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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:278637..279387+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_10825-T1 ID=CAN33_10825-T1|Name=CAN33_10825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=751bp|location=Sequence derived from alignment at NKJJ01000009.1:278637..279387+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTACCGACTCCAAGCCCAAGCCGGAGAGACTGTAAGTCGAATC
CACCCCCCATTTGCGTGGGGAAAGATTATCATCTATCTATACAAACTCCG
TTAAACTTGAATAAACACCCATACTGATTCCTCAATGATGATACTATCAG
GCCCGTGACAGTCTCTAAGCCGACCCCATACACATTCGACCTCGGTCATC
TGCTTGCGAACGATCCCAACCCTCTCGAGATCTCCCGCTCCGAACCCTTG
GACGTCAGTCTCAAGGCCACAGCCCGGGATGGCACCCAGTCTCTTCTCAA
CCAGCTCCTGACCACCTGCCCCATCACCTCCTCCCAACAGGGTGTTCTCC
TGACTCTCCCGTCTCCCTCCACTGTCCTCCCGCGCTTCAAGCCTCTTCCC
ACCCCCAAGCCCCCGACCAAGTGGGAGCTGTTCGCCCGCAAGAAGGGTAT
TGGCAAATACAGCAGCAGGCCTGGCGCAGCATTGGCCGATAAGGAGCGTC
GCAAGAAGTTGGTGTACGATGAAGAGAAGGGCGAGTGGGTTCCTCGCTGG
GGTTACAAGGGCAAGAACAAGTCCGATGATGAATGGCTTGTTGAGGTGAA
CGAGAAGGATTGGAAGAAGGAAGAAGAGGCGGCCGCTAAGGGAAGCTCGA
TCCGTGGACTATCTCGCGCCGAACGCAAAGACAGGATACGCCGCAACGAG
AGGAAAATGAGAGCGAATGAGCGCAAGAACAGGAAGTCGGGTGGTGGTTA
A back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:278637..279387+ >CAN33_10825-T1 ID=CAN33_10825-T1|Name=CAN33_10825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1278bp|location=Sequence derived from alignment at NKJJ01000009.1:278637..279387+ (Aspergillus niger FDAARGOS_311)
ATGGCGTCTACCGACTCCAAGCCCAAGCCGGAGAGACTGCCCGTGACAGT
CTCTAAGCCGACCCCATACACATTCGACCTCGGTCATCTGCTTGCGAACG
ATCCCAACCCTCTCGAGATCTCCCGCTCCGAACCCTTGGACGTCAGTCTC
AAGGCCACAGCCCGGGATGGCACCCAGTCTCTTCTCAACCAGCTCCTGAC
CACCTGCCCCATCACCTCCTCCCAACAGGGTGTTCTCCTGACTCTCCCGT
CTCCCTCCACTGTCCTCCCGCGCTTCAAGCCTCTTCCCACCCCCAAGCCC
CCGACCAAGTGGGAGCTGTTCGCCCGCAAGAAGGGTATTGGCAAATACAG
CAGCAGGCCTGGCGCAGCATTGGCCGATAAGGAGCGTCGCAAGAAGTTGG
TGTACGATGAAGAGAAGGGCGAGTGGGTTCCTCGCTGGGGTTACAAGGGC
AAGAACAAGTCCGATGATGAATGGCTTGTTGAGGTGAACGAGAAGGATTG
GAAGAAGGAAGAAGAGGCGGCCGCTAAGGGAAGCTCGATCCGTGGACTAT
CTCGCGCCGAACGCAAAGACAGGATACGCCGCAACGAGAGGAAAATGAGA
GCGAATGAGCGCAAGAACAGGAAGTCGGGTGGTGGTTAAATGGCGTCTAC
CGACTCCAAGCCCAAGCCGGAGAGACTGCCCGTGACAGTCTCTAAGCCGA
CCCCATACACATTCGACCTCGGTCATCTGCTTGCGAACGATCCCAACCCT
CTCGAGATCTCCCGCTCCGAACCCTTGGACGTCAGTCTCAAGGCCACAGC
CCGGGATGGCACCCAGTCTCTTCTCAACCAGCTCCTGACCACCTGCCCCA
TCACCTCCTCCCAACAGGGTGTTCTCCTGACTCTCCCGTCTCCCTCCACT
GTCCTCCCGCGCTTCAAGCCTCTTCCCACCCCCAAGCCCCCGACCAAGTG
GGAGCTGTTCGCCCGCAAGAAGGGTATTGGCAAATACAGCAGCAGGCCTG
GCGCAGCATTGGCCGATAAGGAGCGTCGCAAGAAGTTGGTGTACGATGAA
GAGAAGGGCGAGTGGGTTCCTCGCTGGGGTTACAAGGGCAAGAACAAGTC
CGATGATGAATGGCTTGTTGAGGTGAACGAGAAGGATTGGAAGAAGGAAG
AAGAGGCGGCCGCTAAGGGAAGCTCGATCCGTGGACTATCTCGCGCCGAA
CGCAAAGACAGGATACGCCGCAACGAGAGGAAAATGAGAGCGAATGAGCG
CAAGAACAGGAAGTCGGGTGGTGGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042254 | ribosome biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007023 |
| DBxref | PFAM:PF04939 |
| Product | Ribosome biogenesis regulatory protein (RRS1) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:278637..279387 + |
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