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CAN33_11340-T1, CAN33_11340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11340-T1
Unique NameCAN33_11340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:600403..601281-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11340-T1 ID=CAN33_11340-T1|Name=CAN33_11340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=879bp|location=Sequence derived from alignment at NKJJ01000009.1:600403..601281- (Aspergillus niger FDAARGOS_311)
ATGTCGTTTCCCTACAAGAACGTCCTCATCATCGGTGCCACCTCCGGCAT
CGGTAAGGCGCTCGCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCA
TTGCCGGCAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGC
AGCGACAAGGTCGCATCCAAGGTCTTTGACGTGATGCAGCTGGACCAGGT
ACGCGGCCCCCCTCCTCCCCCTGTACCATCCATATCACACCCACACCCTA
CTCACGTACTATTACTACATAGATCCCCAGTTCGCCACCGAAATCACCAC
CGCCCACCCCGACCTAGACTGCATCTTCATCAACTCCGGCATCCAGCGCC
CCTTCGACTTCTCCAAGCCCAACTCCGTCGATCTCACCACCTTCGACACC
GAGCTCATCACCAACTACACCTCCGCCGTCTACCTCACCAAGGCCTTCCT
CCCCACCTGCAGTCCCTCCCCACCCAGACCGCCCTCGCCTACACCACCTC
CCAAATGGCCCTCGTGCCCATGATGCGCTGCCCCAACTACGGCGCCTCCA
AGGCCGCCTTGCACCACTTCATCCTGGCTCTGCGCACGCAGGTCGCTGAG
GGCCCCGGCAACGTCAAGGTGCTGGAAATCTACCCGCCCGCTGTGCAGAC
CGAGCTGCACGATCCCAAGCACCAGCCTGATCTGAAGAACGGACACTTGA
TCGGCATGCCGTTGGATGAGTTTGTCGGTGAGGTGTGGCGCAGATTGCAG
TCTGGTGAGGATCAGATTGCTGTGGGTTCGGCGAACGATATCTACGAGGC
CTTTGAGACGAAGAGGCAGAGTCTGTATGCGGACATGACGGCGATGTTGA
ACGGATTGTTGAAGCAGTTCTTGGTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000009.1:600403..601281-

>CAN33_11340-T1 ID=CAN33_11340-T1|Name=CAN33_11340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2241bp|location=Sequence derived from alignment at NKJJ01000009.1:600403..601281- (Aspergillus niger FDAARGOS_311)
ACCGCCCTCGCCTACACCACCTCCCAAATGGCCCTCGTGCCCATGATGCG
CTGCCCCAACTACGGCGCCTCCAAGGCCGCCTTGCACCACTTCATCCTGG
CTCTGCGCACGCAGGTCGCTGAGGGCCCCGGCAACGTCAAGGTGCTGGAA
ATCTACCCGCCCGCTGTGCAGACCGAGCTGCACGATCCCAAGCACCAGCC
TGATCTGAAGAACGGACACTTGATCGGCATGCCGTTGGATGAGTTTGTCG
GTGAGGTGTGGCGCAGATTGCAGTCTGGTGAGGATCAGATTGCTGTGGGT
TCGGCGAACGATATCTACGAGGCCTTTGAGACGAAGAGGCAGAGTCTGTA
TGCGGACATGACGGCGATGTTGAACGGATTGTTGAAGCAGTTCTTGGTGT
AATTCGCCACCGAAATCACCACCGCCCACCCCGACCTAGACTGCATCTTC
ATCAACTCCGGCATCCAGCGCCCCTTCGACTTCTCCAAGCCCAACTCCGT
CGATCTCACCACCTTCGACACCGAGCTCATCACCAACTACACCTCCGCCA
TGTCGTTTCCCTACAAGAACGTCCTCATCATCGGTGCCACCTCCGGCATC
GGTAAGGCGCTCGCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCAT
TGCCGGCAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGCA
GCGACAAGGTCGCATCCAAGGTCTTTGACGTGATGCAGCTGGACCAGACC
GCCCTCGCCTACACCACCTCCCAAATGGCCCTCGTGCCCATGATGCGCTG
CCCCAACTACGGCGCCTCCAAGGCCGCCTTGCACCACTTCATCCTGGCTC
TGCGCACGCAGGTCGCTGAGGGCCCCGGCAACGTCAAGGTGCTGGAAATC
TACCCGCCCGCTGTGCAGACCGAGCTGCACGATCCCAAGCACCAGCCTGA
TCTGAAGAACGGACACTTGATCGGCATGCCGTTGGATGAGTTTGTCGGTG
AGGTGTGGCGCAGATTGCAGTCTGGTGAGGATCAGATTGCTGTGGGTTCG
GCGAACGATATCTACGAGGCCTTTGAGACGAAGAGGCAGAGTCTGTATGC
GGACATGACGGCGATGTTGAACGGATTGTTGAAGCAGTTCTTGGTGTAAT
TCGCCACCGAAATCACCACCGCCCACCCCGACCTAGACTGCATCTTCATC
AACTCCGGCATCCAGCGCCCCTTCGACTTCTCCAAGCCCAACTCCGTCGA
TCTCACCACCTTCGACACCGAGCTCATCACCAACTACACCTCCGCCATGT
CGTTTCCCTACAAGAACGTCCTCATCATCGGTGCCACCTCCGGCATCGGT
AAGGCGCTCGCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCATTGC
CGGCAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGCAGCG
ACAAGGTCGCATCCAAGGTCTTTGACGTGATGCAGCTGGACCAGACCGCC
CTCGCCTACACCACCTCCCAAATGGCCCTCGTGCCCATGATGCGCTGCCC
CAACTACGGCGCCTCCAAGGCCGCCTTGCACCACTTCATCCTGGCTCTGC
GCACGCAGGTCGCTGAGGGCCCCGGCAACGTCAAGGTGCTGGAAATCTAC
CCGCCCGCTGTGCAGACCGAGCTGCACGATCCCAAGCACCAGCCTGATCT
GAAGAACGGACACTTGATCGGCATGCCGTTGGATGAGTTTGTCGGTGAGG
TGTGGCGCAGATTGCAGTCTGGTGAGGATCAGATTGCTGTGGGTTCGGCG
AACGATATCTACGAGGCCTTTGAGACGAAGAGGCAGAGTCTGTATGCGGA
CATGACGGCGATGTTGAACGGATTGTTGAAGCAGTTCTTGGTGTAATTCG
CCACCGAAATCACCACCGCCCACCCCGACCTAGACTGCATCTTCATCAAC
TCCGGCATCCAGCGCCCCTTCGACTTCTCCAAGCCCAACTCCGTCGATCT
CACCACCTTCGACACCGAGCTCATCACCAACTACACCTCCGCCATGTCGT
TTCCCTACAAGAACGTCCTCATCATCGGTGCCACCTCCGGCATCGGTAAG
GCGCTCGCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCATTGCCGG
CAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGCAGCGACA
AGGTCGCATCCAAGGTCTTTGACGTGATGCAGCTGGACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11340CAN33_11340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11340-T1CAN33_11340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11340-T1.cdsCAN33_11340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11340-T1.exon3CAN33_11340-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_11340-T1.exon2CAN33_11340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_11340-T1.exon1CAN33_11340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:600403..601281 -
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