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CAN33_10460-T1, CAN33_10460-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10460-T1
Unique NameCAN33_10460-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:35955..37083+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10460-T1 ID=CAN33_10460-T1|Name=CAN33_10460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1129bp|location=Sequence derived from alignment at NKJJ01000009.1:35955..37083+ (Aspergillus niger FDAARGOS_311)
ATGCAGACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAGCTTGATAAC
CACTTTCCACCTGGCACAGAAGGCACCCCTCATACTTCAGCGTCAGTCTT
CCAGTGTGGAAACATTCGCACCCTCATCGGTACGAGGGATTGAGAACTAT
GGTGTAGTAGAGCAATTATTATTTTCATGCCTACAGTCGGGGGACGACAA
ATCTGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGATTTGGCGTGACTG
ATGAGAGAATACTTGGGTTGAGGGGCATGTATGAAGAAGCGGTCGCCGAG
AATCGATCCAGTCTTGAAGAATGCTTGCAAACATATGACCTTGCGCTTTC
CGAAAATCCCGTCAATTTGGTCCGTTCTTCCTGCCACTCAATAGACTCAA
TGCTAATATACAAGGAAGCCCGTACTCAAGCGTCGGATCGCGCTCCTACG
CTCGCTGTCCAGGCCTGCGGATGCCATTTCTAGTCTCATCAAACTCCTGG
ACGCTGTCCCAACAGATGCGGAGGCTTGGTGTGAACTTGCAGATCTCTAC
TACTCTCAGGGGATGAGCTCACAGGCAGCTTTCTGTCTTGAGGAGGCCTT
ATTAATTGTGCCAAATTCTTGGAATGTATGAACAAAGGATCATGGGAAGG
GCAGTGAGTGGAACGCTGATTCAATTTACCTTTAGATTCATGCGTTCCTC
GGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGGGGATTGCTC
CCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAGCATAGAACTCT
GCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTAGTAGGGTTCCCA
ATACTTCGCCTTGATGGATGTTAAAGACTGACGCTGAAGCAGGCAACGTC
GCTCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTGACCACCCAC
CGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAGCTGATCCTT
TTCGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTCTTCGGACCA
TCACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGAAGGAACTCC
TTCACCGGCTCGACAATTTTCCCTTATAG
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Coding sequence (CDS) from alignment at NKJJ01000009.1:35955..37083+

>CAN33_10460-T1 ID=CAN33_10460-T1|Name=CAN33_10460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4545bp|location=Sequence derived from alignment at NKJJ01000009.1:35955..37083+ (Aspergillus niger FDAARGOS_311)
ATGCAGACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAGCTTGATAAC
CACTTTCCACCTGGCACAGAAGGCACCCCTCATACTTCAGCGTCAGTCTT
CCAGTGTGGAAACATTCGCACCCTCATCGTCGGGGGACGACAAATCTGCG
CTACTTTGTACTGAGCAGCTAGCAGCTCGATTTGGCGTGACTGATGAGAG
AATACTTGGGTTGAGGGGCATGTATGAAGAAGCGGTCGCCGAGAATCGAT
CCAGTCTTGAAGAATGCTTGCAAACATATGACCTTGCGCTTTCCGAAAAT
CCCGTCAATTTGCCCGTACTCAAGCGTCGGATCGCGCTCCTACGCTCGCT
GTCCAGGCCTGCGGATGCCATTTCTAGTCTCATCAAACTCCTGGACGCTG
TCCCAACAGATGCGGAGGCTTGGTGTGAACTTGCAGATCTCTACTACTCT
CAGGGGATGAGCTCACAGGCAGCTTTCTGTCTTGAGGAGGCCTTATTAAT
TGTGCCAAATTCTTGGAATATTCATGCGTTCCTCGGCGAAATCTTGTATT
CGGGTGCCTGTGCTTCTGAAACAGGGGATTGCTCCCAGCTTTTGGAGGTG
TCGATACATCATTTCTCCCGCAGCATAGAACTCTGCACTGATTATTTGCG
GGGCTTCTACGGACTAGTCCTAGCAACGTCGCTCCTGGGGAGGAACAGAC
GTCTAAAGGATCGCTCTCGTGACCACCCACCGGTTCAAGCAAGCCTTCTT
ACTAACAGGCTCCTCGACGAGCTGATCCTTTTCGCAAGAAACAGACTCGA
TGAGATTGTGAGATCCCGGTCTTCGGACCATCACTCTTGGAAGGGTAACC
AAGGCGAGCTCATTGCGGCGAAGGAACTCCTTCACCGGCTCGACAATTTT
CCCTTATAGATGCAGACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAG
CTTGATAACCACTTTCCACCTGGCACAGAAGGCACCCCTCATACTTCAGC
GTCAGTCTTCCAGTGTGGAAACATTCGCACCCTCATCGTCGGGGGACGAC
AAATCTGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGATTTGGCGTGAC
TGATGAGAGAATACTTGGGTTGAGGGGCATGTATGAAGAAGCGGTCGCCG
AGAATCGATCCAGTCTTGAAGAATGCTTGCAAACATATGACCTTGCGCTT
TCCGAAAATCCCGTCAATTTGCCCGTACTCAAGCGTCGGATCGCGCTCCT
ACGCTCGCTGTCCAGGCCTGCGGATGCCATTTCTAGTCTCATCAAACTCC
TGGACGCTGTCCCAACAGATGCGGAGGCTTGGTGTGAACTTGCAGATCTC
TACTACTCTCAGGGGATGAGCTCACAGGCAGCTTTCTGTCTTGAGGAGGC
CTTATTAATTGTGCCAAATTCTTGGAATATTCATGCGTTCCTCGGCGAAA
TCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGGGGATTGCTCCCAGCTT
TTGGAGGTGTCGATACATCATTTCTCCCGCAGCATAGAACTCTGCACTGA
TTATTTGCGGGGCTTCTACGGACTAGTCCTAGCAACGTCGCTCCTGGGGA
GGAACAGACGTCTAAAGGATCGCTCTCGTGACCACCCACCGGTTCAAGCA
AGCCTTCTTACTAACAGGCTCCTCGACGAGCTGATCCTTTTCGCAAGAAA
CAGACTCGATGAGATTGTGAGATCCCGGTCTTCGGACCATCACTCTTGGA
AGGGTAACCAAGGCGAGCTCATTGCGGCGAAGGAACTCCTTCACCGGCTC
GACAATTTTCCCTTATAGATGCAGACGACTCCTGAGTCCCATGTCGCGAA
TGGTTCGAGCTTGATAACCACTTTCCACCTGGCACAGAAGGCACCCCTCA
TACTTCAGCGTCAGTCTTCCAGTGTGGAAACATTCGCACCCTCATCGTCG
GGGGACGACAAATCTGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGATT
TGGCGTGACTGATGAGAGAATACTTGGGTTGAGGGGCATGTATGAAGAAG
CGGTCGCCGAGAATCGATCCAGTCTTGAAGAATGCTTGCAAACATATGAC
CTTGCGCTTTCCGAAAATCCCGTCAATTTGCCCGTACTCAAGCGTCGGAT
CGCGCTCCTACGCTCGCTGTCCAGGCCTGCGGATGCCATTTCTAGTCTCA
TCAAACTCCTGGACGCTGTCCCAACAGATGCGGAGGCTTGGTGTGAACTT
GCAGATCTCTACTACTCTCAGGGGATGAGCTCACAGGCAGCTTTCTGTCT
TGAGGAGGCCTTATTAATTGTGCCAAATTCTTGGAATATTCATGCGTTCC
TCGGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGGGGATTGC
TCCCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAGCATAGAACT
CTGCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTAGCAACGTCGC
TCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTGACCACCCACCG
GTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAGCTGATCCTTTT
CGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTCTTCGGACCATC
ACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGAAGGAACTCCTT
CACCGGCTCGACAATTTTCCCTTATAGATGCAGACGACTCCTGAGTCCCA
TGTCGCGAATGGTTCGAGCTTGATAACCACTTTCCACCTGGCACAGAAGG
CACCCCTCATACTTCAGCGTCAGTCTTCCAGTGTGGAAACATTCGCACCC
TCATCGTCGGGGGACGACAAATCTGCGCTACTTTGTACTGAGCAGCTAGC
AGCTCGATTTGGCGTGACTGATGAGAGAATACTTGGGTTGAGGGGCATGT
ATGAAGAAGCGGTCGCCGAGAATCGATCCAGTCTTGAAGAATGCTTGCAA
ACATATGACCTTGCGCTTTCCGAAAATCCCGTCAATTTGCCCGTACTCAA
GCGTCGGATCGCGCTCCTACGCTCGCTGTCCAGGCCTGCGGATGCCATTT
CTAGTCTCATCAAACTCCTGGACGCTGTCCCAACAGATGCGGAGGCTTGG
TGTGAACTTGCAGATCTCTACTACTCTCAGGGGATGAGCTCACAGGCAGC
TTTCTGTCTTGAGGAGGCCTTATTAATTGTGCCAAATTCTTGGAATATTC
ATGCGTTCCTCGGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACA
GGGGATTGCTCCCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAG
CATAGAACTCTGCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTAG
CAACGTCGCTCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTGAC
CACCCACCGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAGCT
GATCCTTTTCGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTCTT
CGGACCATCACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGAAG
GAACTCCTTCACCGGCTCGACAATTTTCCCTTATAGATGCAGACGACTCC
TGAGTCCCATGTCGCGAATGGTTCGAGCTTGATAACCACTTTCCACCTGG
CACAGAAGGCACCCCTCATACTTCAGCGTCAGTCTTCCAGTGTGGAAACA
TTCGCACCCTCATCGTCGGGGGACGACAAATCTGCGCTACTTTGTACTGA
GCAGCTAGCAGCTCGATTTGGCGTGACTGATGAGAGAATACTTGGGTTGA
GGGGCATGTATGAAGAAGCGGTCGCCGAGAATCGATCCAGTCTTGAAGAA
TGCTTGCAAACATATGACCTTGCGCTTTCCGAAAATCCCGTCAATTTGCC
CGTACTCAAGCGTCGGATCGCGCTCCTACGCTCGCTGTCCAGGCCTGCGG
ATGCCATTTCTAGTCTCATCAAACTCCTGGACGCTGTCCCAACAGATGCG
GAGGCTTGGTGTGAACTTGCAGATCTCTACTACTCTCAGGGGATGAGCTC
ACAGGCAGCTTTCTGTCTTGAGGAGGCCTTATTAATTGTGCCAAATTCTT
GGAATATTCATGCGTTCCTCGGCGAAATCTTGTATTCGGGTGCCTGTGCT
TCTGAAACAGGGGATTGCTCCCAGCTTTTGGAGGTGTCGATACATCATTT
CTCCCGCAGCATAGAACTCTGCACTGATTATTTGCGGGGCTTCTACGGAC
TAGTCCTAGCAACGTCGCTCCTGGGGAGGAACAGACGTCTAAAGGATCGC
TCTCGTGACCACCCACCGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCT
CGACGAGCTGATCCTTTTCGCAAGAAACAGACTCGATGAGATTGTGAGAT
CCCGGTCTTCGGACCATCACTCTTGGAAGGGTAACCAAGGCGAGCTCATT
GCGGCGAAGGAACTCCTTCACCGGCTCGACAATTTTCCCTTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_10460CAN33_10460Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10460-T1CAN33_10460-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10460-T1.exon1CAN33_10460-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_10460-T1.exon2CAN33_10460-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_10460-T1.exon3CAN33_10460-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_10460-T1.exon4CAN33_10460-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_10460-T1.exon5CAN33_10460-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10460-T1.cdsCAN33_10460-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09263R62
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR013105
DBxrefInterPro:IPR019734
DBxrefPFAM:PF07719
ProductTPR repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:35955..37083 +
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