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CAN33_10850-T1, CAN33_10850-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10850-T1
Unique NameCAN33_10850-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:296138..296874-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10850-T1 ID=CAN33_10850-T1|Name=CAN33_10850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=737bp|location=Sequence derived from alignment at NKJJ01000009.1:296138..296874- (Aspergillus niger FDAARGOS_311)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGGGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAAGCATTTTACTTTTTAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
ATTGCAGTTGATGATATATATTTTCTACGGCTATGGTGGTGGCGCTGGTT
GGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATCCCGCGAGAAGAAT
GGCAAAGAATGAGAGTGCGCACGCATCGGAAATCGACAACATCCACGATT
CTATAAGCGAAAAGGACGAATCTCCCAAACCCAACACGACGCACGCAGGA
ATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATCGCGGGTTATTTTCAT
CTCCACGGGGAAATATCGCATTCAGTCCAGCCAGCCAGCCAACCAACCAG
TCGCTGCGTCATGTCCAAACCAAACCCATATATCGCACACATCAAGCTAA
CTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCGACGACATCCTCTGCCT
GCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000009.1:296138..296874-

>CAN33_10850-T1 ID=CAN33_10850-T1|Name=CAN33_10850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=621bp|location=Sequence derived from alignment at NKJJ01000009.1:296138..296874- (Aspergillus niger FDAARGOS_311)
TCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGC
CGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTC
ATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGATGG
ATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCTCGGC
CGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGA
GGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGT
CGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCC
CAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGT
CCTCGGCCGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCG
AACGCGAGGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGG
TCCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTC
AAGGGCCCAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCA
CCCGTGTCCTCGGCCGTACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28CAN33_10850Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10850-T1CAN33_10850-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10850-T1.cdsCAN33_10850-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10850-T1.exon3CAN33_10850-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_10850-T1.exon2CAN33_10850-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_10850-T1.exon1CAN33_10850-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR028626
DBxrefInterPro:IPR000289
DBxrefPFAM:PF01200
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:296138..296874 -
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