You are here

Home

CAN33_11350-T1, CAN33_11350-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11350-T1
Unique NameCAN33_11350-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:607376..608509+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11350-T1 ID=CAN33_11350-T1|Name=CAN33_11350-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1134bp|location=Sequence derived from alignment at NKJJ01000009.1:607376..608509+ (Aspergillus niger FDAARGOS_311)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGGTGGGTGATCTCAGCGAATATATATCCCGGACCGTGGCGTGACTCCTA
TTTAAAAGTACTCCGAATGTACGACTGATATCTATTCTGCAGAAACACCC
GAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCCGCATACGCTT
CATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGCCTCCGCCGCG
TCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGACACCACCGAC
TTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGCATATCACGTC
ATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCCCCAACCGTAT
CGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGATAACCAGAGAG
GTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCCTGCTGTTCGG
CCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGACATCTCTTTG
TGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGACGGGGTGCCG
CTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAAAGTTGCGAGG
GGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGATAATGCGATTG
AGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGATTGTCTGGAGG
TATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGCAAGCAATATAATGC
AAGGTGTGGCACGATAATTGTTGCCGAGTGTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:607376..608509+

>CAN33_11350-T1 ID=CAN33_11350-T1|Name=CAN33_11350-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2088bp|location=Sequence derived from alignment at NKJJ01000009.1:607376..608509+ (Aspergillus niger FDAARGOS_311)
ATGGTAGTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATC
CCTTCCCCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTG
GCGAAGCAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTC
TATTTTGTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATG
TGAAGCCCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGA
GCTTGCTCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAA
AGCACTCTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAG
TGAAACACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCC
GCATACGCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGC
CTCCGCCGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGA
CACCACCGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGC
ATATCACGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCC
CCAACCGTATCGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGAT
AACCAGAGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCC
TGCTGTTCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGA
CATCTCTTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGA
CGGGGTGCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAA
AGTTGCGAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGAT
AATGCGATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGAT
TGTCTGGAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGCAAGC
AATATAATGCAAGGTGTGGCACGATAATTGTTGCCGAGTGTTGAATGGTA
GTCCTCGCCGATATCCAATCCTCCAATGCCCGGATTGCTACATCCCTTCC
CCAGGGCATGGTAGCTGTCTTTGTCGGAGCAACAAGTGGCATTGGCGAAG
CAACCCTCAAGCAATTCGCTAAGCATGCTACACGGCCCCGCGTCTATTTT
GTCGGTCGCAAACAAGACGCGGGTAACCGTATCGTCGCCGAATGTGAAGC
CCTGAATCCAGAGGGGGAATATATCTTCATCCCCGCAGACGTGAGCTTGC
TCAGCAATGTCGACGAGGTCTGTCGTAACATCAAGACCAAGGAAAGCACT
CTCAATCTTCTGGTTCTCACGCCGGGAATAGCGGCTATACATAGTGAAAC
ACCCGAAGGACTTCGCAAGATCACCTCCCTCCTCTACTTCGCCCGCATAC
GCTTCATCCTAAACCTCCTCCCTCTCCTCCAACAAGCCACCAGCCTCCGC
CGCGTCATAACTGTCGGGGCAGCCGGATCCGAAGGCCCCATCGACACCAC
CGACTTCGAAGGCAGAAAGGTGTCAGCCCCCTTTTTTCGCGGGCATATCA
CGTCATTAACTACGGTGGCTCTGGAGACCTTAGCTGAGAAAGCCCCAACC
GTATCGTTCATCAATACTCACCCCGGAGCTGTACAAACCGGGATAACCAG
AGAGGTGGATAATCTCCGTATGTGGATTGTCTGGCTTGCTCTCCTGCTGT
TCGGCCGTTGGGTCTGTATCCCTGTGATAGAGAGCGGAGAGAGACATCTC
TTTGTGGCTACGAGTGCGAAGTATCCGGCGCGGGATGGGGACGACGGGGT
GCCGCTGTCGGAGAGTGTCGTGGTTGCGCGGGGTGTGGATGGAAAGTTGC
GAGGGGGTGTTTATTGTGTTACCTCGGATGGGGAGAGCTCGGATAATGCG
ATTGAGGTTCTGAAAGGCTTGCGAGAAATGGGCATTGGAGAGATTGTCTG
GAGGTATACGGAGAGTCAGTTCAAGCGGATCACCGGGGGCAAGCAATATA
ATGCAAGGTGTGGCACGATAATTGTTGCCGAGTGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11350CAN33_11350Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11350-T1.exon1CAN33_11350-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_11350-T1.exon2CAN33_11350-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11350-T1.cdsCAN33_11350-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11350-T1CAN33_11350-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:607376..608509 +
Powered by Drupal