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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:229961..230589+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10750-T1 ID=CAN33_10750-T1|Name=CAN33_10750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=629bp|location=Sequence derived from alignment at NKJJ01000009.1:229961..230589+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCACAACTTCTTCCTCTTGGTAATTGACCCTGTCAGAAGCCGCG
TATACATGGCGATCGTTTGATTGATTGTTTATTAACATGCACGACAGAAC
TGATCGACAAGTGTGTCGGATCCAGGATATGGGTCATCATGAAGAATGAC
AAAGGTCGGCATGAACATCTCCCTGCGGGGGAGGGGTAGACGATAAGCTA
GCTAGCTAACATGCATTCAGAATTCGCTGGAACGCTGCTTGGATTCGATG
ACTACGTTAGTAAGTATATTTCCTATCGTCGGTTTACGGTGTATGAGATA
GAGCGTGAACTGACCTGCTACAGACATGGTCTTGGAGGACGTGACTGAGT
TGTAAGTCCCTATATCTGCTGTCTGGATTGAGCTTCCTATCTCTGGAGCT
CTTCTTTCTTAGCTGTTGTTCTCTGTGTGTGAAGTAAAGACATTACTAAA
CATGCGACAGCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTG
TTGAATGGAAACAACGTCTGCATGGTATGCCTCCAGCCGCGCCCTTTCTG
TTACTGATTATGCTCCATACTAACACTTTCAATTATCAAGTTGATCCCCG
GTGGTGAGGGACCCGTCGGTAGCTCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:229961..230589+ >CAN33_10750-T1 ID=CAN33_10750-T1|Name=CAN33_10750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1512bp|location=Sequence derived from alignment at NKJJ01000009.1:229961..230589+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGTGTGTCGGATC
CAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCTGGAACGCTGC
TTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGTGACTGAGTTC
GATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGTTGAATGGAAA
CAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTCGGTAGCTCTT
AGATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGTGTGTCGGA
TCCAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCTGGAACGCT
GCTTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGTGACTGAGT
TCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGTTGAATGGA
AACAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTCGGTAGCTC
TTAGATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGTGTGTCG
GATCCAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCTGGAACG
CTGCTTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGTGACTGA
GTTCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGTTGAATG
GAAACAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTCGGTAGC
TCTTAGATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGTGTGT
CGGATCCAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCTGGAA
CGCTGCTTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGTGACT
GAGTTCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGTTGAA
TGGAAACAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTCGGTA
GCTCTTAGATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGTGT
GTCGGATCCAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCTGG
AACGCTGCTTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGTGA
CTGAGTTCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGTTG
AATGGAAACAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTCGG
TAGCTCTTAGATGGCGTCACAACTTCTTCCTCTTGAACTGATCGACAAGT
GTGTCGGATCCAGGATATGGGTCATCATGAAGAATGACAAAGAATTCGCT
GGAACGCTGCTTGGATTCGATGACTACGTTAACATGGTCTTGGAGGACGT
GACTGAGTTCGATTACTCCGGCTCTCAAGTGAAGCTCCCCAAGATTCTGT
TGAATGGAAACAACGTCTGCATGTTGATCCCCGGTGGTGAGGGACCCGTC
GGTAGCTCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR033871 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | RNA-binding protein lsm5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:229961..230589 + |
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