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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:455267..455931+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10100-T1 ID=CAN33_10100-T1|Name=CAN33_10100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=665bp|location=Sequence derived from alignment at NKJJ01000006.1:455267..455931+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCT
TATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCG
CTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCACAAG
CAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGA
CGGATACGAAGCCCGAAAGGGCAGAGGTAGATATTATTCCATTTGACCAG
AATCACATTCTCATCCCTTATGGCAGAATTCACCAACAATATCCTCTCAA
CGAAGGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTG
GACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAA
AGTCATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACA
GCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTGACTATTTTGGGCCTT
GGCTGGCCCGCTTGAGCTCCATGACTTTGCGTGAACTACCTATGCAAAGT
GACGTGATCTGGAAGCTAGTTGCTTACCAGTAGGGCGTACAAAGGCCCGT
CTGCATCGGTACCGGACTCCTGCTACGAGGAAGCTCCTCTTGCCACTCAG
GACGGCGGCACTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:455267..455931+ >CAN33_10100-T1 ID=CAN33_10100-T1|Name=CAN33_10100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1494bp|location=Sequence derived from alignment at NKJJ01000006.1:455267..455931+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCT
TATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCG
CTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCACAAG
CAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGA
CGGATACGAAGCCCGAAAGGGCAGAGAATTCACCAACAATATCCTCTCAA
CGAAGGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTG
GACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAA
AGTCATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACA
GCGATGGCTCTGTTGAGGCGTACAAAGGCCCGTCTGCATCGGTACCGGAC
TCCTGCTACGAGGAAGCTCCTCTTGCCACTCAGGACGGCGGCACTTGAAT
GCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCTTA
TCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCGCT
GCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCACAAGCA
ACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGACG
GATACGAAGCCCGAAAGGGCAGAGAATTCACCAACAATATCCTCTCAACG
AAGGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTGGA
CAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAAAG
TCATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACAGC
GATGGCTCTGTTGAGGCGTACAAAGGCCCGTCTGCATCGGTACCGGACTC
CTGCTACGAGGAAGCTCCTCTTGCCACTCAGGACGGCGGCACTTGAATGC
CTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCTTATC
GGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCGCTGC
TGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCACAAGCAAC
TTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGACGGA
TACGAAGCCCGAAAGGGCAGAGAATTCACCAACAATATCCTCTCAACGAA
GGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTGGACA
AACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAAAGTC
ATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACAGCGA
TGGCTCTGTTGAGGCGTACAAAGGCCCGTCTGCATCGGTACCGGACTCCT
GCTACGAGGAAGCTCCTCTTGCCACTCAGGACGGCGGCACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004525 | ribonuclease III activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000061.2 |
| DBxref | InterPro:IPR036389 |
| DBxref | InterPro:IPR000999 |
| DBxref | PFAM:PF00636 |
| Product | Ribonuclease III domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:455267..455931 + |
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