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CAN33_10185-T1, CAN33_10185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10185-T1
Unique NameCAN33_10185-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:511317..512845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10185-T1 ID=CAN33_10185-T1|Name=CAN33_10185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1529bp|location=Sequence derived from alignment at NKJJ01000006.1:511317..512845+ (Aspergillus niger FDAARGOS_311)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGAT
GAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGA
TGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAG
GCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCAT
GGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGC
TATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCAT
GCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGC
ACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTC
GACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000006.1:511317..512845+

>CAN33_10185-T1 ID=CAN33_10185-T1|Name=CAN33_10185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2880bp|location=Sequence derived from alignment at NKJJ01000006.1:511317..512845+ (Aspergillus niger FDAARGOS_311)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAATCAATACGTCGACACGGTAGCCTGGCACTGT
TATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAA
CCCTGGGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGAT
CATGGCACCAGGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCG
TCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCA
TTTGACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACG
ATGATGACAGCTATACTCTTAATACTGCCTACTACATGATGGCACAGTTT
AGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTA
TACCTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTG
ATGGAACGCGCACAGTCATTATTGAGAATATATTCAGTAACGATATTTAC
TTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAG
TGAATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGAATGAGTTGGA
TGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTT
GAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATTCATCGGGTAC
CTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGG
GCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCAC
AAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCAC
GTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGT
TGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGC
GCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATGACAACGGAAA
CGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTG
CTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAG
GTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGT
GATTGATGGCAACGCGACTGATAACAACCTTAACGATGGCTACCTTACCA
GTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTC
GTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGGTCGATGCCAT
TACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATATCCCACCATGT
ATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCG
GCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAA
TACTGGCAATCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGG
ATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTC
AAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCA
GGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCA
TGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGT
GGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAG
CTATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCA
TGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCG
GGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCG
CACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGT
CGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTG
ACTACTTGGGTCCTTCCGGCCTTGTCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NEG1CAN33_10185Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10185-T1.exon1CAN33_10185-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_10185-T1.exon2CAN33_10185-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10185-T1.cdsCAN33_10185-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10185-T1CAN33_10185-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH30_7
NoteCAZy:GH30_2
NoteCAZy:GH30_1
NoteCAZy:GH30
NoteCAZy:GH30_3
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR033453
DBxrefInterPro:IPR033452
DBxrefPFAM:PF17189
DBxrefPFAM:PF02055
Product6-beta-D-glucanase neg1
ProductEndo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:511317..512845 +
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