You are here

Home

CAN33_10635-T1, CAN33_10635-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10635-T1
Unique NameCAN33_10635-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:173069..174407-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10635-T1 ID=CAN33_10635-T1|Name=CAN33_10635-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1339bp|location=Sequence derived from alignment at NKJJ01000009.1:173069..174407- (Aspergillus niger FDAARGOS_311)
ATGCCTTTGATCAGCACCACAGAAGTCAACGAGGACACTCGCGGTCAGTA
TATAATACCCAATTCAAATGCCCGATGAGCCTATACTGATCTGTTATTCC
AATTAGTCCTGGGATATGATCCCCTCCTTCCCCCTCAGTACCTCCAGAAT
GAGATCCCTGGTGTGAGTCATACCGTCCCCCATTCTTTTTTTCCCTCTGT
CATTTTTCTCAAGCTTTTCCCTTTCATGTGCTGGTTGGCGGCTTAATCCG
ATCATTTTCTGAGTTACTTTCATCGTCAATGCCGAGGGTTCAGACCATTG
GTGCTAACAGAATGCGTAAATAGAAAAAGGAATCCCTCGAGGCCGTCCGT
TCTGGCCGCAATCAGGCCATGAAGATCATCGAGAAGCGCGATGACCGTCT
GCTGGTTGTTGTCGGTCCTTGCTCGATCCACGACCCTGCCACGGCCCTCG
AATATGCCCAGCGTCTGAAGGAGCTCTCCGAGAAGCTTTCCGACGACCTC
TGTGTTATTATGCGTGCCTACCTCGAGAAGCCCCGCACCACAGTGGGGTG
GAAGGGTCTGATCAACGACCCCGACATTGATGAGTCCTACAACATCAACA
AAGGTCTCCGTGTGTCACGTCAGCTCTACGCTGATCTTACCAGCATGGGC
ATGCCCATTGCCAGTGAGATGCTGGATACCATCTCCCCTCAGTACTTGGC
CGATCTGATCTCTCTCGGTGCCATTGGTGCCCGTACCACCGAGTCGCAAT
TGCACCGTGAGCTCGCCTCCGGTCTCAGTTTCCCCATTGGCTTCAAGAAC
GGTACCGACGGCAACCTCACCGTTGCCATTGATGCCATTGGTGCCGCTGC
TCACCCCCACCGCTTCCTGGGTGTCACCAAGCAAGGTCTGGCTGCCATTA
CCAAGACCGCTGGTAATGAGCACGGCTTCGTCATCCTCCGTGGAGGTAAC
AAGGGCACCAACTACGACCGTGAGAGCATCAAGGCCGCCCGCGAGGCCCT
GGCGGGCAAGAAGCAGCCCGAGGTCGTCATGGTCGACTGCTCGCACGGCA
ACTCCAACAAGAACCACCGCAACCAGCCTCTGGTCGCCAAGGAGGTCTCT
GACCAGCTCCGTGAGGGCCAGGATGCCATCATTGGTGTCATGATTGAGTC
CAACATCAACGAGGGTAACCAGAAGGTTCCCCCGAGGGTCCTTCCGGCCT
GCGCAAGGGTGTCAGCATCACTGACGCCTGCATTGACTGGGAGACCACCG
TCCAGGTCCTGGAGGACCTCGCTGATGGTGTTCGTGCCAGACGCGCCGCC
AAAGCCGCTCAAGCCAAGGCCAGCAATGGCACTCACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:173069..174407-

>CAN33_10635-T1 ID=CAN33_10635-T1|Name=CAN33_10635-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4188bp|location=Sequence derived from alignment at NKJJ01000009.1:173069..174407- (Aspergillus niger FDAARGOS_311)
ACCACCGTCCAGGTCCTGGAGGACCTCGCTGATGGTGTTCGTGCCAGACG
CGCCGCCAAAGCCGCTCAAGCCAAGGCCAGCAATGGCACTCACTGAAAAA
AGGAATCCCTCGAGGCCGTCCGTTCTGGCCGCAATCAGGCCATGAAGATC
ATCGAGAAGCGCGATGACCGTCTGCTGGTTGTTGTCGGTCCTTGCTCGAT
CCACGACCCTGCCACGGCCCTCGAATATGCCCAGCGTCTGAAGGAGCTCT
CCGAGAAGCTTTCCGACGACCTCTGTGTTATTATGCGTGCCTACCTCGAG
AAGCCCCGCACCACAGTGGGGTGGAAGGGTCTGATCAACGACCCCGACAT
TGATGAGTCCTACAACATCAACAAAGGTCTCCGTGTGTCACGTCAGCTCT
ACGCTGATCTTACCAGCATGGGCATGCCCATTGCCAGTGAGATGCTGGAT
ACCATCTCCCCTCAGTACTTGGCCGATCTGATCTCTCTCGGTGCCATTGG
TGCCCGTACCACCGAGTCGCAATTGCACCGTGAGCTCGCCTCCGGTCTCA
GTTTCCCCATTGGCTTCAAGAACGGTACCGACGGCAACCTCACCGTTGCC
ATTGATGCCATTGGTGCCGCTGCTCACCCCCACCGCTTCCTGGGTGTCAC
CAAGCAAGGTCTGGCTGCCATTACCAAGACCGCTGGTAATGAGCACGGCT
TCGTCATCCTCCGTGGAGGTAACAAGGGCACCAACTACGACCGTGAGAGC
ATCAAGGCCGCCCGCGAGGCCCTGGCGGGCAAGAAGCAGCCCGAGGTCGT
CATGGTCGACTGCTCGCACGGCAACTCCAACAAGAACCACCGCAACCAGC
CTCTGGTCGCCAAGGAGGTCTCTGACCAGCTCCGTGAGGGCCAGGATGCC
ATCATTGGTGTCATGATTGAGTCCAACATCAACGAGGGTAACCAGAAGTC
CTGGGATATGATCCCCTCCTTCCCCCTCAGTACCTCCAGAATGAGATCCC
TGGTATGCCTTTGATCAGCACCACAGAAGTCAACGAGGACACTCGCGACC
ACCGTCCAGGTCCTGGAGGACCTCGCTGATGGTGTTCGTGCCAGACGCGC
CGCCAAAGCCGCTCAAGCCAAGGCCAGCAATGGCACTCACTGAAAAAAGG
AATCCCTCGAGGCCGTCCGTTCTGGCCGCAATCAGGCCATGAAGATCATC
GAGAAGCGCGATGACCGTCTGCTGGTTGTTGTCGGTCCTTGCTCGATCCA
CGACCCTGCCACGGCCCTCGAATATGCCCAGCGTCTGAAGGAGCTCTCCG
AGAAGCTTTCCGACGACCTCTGTGTTATTATGCGTGCCTACCTCGAGAAG
CCCCGCACCACAGTGGGGTGGAAGGGTCTGATCAACGACCCCGACATTGA
TGAGTCCTACAACATCAACAAAGGTCTCCGTGTGTCACGTCAGCTCTACG
CTGATCTTACCAGCATGGGCATGCCCATTGCCAGTGAGATGCTGGATACC
ATCTCCCCTCAGTACTTGGCCGATCTGATCTCTCTCGGTGCCATTGGTGC
CCGTACCACCGAGTCGCAATTGCACCGTGAGCTCGCCTCCGGTCTCAGTT
TCCCCATTGGCTTCAAGAACGGTACCGACGGCAACCTCACCGTTGCCATT
GATGCCATTGGTGCCGCTGCTCACCCCCACCGCTTCCTGGGTGTCACCAA
GCAAGGTCTGGCTGCCATTACCAAGACCGCTGGTAATGAGCACGGCTTCG
TCATCCTCCGTGGAGGTAACAAGGGCACCAACTACGACCGTGAGAGCATC
AAGGCCGCCCGCGAGGCCCTGGCGGGCAAGAAGCAGCCCGAGGTCGTCAT
GGTCGACTGCTCGCACGGCAACTCCAACAAGAACCACCGCAACCAGCCTC
TGGTCGCCAAGGAGGTCTCTGACCAGCTCCGTGAGGGCCAGGATGCCATC
ATTGGTGTCATGATTGAGTCCAACATCAACGAGGGTAACCAGAAGTCCTG
GGATATGATCCCCTCCTTCCCCCTCAGTACCTCCAGAATGAGATCCCTGG
TATGCCTTTGATCAGCACCACAGAAGTCAACGAGGACACTCGCGACCACC
GTCCAGGTCCTGGAGGACCTCGCTGATGGTGTTCGTGCCAGACGCGCCGC
CAAAGCCGCTCAAGCCAAGGCCAGCAATGGCACTCACTGAAAAAAGGAAT
CCCTCGAGGCCGTCCGTTCTGGCCGCAATCAGGCCATGAAGATCATCGAG
AAGCGCGATGACCGTCTGCTGGTTGTTGTCGGTCCTTGCTCGATCCACGA
CCCTGCCACGGCCCTCGAATATGCCCAGCGTCTGAAGGAGCTCTCCGAGA
AGCTTTCCGACGACCTCTGTGTTATTATGCGTGCCTACCTCGAGAAGCCC
CGCACCACAGTGGGGTGGAAGGGTCTGATCAACGACCCCGACATTGATGA
GTCCTACAACATCAACAAAGGTCTCCGTGTGTCACGTCAGCTCTACGCTG
ATCTTACCAGCATGGGCATGCCCATTGCCAGTGAGATGCTGGATACCATC
TCCCCTCAGTACTTGGCCGATCTGATCTCTCTCGGTGCCATTGGTGCCCG
TACCACCGAGTCGCAATTGCACCGTGAGCTCGCCTCCGGTCTCAGTTTCC
CCATTGGCTTCAAGAACGGTACCGACGGCAACCTCACCGTTGCCATTGAT
GCCATTGGTGCCGCTGCTCACCCCCACCGCTTCCTGGGTGTCACCAAGCA
AGGTCTGGCTGCCATTACCAAGACCGCTGGTAATGAGCACGGCTTCGTCA
TCCTCCGTGGAGGTAACAAGGGCACCAACTACGACCGTGAGAGCATCAAG
GCCGCCCGCGAGGCCCTGGCGGGCAAGAAGCAGCCCGAGGTCGTCATGGT
CGACTGCTCGCACGGCAACTCCAACAAGAACCACCGCAACCAGCCTCTGG
TCGCCAAGGAGGTCTCTGACCAGCTCCGTGAGGGCCAGGATGCCATCATT
GGTGTCATGATTGAGTCCAACATCAACGAGGGTAACCAGAAGTCCTGGGA
TATGATCCCCTCCTTCCCCCTCAGTACCTCCAGAATGAGATCCCTGGTAT
GCCTTTGATCAGCACCACAGAAGTCAACGAGGACACTCGCGACCACCGTC
CAGGTCCTGGAGGACCTCGCTGATGGTGTTCGTGCCAGACGCGCCGCCAA
AGCCGCTCAAGCCAAGGCCAGCAATGGCACTCACTGAAAAAAGGAATCCC
TCGAGGCCGTCCGTTCTGGCCGCAATCAGGCCATGAAGATCATCGAGAAG
CGCGATGACCGTCTGCTGGTTGTTGTCGGTCCTTGCTCGATCCACGACCC
TGCCACGGCCCTCGAATATGCCCAGCGTCTGAAGGAGCTCTCCGAGAAGC
TTTCCGACGACCTCTGTGTTATTATGCGTGCCTACCTCGAGAAGCCCCGC
ACCACAGTGGGGTGGAAGGGTCTGATCAACGACCCCGACATTGATGAGTC
CTACAACATCAACAAAGGTCTCCGTGTGTCACGTCAGCTCTACGCTGATC
TTACCAGCATGGGCATGCCCATTGCCAGTGAGATGCTGGATACCATCTCC
CCTCAGTACTTGGCCGATCTGATCTCTCTCGGTGCCATTGGTGCCCGTAC
CACCGAGTCGCAATTGCACCGTGAGCTCGCCTCCGGTCTCAGTTTCCCCA
TTGGCTTCAAGAACGGTACCGACGGCAACCTCACCGTTGCCATTGATGCC
ATTGGTGCCGCTGCTCACCCCCACCGCTTCCTGGGTGTCACCAAGCAAGG
TCTGGCTGCCATTACCAAGACCGCTGGTAATGAGCACGGCTTCGTCATCC
TCCGTGGAGGTAACAAGGGCACCAACTACGACCGTGAGAGCATCAAGGCC
GCCCGCGAGGCCCTGGCGGGCAAGAAGCAGCCCGAGGTCGTCATGGTCGA
CTGCTCGCACGGCAACTCCAACAAGAACCACCGCAACCAGCCTCTGGTCG
CCAAGGAGGTCTCTGACCAGCTCCGTGAGGGCCAGGATGCCATCATTGGT
GTCATGATTGAGTCCAACATCAACGAGGGTAACCAGAAGTCCTGGGATAT
GATCCCCTCCTTCCCCCTCAGTACCTCCAGAATGAGATCCCTGGTATGCC
TTTGATCAGCACCACAGAAGTCAACGAGGACACTCGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009073aromatic amino acid family biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038493-deoxy-7-phosphoheptulonate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_10635CAN33_10635Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10635-T1CAN33_10635-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10635-T1.cdsCAN33_10635-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10635-T1.exon4CAN33_10635-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_10635-T1.exon3CAN33_10635-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_10635-T1.exon2CAN33_10635-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_10635-T1.exon1CAN33_10635-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR006218
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR006219
DBxrefPFAM:PF00793
Product3-deoxy-7-phosphoheptulonate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:173069..174407 -
Powered by Drupal