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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:258211..259265+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10790-T1 ID=CAN33_10790-T1|Name=CAN33_10790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1055bp|location=Sequence derived from alignment at NKJJ01000009.1:258211..259265+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGTAAGGCGAGCAGACACAAGCAAATGAACTC
ACAGTCATCCCCAAGGCCAGTCTAACATGATCTTCTTTTTAGGCCATCGC
TCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCG
GATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAG
ATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCT
CGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCA
AAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGA
GTGTGCAAGTTCGAGGAGTTTCTCGAGTAAGTGGTCAACCCACCCCTTAA
TAACTTTCCTTTTGTTTGTCTACCGTCTGGAAGAGCCATTTCTAACTGCC
TTATGTTGGCCTACTGTGTAGAGTCGACCCCCCTCTCCTCGGCCACACAA
TCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGG
CAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAG
TTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCA
CCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGC
AAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCA
GCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGG
GCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCG
GCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGTAAGTTTTCT
TCTCTCAGCTTTATGTTGGATGTTCTGGAAGAGGCTGCTAATGTGAATCA
ATAGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTTC
AGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:258211..259265+ >CAN33_10790-T1 ID=CAN33_10790-T1|Name=CAN33_10790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3288bp|location=Sequence derived from alignment at NKJJ01000009.1:258211..259265+ (Aspergillus niger FDAARGOS_311)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCG
CAAAAGTAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATC
GAAGCGATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAG
TGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGC
CCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGA
CTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCT
CGAAGTCGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTG
GCGCATTCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAA
TCGCCACCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGT
TGGGGGTGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTA
GTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGT
AATGCGCTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATAT
GAGTGATCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGAC
GGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGT
GAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGATACTTGTGGATGGGGG
GCTTTTCGTGAATCTTCAGTAAATGCCTCTCCCCCAAATCCTAGTCGGCA
AAGTCGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCT
CTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGG
ATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGA
TTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTC
GTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAA
AGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAG
TGTGCAAGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCAC
ACAATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGC
ACGGCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGA
TTAGTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACG
CCCACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATT
GGGCAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGA
CTCAGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATG
GAGGGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGG
GCCGGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGG
CGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTAAATGCCT
CTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGGTTTAAC
CGGTATTGGCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCGCAAAAG
TAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATCGAAGCG
ATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAGTGAGCA
GAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGCCCGAGA
CGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGACTCGAT
GTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCTCGAAGT
CGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTGGCGCAT
TCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAATCGCCA
CCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGTTGGGGG
TGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTAGTCTTA
TGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGTAATGCG
CTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATATGAGTGA
TCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGACGGTTGG
GTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGTGAGGAG
TTGAGTGGTTATGTGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTT
CGTGAATCTTCAGTAAATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCG
CCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCTCTCGAA
TACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGGATCCAA
AGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGATTATCG
GGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCA
GGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGT
GGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCA
AGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCACACAATC
AACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGGCA
AATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAGTT
CTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCACC
AAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAA
ATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCAGC
TGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGGGC
AGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGC
GGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGA
TACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | L-rhamnose-1-dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:258211..259265 + |
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