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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:644047..645258- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_1135-T1 ID=CAN33_1135-T1|Name=CAN33_1135-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1212bp|location=Sequence derived from alignment at NKJJ01000004.1:644047..645258- (Aspergillus niger FDAARGOS_311)
ATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAA
CAATAACCGCAAGTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCA
AGCTCCCTATCATCTACAGATGGCACAATGTCCCCGACACAGACGAATGG
CGCTGCGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCA
CCTCTACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAA
ATGACGACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCC
GCCAACCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTT
CCGCAAGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATG
CCTGGGAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCG
CGCATCTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCAT
TGCGTCCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCC
TCACCGCTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTAC
CGTGCCAAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGA
GAGCGGGTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGT
GGAAGCTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATC
GGGAGGCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTC
GCTGATTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGT
TGATACGCATGGTTTGTTACCTCGGTTGATCCCTTTGTCACGTCACATTT
GATTGCTAATGGTCTTTGGTTTAGTCTGGCAAATCGCGCAGAGAGACTAC
AAGTTTGGAAAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATGC
CGTGGGAAACCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCGC
ATAGTGTGCTGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGCT
GCTACTACGTCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGGA
GGGTGTCGAGGTGGAGACAAAGGTCACCACGGCGATTGCGGTGCCTACCA
AGAGACCTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:644047..645258- >CAN33_1135-T1 ID=CAN33_1135-T1|Name=CAN33_1135-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2421bp|location=Sequence derived from alignment at NKJJ01000004.1:644047..645258- (Aspergillus niger FDAARGOS_311)
ACCTATAGTCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGAAAGGGCG
GTAATAAGTCCCTGACGAAGGTTACTTATGATGCCGTGGGAAACCATTTC
CGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGCTGTTCAC
GGCTGATCTGAGGACCTTTTCGGATCGATTGGCTGCTACTACGTCGAAGA
AGGTGGATGTGAAGGTAGAGAAGGATGACAAGGAGGATGAGCTCTGCATC
AACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAACAATAACCGCAAGT
ACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCAAGCTCCCTATCATC
TACAGATGGCACAATGTCCCCGACACAGACGAATGGCGCTGCGTTCTCCA
CGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTCTACTACCGAA
CCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGACGACGATACC
ACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCAACCTCACCTC
CCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGCAAGAAGGCCC
CTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTGGGAAGCCCTG
ATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCATCTCGCAGAT
GGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCGTCCATCAATG
GCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCACCGCTCACGAC
GTGGAGGACCTATAGTCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGA
AAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATGCCGTGGGAAA
CCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGC
TGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGCTGCTACTACG
TCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGGAGGATGAGCT
CTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAACAATAAC
CGCAAGTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCAAGCTCCC
TATCATCTACAGATGGCACAATGTCCCCGACACAGACGAATGGCGCTGCG
TTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTCTAC
TACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGACGA
CGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCAACC
TCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGCAAG
AAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTGGGA
AGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCATCT
CGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCGTCC
ATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCACCGC
TCACGACGTGGAGGACCTATAGTCTGGCAAATCGCGCAGAGAGACTACAA
GTTTGGAAAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATGCCG
TGGGAAACCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCGCAT
AGTGTGCTGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGCTGC
TACTACGTCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGGAGG
ATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAA
CAATAACCGCAAGTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCA
AGCTCCCTATCATCTACAGATGGCACAATGTCCCCGACACAGACGAATGG
CGCTGCGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCA
CCTCTACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAA
ATGACGACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCC
GCCAACCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTT
CCGCAAGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATG
CCTGGGAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCG
CGCATCTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCAT
TGCGTCCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCC
TCACCGCTCACGACGTGGAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006289 | nucleotide-excision repair |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0003684 | damaged DNA binding |
| GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011257 |
| DBxref | InterPro:IPR012904 |
| DBxref | PFAM:PF07934 |
| Product | 8-oxoguanine DNA glycosylase N-terminal domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:644047..645258 - |
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