You are here

Home

CAN33_11005-T1, CAN33_11005-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11005-T1
Unique NameCAN33_11005-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:419649..421022+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11005-T1 ID=CAN33_11005-T1|Name=CAN33_11005-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1374bp|location=Sequence derived from alignment at NKJJ01000009.1:419649..421022+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGAATTTTCTCACATGCAATAAGCATACCAAAGACCTTCTCCCC
GCTCAGTACCCTGAACCTACGTTATTCCACTGCGGTCCGCACTATCGCCA
CCATGAGAAAGCCCGCACCGATAGCAATTGTCGGTGGTGGCCCATGTGGA
CTTACATTCGCACGCCTCCTTGAGACTGCCGGAATTGACTATGTCATATT
CGAGCGCGATATCTCAGCGGAAAATGCCCTCCAATTCCAAGGTGGCACTC
TCGACCTTCACGGAGAAACAGGCCAAGAAGCCCTGCGGCGCGCAGGCCTA
ATCGAAGAGTTTGAGAAGCTTGCGCGGCGAGACGCCACGACATTGACAGT
GCAAGACTTCCGTGGTAATCTTCGCAAGACATTTGGCGAAGGCCGCGATG
CCCCTGAAATCGACCGTCTGCAGCTGCGACAACTACTTCTGAATTCGTTA
CCAGCACATCGCATCAGGTGGGCCAAAGCACTTCAGGGGATTGAACGGAC
CAGCAAGGTTGGCTATGGGCATATTGCAGACTGCACACTACGCTTTACCG
ATGGCTCAACAGAAAGCGGTTTCAGACTCGTGGTTGGCGCTGACGGCGCC
TGGAGCAAGGTCCGACCACTGGTAAGTAGCCATTCGTTCACTATTATCAT
CGCACTTACTGAAATATTCTCCTAGATCACCCCCGCAGAGCCACAATACT
CTGGAAGAATGTTCATTGAAGGTCGCATCTCACCCGGCAACCCGCAGTAC
GCAGCAGCACACGAAATGGTAGGCGCCGGTAACTCTCTAGCCTCGACCCG
GGGCTGCACCCTCTGCATACAACAGATGTCCGACCGCTCCTACCGCGTCT
ATATGGGCCTTGAAGTACCGTCTACATTTACCAGGCCTGGAGGCGAAGGC
GACATAACCAAGCCCGAGAAAGCGCGCGCTGCAGTATTACAGCACTACGC
AGACTGGGCGCCGCACCTCCGAGCGTTCGTCGAAGCAGCAGAAGAACCCT
GGCGTCCGTGGCCACTGCACCGACTTGACCCAGAGATTTACCTCGACGGA
AGTCCGAACTGGACACGAGTCCCTGGAGTCACACTGCTAGGAGATGCAGC
GCACCTGGCGACACCGAATGGCGACGGTGTCAACATCGCCATGTATGACG
CGTTGGTATTGTTCGACTCGCTCATGGAAGAGGTGCGAAAAAAGCAGAGT
AACACTTACCAGGAAGGTGAAGACGCAGTAGCAGTAGAGCGCGCCATTTC
TGCTTATGAAGCGGACATGCGTGCCCGCGGACGAGCGCATATTCTGGACT
CGATAGACATGGAGGACATGATGTTTGCGGAGGATGGAACAGCGCGTATG
CTGGCGATGATTGGCCAGGGTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:419649..421022+

>CAN33_11005-T1 ID=CAN33_11005-T1|Name=CAN33_11005-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2640bp|location=Sequence derived from alignment at NKJJ01000009.1:419649..421022+ (Aspergillus niger FDAARGOS_311)
ATGTCTCGAATTTTCTCACATGCAATAAGCATACCAAAGACCTTCTCCCC
GCTCAGTACCCTGAACCTACGTTATTCCACTGCGGTCCGCACTATCGCCA
CCATGAGAAAGCCCGCACCGATAGCAATTGTCGGTGGTGGCCCATGTGGA
CTTACATTCGCACGCCTCCTTGAGACTGCCGGAATTGACTATGTCATATT
CGAGCGCGATATCTCAGCGGAAAATGCCCTCCAATTCCAAGGTGGCACTC
TCGACCTTCACGGAGAAACAGGCCAAGAAGCCCTGCGGCGCGCAGGCCTA
ATCGAAGAGTTTGAGAAGCTTGCGCGGCGAGACGCCACGACATTGACAGT
GCAAGACTTCCGTGGTAATCTTCGCAAGACATTTGGCGAAGGCCGCGATG
CCCCTGAAATCGACCGTCTGCAGCTGCGACAACTACTTCTGAATTCGTTA
CCAGCACATCGCATCAGGTGGGCCAAAGCACTTCAGGGGATTGAACGGAC
CAGCAAGGTTGGCTATGGGCATATTGCAGACTGCACACTACGCTTTACCG
ATGGCTCAACAGAAAGCGGTTTCAGACTCGTGGTTGGCGCTGACGGCGCC
TGGAGCAAGGTCCGACCACTGATCACCCCCGCAGAGCCACAATACTCTGG
AAGAATGTTCATTGAAGGTCGCATCTCACCCGGCAACCCGCAGTACGCAG
CAGCACACGAAATGGTAGGCGCCGGTAACTCTCTAGCCTCGACCCGGGGC
TGCACCCTCTGCATACAACAGATGTCCGACCGCTCCTACCGCGTCTATAT
GGGCCTTGAAGTACCGTCTACATTTACCAGGCCTGGAGGCGAAGGCGACA
TAACCAAGCCCGAGAAAGCGCGCGCTGCAGTATTACAGCACTACGCAGAC
TGGGCGCCGCACCTCCGAGCGTTCGTCGAAGCAGCAGAAGAACCCTGGCG
TCCGTGGCCACTGCACCGACTTGACCCAGAGATTTACCTCGACGGAAGTC
CGAACTGGACACGAGTCCCTGGAGTCACACTGCTAGGAGATGCAGCGCAC
CTGGCGACACCGAATGGCGACGGTGTCAACATCGCCATGTATGACGCGTT
GGTATTGTTCGACTCGCTCATGGAAGAGGTGCGAAAAAAGCAGAGTAACA
CTTACCAGGAAGGTGAAGACGCAGTAGCAGTAGAGCGCGCCATTTCTGCT
TATGAAGCGGACATGCGTGCCCGCGGACGAGCGCATATTCTGGACTCGAT
AGACATGGAGGACATGATGTTTGCGGAGGATGGAACAGCGCGTATGCTGG
CGATGATTGGCCAGGGTTGAATGTCTCGAATTTTCTCACATGCAATAAGC
ATACCAAAGACCTTCTCCCCGCTCAGTACCCTGAACCTACGTTATTCCAC
TGCGGTCCGCACTATCGCCACCATGAGAAAGCCCGCACCGATAGCAATTG
TCGGTGGTGGCCCATGTGGACTTACATTCGCACGCCTCCTTGAGACTGCC
GGAATTGACTATGTCATATTCGAGCGCGATATCTCAGCGGAAAATGCCCT
CCAATTCCAAGGTGGCACTCTCGACCTTCACGGAGAAACAGGCCAAGAAG
CCCTGCGGCGCGCAGGCCTAATCGAAGAGTTTGAGAAGCTTGCGCGGCGA
GACGCCACGACATTGACAGTGCAAGACTTCCGTGGTAATCTTCGCAAGAC
ATTTGGCGAAGGCCGCGATGCCCCTGAAATCGACCGTCTGCAGCTGCGAC
AACTACTTCTGAATTCGTTACCAGCACATCGCATCAGGTGGGCCAAAGCA
CTTCAGGGGATTGAACGGACCAGCAAGGTTGGCTATGGGCATATTGCAGA
CTGCACACTACGCTTTACCGATGGCTCAACAGAAAGCGGTTTCAGACTCG
TGGTTGGCGCTGACGGCGCCTGGAGCAAGGTCCGACCACTGATCACCCCC
GCAGAGCCACAATACTCTGGAAGAATGTTCATTGAAGGTCGCATCTCACC
CGGCAACCCGCAGTACGCAGCAGCACACGAAATGGTAGGCGCCGGTAACT
CTCTAGCCTCGACCCGGGGCTGCACCCTCTGCATACAACAGATGTCCGAC
CGCTCCTACCGCGTCTATATGGGCCTTGAAGTACCGTCTACATTTACCAG
GCCTGGAGGCGAAGGCGACATAACCAAGCCCGAGAAAGCGCGCGCTGCAG
TATTACAGCACTACGCAGACTGGGCGCCGCACCTCCGAGCGTTCGTCGAA
GCAGCAGAAGAACCCTGGCGTCCGTGGCCACTGCACCGACTTGACCCAGA
GATTTACCTCGACGGAAGTCCGAACTGGACACGAGTCCCTGGAGTCACAC
TGCTAGGAGATGCAGCGCACCTGGCGACACCGAATGGCGACGGTGTCAAC
ATCGCCATGTATGACGCGTTGGTATTGTTCGACTCGCTCATGGAAGAGGT
GCGAAAAAAGCAGAGTAACACTTACCAGGAAGGTGAAGACGCAGTAGCAG
TAGAGCGCGCCATTTCTGCTTATGAAGCGGACATGCGTGCCCGCGGACGA
GCGCATATTCTGGACTCGATAGACATGGAGGACATGATGTTTGCGGAGGA
TGGAACAGCGCGTATGCTGGCGATGATTGGCCAGGGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11005CAN33_11005Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11005-T1.exon1CAN33_11005-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_11005-T1.exon2CAN33_11005-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11005-T1.cdsCAN33_11005-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11005-T1CAN33_11005-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002938
ProductFAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:419649..421022 +
Powered by Drupal