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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:444894..446010- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10085-T1 ID=CAN33_10085-T1|Name=CAN33_10085-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1117bp|location=Sequence derived from alignment at NKJJ01000006.1:444894..446010- (Aspergillus niger FDAARGOS_311)
ATGGAGCCCCTCCAGCATCATCTTCCGCAAACTTCGCTGGCTTTTCTCGC
CTTACTGGCCGTCCCGATAACGGCGCTGGTATGGGATCGCATATTGAACC
CACTTCCGACAACAAAGCGGGCTTGGCTTGTTGGCAAGAAGCAACCATCT
CGGATCACTTCACTGGAGTGCCCCTACAGCTACATCCGCCAAATCTACGG
TAAACACCACTGGGCCCCATTTGTCGACAAGCTGGCGCCCAGCCTCAAGT
TGGAGGACCCGCCGAAGTACCAGCTGGTCCTTGAGATTATGGACGGCATC
CATCTCTGTTTGATACTGGTTGATGATGTAAGTGCAGCACCCCACTGAAC
ATATGGAGTAGAGAGCTAATAACCCCATAAGATCTCGGACGGGAGTAACT
TTCGCAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAGAGACT
GCGAACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACCGTCCA
CGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGAGATCC
TGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTGCCAGC
TTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATGGCGTC
GCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACTAGAGA
ATAAGTCCATGGATGCTACCATGACTACGGTGGCGTATGTGCAAAGACAT
CCGAGCATTGGGGATTATGGCTGATTGACGTCTACACAGGTGGTGCTCAC
AGCTGCAGAATGACTGCAAGAACGTTTATTCGACCGATTATGCGAAAGCC
AAAGGTGCACTGGCAGAAGACCTGCGCAACGGCGAGCTTTCCTTCCCCAT
AGTGGTGGCATTGGATGCTCCCGAGGGTCATCTGATAGCGCGCGCCTTGG
AATACGGCTCACCCCATAATATCCGTAATGCTCTACGAGTAATTCAAAGA
GAAGATGTGCGTAGCGCCTGCTTGTGGGATTTGAAGAAATCAAGTGCCTC
CGTACAGGATTGGCTGGAAGTTTGGGGTCGGAAGGAAAAAATGGATGTCA
AGAGTGTGAAGCCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:444894..446010- >CAN33_10085-T1 ID=CAN33_10085-T1|Name=CAN33_10085-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3024bp|location=Sequence derived from alignment at NKJJ01000006.1:444894..446010- (Aspergillus niger FDAARGOS_311)
GTGGTGCTCACAGCTGCAGAATGACTGCAAGAACGTTTATTCGACCGATT
ATGCGAAAGCCAAAGGTGCACTGGCAGAAGACCTGCGCAACGGCGAGCTT
TCCTTCCCCATAGTGGTGGCATTGGATGCTCCCGAGGGTCATCTGATAGC
GCGCGCCTTGGAATACGGCTCACCCCATAATATCCGTAATGCTCTACGAG
TAATTCAAAGAGAAGATGTGCGTAGCGCCTGCTTGTGGGATTTGAAGAAA
TCAAGTGCCTCCGTACAGGATTGGCTGGAAGTTTGGGGTCGGAAGGAAAA
AATGGATGTCAAGAGTGTGAAGCCGTAAATCTCGGACGGGAGTAACTTTC
GCAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAGAGACTGCG
AACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACCGTCCACGA
ATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGAGATCCTGG
AAGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTGCCAGCTTT
CCAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATGGCGTCGCT
GAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACTAGAGAATA
AGTCCATGGATGCTACCATGACTACGGTGGCATGGAGCCCCTCCAGCATC
ATCTTCCGCAAACTTCGCTGGCTTTTCTCGCCTTACTGGCCGTCCCGATA
ACGGCGCTGGTATGGGATCGCATATTGAACCCACTTCCGACAACAAAGCG
GGCTTGGCTTGTTGGCAAGAAGCAACCATCTCGGATCACTTCACTGGAGT
GCCCCTACAGCTACATCCGCCAAATCTACGGTAAACACCACTGGGCCCCA
TTTGTCGACAAGCTGGCGCCCAGCCTCAAGTTGGAGGACCCGCCGAAGTA
CCAGCTGGTCCTTGAGATTATGGACGGCATCCATCTCTGTTTGATACTGG
TTGATGATGTGGTGCTCACAGCTGCAGAATGACTGCAAGAACGTTTATTC
GACCGATTATGCGAAAGCCAAAGGTGCACTGGCAGAAGACCTGCGCAACG
GCGAGCTTTCCTTCCCCATAGTGGTGGCATTGGATGCTCCCGAGGGTCAT
CTGATAGCGCGCGCCTTGGAATACGGCTCACCCCATAATATCCGTAATGC
TCTACGAGTAATTCAAAGAGAAGATGTGCGTAGCGCCTGCTTGTGGGATT
TGAAGAAATCAAGTGCCTCCGTACAGGATTGGCTGGAAGTTTGGGGTCGG
AAGGAAAAAATGGATGTCAAGAGTGTGAAGCCGTAAATCTCGGACGGGAG
TAACTTTCGCAAGGGACATCCCGCCGCGCACAAGATATACGGCCCTTCAG
AGACTGCGAACCGTGCCTACTATCGCGTGACACAACTTTTAAACCGGACC
GTCCACGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGCCTGGAGGA
GATCCTGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGATGGTCTTG
CCAGCTTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATCGGCAAATG
GCGTCGCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAGCTGGTACT
AGAGAATAAGTCCATGGATGCTACCATGACTACGGTGGCATGGAGCCCCT
CCAGCATCATCTTCCGCAAACTTCGCTGGCTTTTCTCGCCTTACTGGCCG
TCCCGATAACGGCGCTGGTATGGGATCGCATATTGAACCCACTTCCGACA
ACAAAGCGGGCTTGGCTTGTTGGCAAGAAGCAACCATCTCGGATCACTTC
ACTGGAGTGCCCCTACAGCTACATCCGCCAAATCTACGGTAAACACCACT
GGGCCCCATTTGTCGACAAGCTGGCGCCCAGCCTCAAGTTGGAGGACCCG
CCGAAGTACCAGCTGGTCCTTGAGATTATGGACGGCATCCATCTCTGTTT
GATACTGGTTGATGATGTGGTGCTCACAGCTGCAGAATGACTGCAAGAAC
GTTTATTCGACCGATTATGCGAAAGCCAAAGGTGCACTGGCAGAAGACCT
GCGCAACGGCGAGCTTTCCTTCCCCATAGTGGTGGCATTGGATGCTCCCG
AGGGTCATCTGATAGCGCGCGCCTTGGAATACGGCTCACCCCATAATATC
CGTAATGCTCTACGAGTAATTCAAAGAGAAGATGTGCGTAGCGCCTGCTT
GTGGGATTTGAAGAAATCAAGTGCCTCCGTACAGGATTGGCTGGAAGTTT
GGGGTCGGAAGGAAAAAATGGATGTCAAGAGTGTGAAGCCGTAAATCTCG
GACGGGAGTAACTTTCGCAAGGGACATCCCGCCGCGCACAAGATATACGG
CCCTTCAGAGACTGCGAACCGTGCCTACTATCGCGTGACACAACTTTTAA
ACCGGACCGTCCACGAATTTCCTCGTCTTGCGCCCTTTCTGATGCAGTGC
CTGGAGGAGATCCTGGAAGGCCAAGATATGTCCCTTGTATGGCGAAGGGA
TGGTCTTGCCAGCTTTCCAGTGGGTCCAAAGGAACGGGATGCAGCATATC
GGCAAATGGCGTCGCTGAAAACGGGCGCATTGTTTCGTTTGCTCGGTCAG
CTGGTACTAGAGAATAAGTCCATGGATGCTACCATGACTACGGTGGCATG
GAGCCCCTCCAGCATCATCTTCCGCAAACTTCGCTGGCTTTTCTCGCCTT
ACTGGCCGTCCCGATAACGGCGCTGGTATGGGATCGCATATTGAACCCAC
TTCCGACAACAAAGCGGGCTTGGCTTGTTGGCAAGAAGCAACCATCTCGG
ATCACTTCACTGGAGTGCCCCTACAGCTACATCCGCCAAATCTACGGTAA
ACACCACTGGGCCCCATTTGTCGACAAGCTGGCGCCCAGCCTCAAGTTGG
AGGACCCGCCGAAGTACCAGCTGGTCCTTGAGATTATGGACGGCATCCAT
CTCTGTTTGATACTGGTTGATGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000061.2 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | Polyprenyl synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:444894..446010 - |
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