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CAN33_10330-T1, CAN33_10330-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10330-T1
Unique NameCAN33_10330-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000006.1:572710..574057+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10330-T1 ID=CAN33_10330-T1|Name=CAN33_10330-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1348bp|location=Sequence derived from alignment at NKJJ01000006.1:572710..574057+ (Aspergillus niger FDAARGOS_311)
ATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGC
TGTCAGTGCCGCCGGTGTTGTTGGTGCCGCCGAGGGTTTCGCCCATGGTG
TCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAG
CTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAG
AACGTAGGTCGATCCTCAATTGGAAATGGATGGGTAGACGTGGGCCTAAC
AGGTTGATAATCCAGCTTCGACTTCACCGGCACTGAGGGTACTGAAACTA
CCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATC
AACCTGCACAGCTGGTGTGACAACTACCAGGCTAGCGCCCCCAAGGTATC
CGTGACTTAGTATGTTGTCCCCGTTCGATTGGTGACCCTGTCTTTCCATG
CTGATAGCCGTATAGTGATAAGGCGGGTATCCTCCCCATTACGGTCAACT
CCAACAAAAGTATCGTTGGTCAGGGCACCAAGGGAGTCATCAAGGGCAAG
GGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGTGAGTGCA
GAACATCGGTCTTAGGATGTGAAAAAACCCTTTGCTAATAAAGGCCAGGA
ACATTGCCGTTACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCC
ATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGC
TCGCATTGGTCGCCAGCACATCGTTCTGGGAACCAGCGCCGACAACCGCG
TCACCATCTCCTACTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACC
TGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACAT
GGTCACCCTTAAGGGCAACTACTTCTACAACCTGAGCGGCCGCATGCCCA
AGGTTCAGGGTAACACTCTGCTGCACGCCGTATGTCGCCTTGAGCCTCCT
ATATGATTTGCACATTACTGACAAGTCTGACTACAGGTGAACAACCTCTT
CCACAACTTTGACGGCCACGCCTTCGAAATCGGCACTGGTGGCTACGTCC
TGGCCGAGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGGAGACGCCC
ATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCAACACCAACCAGCAGTG
CGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCG
GCTCGATGTCCGGATCGGACACCAGCATCATCAGCAAGTTCGCTGGCAAG
ACCATTGCTGCGGCTCACCCCCGGGTAACATTGCCCAGTGGACCATGA
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Coding sequence (CDS) from alignment at NKJJ01000006.1:572710..574057+

>CAN33_10330-T1 ID=CAN33_10330-T1|Name=CAN33_10330-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5580bp|location=Sequence derived from alignment at NKJJ01000006.1:572710..574057+ (Aspergillus niger FDAARGOS_311)
ATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGC
TGTCAGTGCCGCCGGTGTTGTTGGTGCCGCCGAGGGTTTCGCCCATGGTG
TCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAG
CTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAG
AACCTTCGACTTCACCGGCACTGAGGGTACTGAAACTACCACCGGATGTG
CCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATCAACCTGCACAGC
TGGTGTGACAACTACCAGGCTAGCGCCCCCAAGGTATCCGTGACTTATGA
TAAGGCGGGTATCCTCCCCATTACGGTCAACTCCAACAAAAGTATCGTTG
GTCAGGGCACCAAGGGAGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGC
GGTGCCAAGAACGTCATCATCCAGAACATTGCCGTTACCGACATCAACCC
CAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGG
TCTGGATCGACCATGTGACCACTGCTCGCATTGGTCGCCAGCACATCGTT
CTGGGAACCAGCGCCGACAACCGCGTCACCATCTCCTACTCCCTCATCGA
TGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCG
TGTACCTGGACGGCAGCAACGACATGGTCACCCTTAAGGGCAACTACTTC
TACAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCA
CGCCGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGAAATCG
GCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAAC
ACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGACGC
CAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCA
ACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATC
AGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCGGGTAACATT
GCCCAGTGGACCATGAATGCATTACAAACTGCTTTTTGCTGCTGCCGCAG
CATCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGTTGTTGGTGCCGCCGAG
GGTTTCGCCCATGGTGTCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCC
TACGACTACTGATGAGCTGGTCTCTTACCTCGGAGATAACGAGCCCCGGG
TGATTATCCTGGATAGAACCTTCGACTTCACCGGCACTGAGGGTACTGAA
ACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGC
CATCAACCTGCACAGCTGGTGTGACAACTACCAGGCTAGCGCCCCCAAGG
TATCCGTGACTTATGATAAGGCGGGTATCCTCCCCATTACGGTCAACTCC
AACAAAAGTATCGTTGGTCAGGGCACCAAGGGAGTCATCAAGGGCAAGGG
TCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGAACATTGCCG
TTACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCATTACTGTC
GATGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGCTCGCATTGG
TCGCCAGCACATCGTTCTGGGAACCAGCGCCGACAACCGCGTCACCATCT
CCTACTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTGCAACGGC
CACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTCACCCT
TAAGGGCAACTACTTCTACAACCTGAGCGGCCGCATGCCCAAGGTTCAGG
GTAACACTCTGCTGCACGCCGTGAACAACCTCTTCCACAACTTTGACGGC
CACGCCTTCGAAATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGT
CTTCCAGGACGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCT
TCAGCTCCCCCGACGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGT
CGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATC
GGACACCAGCATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTC
ACCCCCGGGTAACATTGCCCAGTGGACCATGAATGCATTACAAACTGCTT
TTTGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGT
TGTTGGTGCCGCCGAGGGTTTCGCCCATGGTGTCACTGGCGGTGGCAGCG
CTTCCCCCGTCTATCCTACGACTACTGATGAGCTGGTCTCTTACCTCGGA
GATAACGAGCCCCGGGTGATTATCCTGGATAGAACCTTCGACTTCACCGG
CACTGAGGGTACTGAAACTACCACCGGATGTGCCCCCTGGGGAACTGCTT
CCCAATGCCAGGTGGCCATCAACCTGCACAGCTGGTGTGACAACTACCAG
GCTAGCGCCCCCAAGGTATCCGTGACTTATGATAAGGCGGGTATCCTCCC
CATTACGGTCAACTCCAACAAAAGTATCGTTGGTCAGGGCACCAAGGGAG
TCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATC
ATCCAGAACATTGCCGTTACCGACATCAACCCCAAGTATGTCTGGGGTGG
TGATGCCATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGA
CCACTGCTCGCATTGGTCGCCAGCACATCGTTCTGGGAACCAGCGCCGAC
AACCGCGTCACCATCTCCTACTCCCTCATCGATGGTCGCTCCGACTACTC
TGCCACCTGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCA
ACGACATGGTCACCCTTAAGGGCAACTACTTCTACAACCTGAGCGGCCGC
ATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCGTGAACAACCTCTT
CCACAACTTTGACGGCCACGCCTTCGAAATCGGCACTGGTGGCTACGTCC
TGGCCGAGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGGAGACGCCC
ATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCAACACCAACCAGCAGTG
CGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCG
GCTCGATGTCCGGATCGGACACCAGCATCATCAGCAAGTTCGCTGGCAAG
ACCATTGCTGCGGCTCACCCCCGGGTAACATTGCCCAGTGGACCATGAAT
GCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGCTG
TCAGTGCCGCCGGTGTTGTTGGTGCCGCCGAGGGTTTCGCCCATGGTGTC
ACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAGCT
GGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAGAA
CCTTCGACTTCACCGGCACTGAGGGTACTGAAACTACCACCGGATGTGCC
CCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATCAACCTGCACAGCTG
GTGTGACAACTACCAGGCTAGCGCCCCCAAGGTATCCGTGACTTATGATA
AGGCGGGTATCCTCCCCATTACGGTCAACTCCAACAAAAGTATCGTTGGT
CAGGGCACCAAGGGAGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGG
TGCCAAGAACGTCATCATCCAGAACATTGCCGTTACCGACATCAACCCCA
AGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTC
TGGATCGACCATGTGACCACTGCTCGCATTGGTCGCCAGCACATCGTTCT
GGGAACCAGCGCCGACAACCGCGTCACCATCTCCTACTCCCTCATCGATG
GTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTG
TACCTGGACGGCAGCAACGACATGGTCACCCTTAAGGGCAACTACTTCTA
CAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACG
CCGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGAAATCGGC
ACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAACAC
TGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCA
ACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAAC
GCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATCAG
CAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCGGGTAACATTGC
CCAGTGGACCATGAATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCA
TCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGTTGTTGGTGCCGCCGAGGG
TTTCGCCCATGGTGTCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTA
CGACTACTGATGAGCTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTG
ATTATCCTGGATAGAACCTTCGACTTCACCGGCACTGAGGGTACTGAAAC
TACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCA
TCAACCTGCACAGCTGGTGTGACAACTACCAGGCTAGCGCCCCCAAGGTA
TCCGTGACTTATGATAAGGCGGGTATCCTCCCCATTACGGTCAACTCCAA
CAAAAGTATCGTTGGTCAGGGCACCAAGGGAGTCATCAAGGGCAAGGGTC
TCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGAACATTGCCGTT
ACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGA
TGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGCTCGCATTGGTC
GCCAGCACATCGTTCTGGGAACCAGCGCCGACAACCGCGTCACCATCTCC
TACTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCA
CCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTCACCCTTA
AGGGCAACTACTTCTACAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGT
AACACTCTGCTGCACGCCGTGAACAACCTCTTCCACAACTTTGACGGCCA
CGCCTTCGAAATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCT
TCCAGGACGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTC
AGCTCCCCCGACGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCG
TTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGG
ACACCAGCATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCAC
CCCCGGGTAACATTGCCCAGTGGACCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_10330CAN33_10330Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10330-T1CAN33_10330-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10330-T1.exon1CAN33_10330-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_10330-T1.exon2CAN33_10330-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_10330-T1.exon3CAN33_10330-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_10330-T1.exon4CAN33_10330-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_10330-T1.exon5CAN33_10330-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10330-T1.cdsCAN33_10330-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:PL1
NoteCAZy:PL1_4
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR002022
DBxrefPFAM:PF00544
ProductPectate lyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000006.1supercontigNKJJ01000006.1:572710..574057 +
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