTCGTCGCAAATTCATCCACGCATTCAACGAGTGGC
TGCGCATCCCAGAAGAGAAATTGAATATCATTACAGAGATTGTTGGATTG
CTCCACACAGCTTCCCTACTATGCTCGGATTTCCAATGTTCAGCCCAGAG
ACACCTGACGCCTGGAAGATGAATACCCCCTACTTTCCTTTTGTTTCCTC
GGGTGTCTTCTCTGCATCGATACCATCATCACCCACCAATATAGAAGCTG
CGAGTACTTCACAGTCTGAAACAAGCTTTCTGGACAAGGAAAAGCGATGT
CATCGAGCTAGCAGATTTGTTGGGGGTGATCTTTCAGATTCGAGATGATT
ACCAAAATTTGCAGAGCGGACTATACACGAAGAACAAGGGATTCTGTGAG
GATTTGACGGAGGGCAAATTTTCCTTCCTGATCATCCACAGTATCCACAG
TAACCCGAATAATCATCATCTGCTGAATATATTGCGGCAACGGAGCGAAG
ACGATTCGGTGAAGAAGTATGCTGTGGAGTATATCGACTCGACAGGGAGT
TTCGAATATTGTCGGGAACGGCTCGCTTCCTTGTTGGAAGAGGCGGATCA
TATGGTCAAAGAGCTAGAGAGTCAGGTTGGACATTCGAAGGGGATCTACG
AAATATTGAGCTTTTTGTCGTAAAGGAGGACTATATCGAGATGATCGCAA
ATAAGACGGGTGGCCTTTTCCGACTGGCTATCAAGCTTATGCAAATCGAT
GACATTCAGGACAATTCCAAACTTCGACGCGGCCTCCCAGTGGCCCACAG
CATCTTCGGCATTGCCCAGACCATCAACTCTGCTAATTATGCGTACTTTT
TGGCGCAGGAGCGGCTCCGCGAACTGAATCATCCCGAAGCGTACGAAATA
TACACCGAAGAACTGCTCCGTCTGCACCGCGGTCAAGATTGTTCGAGGAC
CACTTGACTACCTTCTTAAATCACCTGGGAAGGATATTCGTCGCAAATTC
ATCCACGCATTCAACGAGTGGCTGCGCATCCCAGAAGAGAAATTGAATAT
CATTACAGAGATTGTTGGATTGCTCCACACAGCTTCCCTACTATGCTCGG
ATTTCCAATGTTCAGCCCAGAGACACCTGACGCCTGGAAGATGAATACCC
CCTACTTTCCTTTTGTTTCCTCGGGTGTCTTCTCTGCATCGATACCATCA
TCACCCACCAATATAGAAGCTGCGAGTACTTCACAGTCTGAAACAAGCTT
TCTGGACAAGGAAAAGCGATGTCATCGAGCTAGCAGATTTGTTGGGGGTG
ATCTTTCAGATTCGAGATGATTACCAAAATTTGCAGAGCGGACTATACAC
GAAGAACAAGGGATTCTGTGAGGATTTGACGGAGGGCAAATTTTCCTTCC
TGATCATCCACAGTATCCACAGTAACCCGAATAATCATCATCTGCTGAAT
ATATTGCGGCAACGGAGCGAAGACGATTCGGTGAAGAAGTATGCTGTGGA
GTATATCGACTCGACAGGGAGTTTCGAATATTGTCGGGAACGGCTCGCTT
CCTTGTTGGAAGAGGCGGATCATATGGTCAAAGAGCTAGAGAGTCAGGTT
GGACATTCGAAGGGGATCTACGAAATATTGAGCTTTTTGTCGTAAAGGAG
GACTATATCGAGATGATCGCAAATAAGACGGGTGGCCTTTTCCGACTGGC
TATCAAGCTTATGCAAATCGATGACATTCAGGACAATTCCAAACTTCGAC
GCGGCCTCCCAGTGGCCCACAGCATCTTCGGCATTGCCCAGACCATCAAC
TCTGCTAATTATGCGTACTTTTTGGCGCAGGAGCGGCTCCGCGAACTGAA
TCATCCCGAAGCGTACGAAATATACACCGAAGAACTGCTCCGTCTGCACC
GCGGTCAAGATTGTTCGAGGACCACTTGACTACCTTCTTAAATCACCTGG
GAAGGATATTCGTCGCAAATTCATCCACGCATTCAACGAGTGGCTGCGCA
TCCCAGAAGAGAAATTGAATATCATTACAGAGATTGTTGGATTGCTCCAC
ACAGCTTCCCTACTATGCTCGGATTTCCAATGTTCAGCCCAGAGACACCT
GACGCCTGGAAGATGAATACCCCCTACTTTCCTTTTGTTTCCTCGGGTGT
CTTCTCTGCATCGATACCATCATCACCCACCAATATAGAAGCTGCGAGTA
CTTCACAGTCTGAAACAAGCTTTCTGGACAAGGAAAAGCGATGTCATCGA
GCTAGCAGATTTGTTGGGGGTGATCTTTCAGATTCGAGATGATTACCAAA
ATTTGCAGAGCGGACTATACACGAAGAACAAGGGATTCTGTGAGGATTTG
ACGGAGGGCAAATTTTCCTTCCTGATCATCCACAGTATCCACAGTAACCC
GAATAATCATCATCTGCTGAATATATTGCGGCAACGGAGCGAAGACGATT
CGGTGAAGAAGTATGCTGTGGAGTATATCGACTCGACAGGGAGTTTCGAA
TATTGTCGGGAACGGCTCGCTTCCTTGTTGGAAGAGGCGGATCATATGGT
CAAAGAGCTAGAGAGTCAGGTTGGACATTCGAAGGGGATCTACGAAATAT
TGAGCTTTTTGTCGTAAAGGAGGACTATATCGAGATGATCGCAAATAAGA
CGGGTGGCCTTTTCCGACTGGCTATCAAGCTTATGCAAATCGATGACATT
CAGGACAATTCCAAACTTCGACGCGGCCTCCCAGTGGCCCACAGCATCTT
CGGCATTGCCCAGACCATCAACTCTGCTAATTATGCGTACTTTTTGGCGC
AGGAGCGGCTCCGCGAACTGAATCATCCCGAAGCGTACGAAATATACACC
GAAGAACTGCTCCGTCTGCACCGCGGTCAAGATTGTTCGAGGACCACTTG
ACTACCTTCTTAAATCACCTGGGAAGGATATTCGTCGCAAATTCATCCAC
GCATTCAACGAGTGGCTGCGCATCCCAGAAGAGAAATTGAATATCATTAC
AGAGATTGTTGGATTGCTCCACACAGCTTCCCTACTATGCTCGGATTTCC
AATGTTCAGCCCAGAGACACCTGACGCCTGGAAGATGAATACCCCCTACT
TTCCTTTTGTTTCCTCGGGTGTCTTCTCTGCATCGATACCATCATCACCC
ACCAATATAGAAGCTGCGAGTACTTCACAGTCTGAAACAAGCTTTCTGGA
CAAGGAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
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| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000061.2 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR033749 |
| DBxref | InterPro:IPR000092 |
| DBxref | InterPro:IPR008949 |
| DBxref | PFAM:PF00348 |
| Product | Polyprenyl synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| NKJJ01000006.1 | supercontig | NKJJ01000006.1:442930..444150 - |
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