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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000006.1:465035..466555+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10115-T1 ID=CAN33_10115-T1|Name=CAN33_10115-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1521bp|location=Sequence derived from alignment at NKJJ01000006.1:465035..466555+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGCATTCCACAATTTCGCCTTTGGCGATCCATCATCTTGTGTGT
TGTTTGGTCTCTCCCTTGCTTCCACGTCCTGGCGATCGACCTCGATCTCC
AAAACCCTGGTGAGTTTCGCAGACCTTGATCAATACTTAGACCTCTGTTG
GAAGCTAACAGACACTTCTTGTCCCTTAGACAGCGTTAAGAGCGTCGCAA
GCGAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGC
GATGTTCCTGGAAACCTTCCAGATCCATACTATTGGTGGGAGGCGGGGGC
CTTCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGATACCACAT
ACAACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAATCGA
GATTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGC
GTTCTGGGCCTTCGCTGCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATC
CCCAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACG
AACAAGCGCAGCGATGGAATACGCAGAAGTGTGGAGGAGGGCTGAAGTGG
CAGATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGAA
CGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAACG
CGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGTA
GGACTGATTGGACCGGAGTATCATGTGTTCGATGGGACGAGTGAGGAGAA
CAACTGCACCGACCTCAATCATATTGAGTGGACTTACAATAACGGGGTGT
TCCTGCTCGGGGCAGCACACATGTGGAACTATGTAAGTATGAGACCTGGT
CACTCTGCTCTGTTATGCGACGTACAACTAATGAGAAAGCAGACCAACGG
AGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCA
GCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGCA
TGCGAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCTA
CCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACG
ATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAA
TGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGG
GACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAG
TCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACC
ACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGA
TTCATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAA
TCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGTC
ACGGCTTTCATGGTGTCGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000006.1:465035..466555+ >CAN33_10115-T1 ID=CAN33_10115-T1|Name=CAN33_10115-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5472bp|location=Sequence derived from alignment at NKJJ01000006.1:465035..466555+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGCATTCCACAATTTCGCCTTTGGCGATCCATCATCTTGTGTGT
TGTTTGGTCTCTCCCTTGCTTCCACGTCCTGGCGATCGACCTCGATCTCC
AAAACCCTGACAGCGTTAAGAGCGTCGCAAGCGAACTCGCCTGGGACCTA
GTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCCTGGAAACCTTCC
AGATCCATACTATTGGTGGGAGGCGGGGGCCTTCTTCGGCACCCTGGTCA
ATTACTGGGCCTACACCGGAGATACCACATACAACGACCTGACCGCGCAA
GCCATCCTCCACCAGGTCGGTCCCAATCGAGATTTCATGCCCGCCAACCA
GACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGGCCTTCGCTGCTC
TCCGCGCCGCCGAGCGAAACTTCCCCAATCCCCAGCCGACCAACCGTCGT
GGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGCGCAGCGATGGAAT
ACGCAGAAGTATCTATACTTTCAACAGCGGCTACACATACCGGAATTCGA
TCTCGAACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATATACG
GGCAACGCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGAC
GGACGTAGGACTGATTGGACCGGAGTATCATGTGTTCGATGGGACGAGTG
AGGAGAACAACTGCACCGACCTCAATCATATTGAGTGGACTTACAATAAC
GGGGTGTTCCTGCTCGGGGCAGCACACATGTGGAACTATACCAACGGAGA
TGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGCAGCT
TCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGCATGC
GAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCTACCT
GGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTACGATA
CCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCAATGT
GTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGGGGAC
CTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAAGTCG
TCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATACCACG
GGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAGATTC
ATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGAATCG
GCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGTCACG
GCTTTCATGGTGTCGTAAATGTCGCGCATTCCACAATTTCGCCTTTGGCG
ATCCATCATCTTGTGTGTTGTTTGGTCTCTCCCTTGCTTCCACGTCCTGG
CGATCGACCTCGATCTCCAAAACCCTGACAGCGTTAAGAGCGTCGCAAGC
GAACTCGCCTGGGACCTAGTCAGCTTCTATACGGGCAACAACACCGGCGA
TGTTCCTGGAAACCTTCCAGATCCATACTATTGGTGGGAGGCGGGGGCCT
TCTTCGGCACCCTGGTCAATTACTGGGCCTACACCGGAGATACCACATAC
AACGACCTGACCGCGCAAGCCATCCTCCACCAGGTCGGTCCCAATCGAGA
TTTCATGCCCGCCAACCAGACGCGCACGGAGGGAAACGATGACCAGGCGT
TCTGGGCCTTCGCTGCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATCCC
CAGCCGACCAACCGTCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAA
CAAGCGCAGCGATGGAATACGCAGAAGTATCTATACTTTCAACAGCGGCT
ACACATACCGGAATTCGATCTCGAACGGATGCTTCTTCAACATCGCGGCT
CGACTCGCGCGATATACGGGCAACGCGACGTATGCGGATTGGGCGAATAA
GGTCTGGGACTGGGTGACGGACGTAGGACTGATTGGACCGGAGTATCATG
TGTTCGATGGGACGAGTGAGGAGAACAACTGCACCGACCTCAATCATATT
GAGTGGACTTACAATAACGGGGTGTTCCTGCTCGGGGCAGCACACATGTG
GAACTATACCAACGGAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTC
TTCAGGCTCAGAGCAGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTG
CTTTACGAGGCCGCATGCGAGACCGTGGGGACCTGCCAAACGGACCAATT
CTCGTTCAAGGCCTACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGG
CTCCCTTCACCTACGATACCATTATGGCACGCCTGCAACCGACAGCCAAG
GCAGCAGCAGCCCAATGTGTGGGAGGTAAGACGGGTACATACTGTGGGAT
GCAATGGACCACGGGGACCTATGATGGTACAGTGGGCGTGGGACAGCAGA
TGGCCGCCTTGGAAGTCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGC
CCACTCACTCATACCACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGG
GACCCAGGCTTCAGATTCATCCCGAGATCCCAGTGAACTGCGCCCGATCA
CCACATCGGATCGAATCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGC
TTGGTGCTTGGGGTCACGGCTTTCATGGTGTCGTAAATGTCGCGCATTCC
ACAATTTCGCCTTTGGCGATCCATCATCTTGTGTGTTGTTTGGTCTCTCC
CTTGCTTCCACGTCCTGGCGATCGACCTCGATCTCCAAAACCCTGACAGC
GTTAAGAGCGTCGCAAGCGAACTCGCCTGGGACCTAGTCAGCTTCTATAC
GGGCAACAACACCGGCGATGTTCCTGGAAACCTTCCAGATCCATACTATT
GGTGGGAGGCGGGGGCCTTCTTCGGCACCCTGGTCAATTACTGGGCCTAC
ACCGGAGATACCACATACAACGACCTGACCGCGCAAGCCATCCTCCACCA
GGTCGGTCCCAATCGAGATTTCATGCCCGCCAACCAGACGCGCACGGAGG
GAAACGATGACCAGGCGTTCTGGGCCTTCGCTGCTCTCCGCGCCGCCGAG
CGAAACTTCCCCAATCCCCAGCCGACCAACCGTCGTGGCTATCTCTCGCG
CAGGCCGTGTTCAACGAACAAGCGCAGCGATGGAATACGCAGAAGTATCT
ATACTTTCAACAGCGGCTACACATACCGGAATTCGATCTCGAACGGATGC
TTCTTCAACATCGCGGCTCGACTCGCGCGATATACGGGCAACGCGACGTA
TGCGGATTGGGCGAATAAGGTCTGGGACTGGGTGACGGACGTAGGACTGA
TTGGACCGGAGTATCATGTGTTCGATGGGACGAGTGAGGAGAACAACTGC
ACCGACCTCAATCATATTGAGTGGACTTACAATAACGGGGTGTTCCTGCT
CGGGGCAGCACACATGTGGAACTATACCAACGGAGATGAGAACTGGCGCA
AACGGGTCAACGGCCTTCTTCAGGCTCAGAGCAGCTTCCTCTCCACGAAC
GAGAGCTCCAAGAACGTGCTTTACGAGGCCGCATGCGAGACCGTGGGGAC
CTGCCAAACGGACCAATTCTCGTTCAAGGCCTACCTGGTGCGGTGGATGG
CTGACACGGCCCGACTGGCTCCCTTCACCTACGATACCATTATGGCACGC
CTGCAACCGACAGCCAAGGCAGCAGCAGCCCAATGTGTGGGAGGTAAGAC
GGGTACATACTGTGGGATGCAATGGACCACGGGGACCTATGATGGTACAG
TGGGCGTGGGACAGCAGATGGCCGCCTTGGAAGTCGTCCAGGCCAATCTT
CTCCAGGCCAACCCCGGCCCACTCACTCATACCACGGGAGGATCCAGTCA
GGGGAACAGCGCCGCAGGGACCCAGGCTTCAGATTCATCCCGAGATCCCA
GTGAACTGCGCCCGATCACCACATCGGATCGAATCGGCGCAGGAGTAGTG
ACGGGAGTCACAGCATGCTTGGTGCTTGGGGTCACGGCTTTCATGGTGTC
GTAAATGTCGCGCATTCCACAATTTCGCCTTTGGCGATCCATCATCTTGT
GTGTTGTTTGGTCTCTCCCTTGCTTCCACGTCCTGGCGATCGACCTCGAT
CTCCAAAACCCTGACAGCGTTAAGAGCGTCGCAAGCGAACTCGCCTGGGA
CCTAGTCAGCTTCTATACGGGCAACAACACCGGCGATGTTCCTGGAAACC
TTCCAGATCCATACTATTGGTGGGAGGCGGGGGCCTTCTTCGGCACCCTG
GTCAATTACTGGGCCTACACCGGAGATACCACATACAACGACCTGACCGC
GCAAGCCATCCTCCACCAGGTCGGTCCCAATCGAGATTTCATGCCCGCCA
ACCAGACGCGCACGGAGGGAAACGATGACCAGGCGTTCTGGGCCTTCGCT
GCTCTCCGCGCCGCCGAGCGAAACTTCCCCAATCCCCAGCCGACCAACCG
TCGTGGCTATCTCTCGCGCAGGCCGTGTTCAACGAACAAGCGCAGCGATG
GAATACGCAGAAGTATCTATACTTTCAACAGCGGCTACACATACCGGAAT
TCGATCTCGAACGGATGCTTCTTCAACATCGCGGCTCGACTCGCGCGATA
TACGGGCAACGCGACGTATGCGGATTGGGCGAATAAGGTCTGGGACTGGG
TGACGGACGTAGGACTGATTGGACCGGAGTATCATGTGTTCGATGGGACG
AGTGAGGAGAACAACTGCACCGACCTCAATCATATTGAGTGGACTTACAA
TAACGGGGTGTTCCTGCTCGGGGCAGCACACATGTGGAACTATACCAACG
GAGATGAGAACTGGCGCAAACGGGTCAACGGCCTTCTTCAGGCTCAGAGC
AGCTTCCTCTCCACGAACGAGAGCTCCAAGAACGTGCTTTACGAGGCCGC
ATGCGAGACCGTGGGGACCTGCCAAACGGACCAATTCTCGTTCAAGGCCT
ACCTGGTGCGGTGGATGGCTGACACGGCCCGACTGGCTCCCTTCACCTAC
GATACCATTATGGCACGCCTGCAACCGACAGCCAAGGCAGCAGCAGCCCA
ATGTGTGGGAGGTAAGACGGGTACATACTGTGGGATGCAATGGACCACGG
GGACCTATGATGGTACAGTGGGCGTGGGACAGCAGATGGCCGCCTTGGAA
GTCGTCCAGGCCAATCTTCTCCAGGCCAACCCCGGCCCACTCACTCATAC
CACGGGAGGATCCAGTCAGGGGAACAGCGCCGCAGGGACCCAGGCTTCAG
ATTCATCCCGAGATCCCAGTGAACTGCGCCCGATCACCACATCGGATCGA
ATCGGCGCAGGAGTAGTGACGGGAGTCACAGCATGCTTGGTGCTTGGGGT
CACGGCTTTCATGGTGTCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008496 | mannan endo-1,6-alpha-mannosidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000061.3 |
| Note | SECRETED:SignalP(1-28) |
| Note | CAZy:GH76 |
| DBxref | InterPro:IPR008928 |
| DBxref | InterPro:IPR014480 |
| DBxref | InterPro:IPR005198 |
| DBxref | PFAM:PF03663 |
| Product | Glycosyl hydrolase family 76 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000006.1 | supercontig | NKJJ01000006.1:465035..466555 + |
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