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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000009.1:774945..776707- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_11600-T1 ID=CAN33_11600-T1|Name=CAN33_11600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1763bp|location=Sequence derived from alignment at NKJJ01000009.1:774945..776707- (Aspergillus niger FDAARGOS_311)
ATGTCTCGATGGTGGCTTGCGTCTACCAGCTTCCCCGTTCTGGCGGTACT
TTTCCATCTCAACCGGATCAGTGATGATAATCGCTAAGATGTCCAGGGAA
CCATCAGCGCCATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGT
TGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCGATGGCAGCGCAGAC
TACTCGGTGTGTCTCCATAAACTACGATACTTGAGTTTCAGTTTCCCAGT
ACCGCTTCTAATAACCCAACAGGGCCGTGACTCTCAAGACTATATCGTTG
GCCCTTTCGGCTACCGCAGACCTTACCCTCCTGCTGACCATGCTGCTAAA
ATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATAT
CCTCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCC
CAAATTATCGCCCCTCAAACATGGCACTATACACAGAATTTCTACTACGG
CATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCT
ACGCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATC
ATCGAAAACACGAGCATCATCCTCCGCGCATTCACCCTCGCTGCTTTCCT
CCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAG
ATGCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAAC
ATCGTCCCGAAAACTCACCTGGGACGAAGCCTTCTAATCCCCTACGCTAC
GGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTC
AAGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTA
TTCACCTCCACAAGACACCACATCCCGACATCGTCAAAATCAAACAAATC
AAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTT
CTGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCT
CCGAGCGCAGTCAGGGATGGACGTATTTCGAGTCTTTGTATTTCACGTTC
GTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCT
GGGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGA
CGACGTTGGTTGGGGTCGTGGGTCAGGTGGGGTTTCATACGGTGGTTTAT
TTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACG
GGTAGGTATGTTTGTGGATGGGAGGAGGCTTGATTTATCTGCTCCTGCCG
GGGGAGGGGCAGATGTGAGGGTGGCAGGTGGTGATTTGGAGGTCGATATA
GAGAGACAGGCCTGCCCAACTCTTGACATAGTGACTCTGCCACTTGAGAG
ACCGCGTCCGGGACAACACAAACTGCACCTGTGTGAAGAGATCAAATCTC
TCGTGGACATCCTCAAAGATGACGACAGAGACGTAGATCTACATCGTGAA
TGGGCACGTATTGTGTCTCTCCTCAGTGTTGATGAGGGTGGCGGAGCAGA
AGTGTTTGGGGCTGAGACTCATCGGCAGCAAGTAATAAGAGAGGTGGTAT
CTGCGAATCAGTCCGCGACGGATAGAGATAAGGAAATTTTATGGATGGCC
AAGTTGCTGGTTGAGAAGTTGTGCTCGTGTTTGAGGGAGGATGTGAGGTG
TGAGGGTAGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000009.1:774945..776707- >CAN33_11600-T1 ID=CAN33_11600-T1|Name=CAN33_11600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6480bp|location=Sequence derived from alignment at NKJJ01000009.1:774945..776707- (Aspergillus niger FDAARGOS_311)
CCTTCTAATCCCCTACGCTACGGGGGGATCACCTGCCTCGGCCTATTCGT
CAGCTCGATTGCCTCGTTCTCAAGAAAGATGGGCGAGCTACGACTGAAAT
TCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCCGAC
ATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTG
GATCATCTTCTCCTTCTACTTCTGCGCATGGCTTCTCCTCTGGCTCGTCA
GCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTATTTC
GAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGA
TTTCTATCCGACTAGTAATCTGGGGAAGTCGTTCTTTGTGTTTTGGGCGC
TGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAGGTG
GGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTC
GTGGGGAGGATTTATGAGACGGGTAGGTATGTTTGTGGATGGGAGGAGGC
TTGATTTATCTGCTCCTGCCGGGGGAGGGGCAGATGTGAGGGTGGCAGGT
GGTGATTTGGAGGTCGATATAGAGAGACAGGCCTGCCCAACTCTTGACAT
AGTGACTCTGCCACTTGAGAGACCGCGTCCGGGACAACACAAACTGCACC
TGTGTGAAGAGATCAAATCTCTCGTGGACATCCTCAAAGATGACGACAGA
GACGTAGATCTACATCGTGAATGGGCACGTATTGTGTCTCTCCTCAGTGT
TGATGAGGGTGGCGGAGCAGAAGTGTTTGGGGCTGAGACTCATCGGCAGC
AAGTAATAAGAGAGGTGGTATCTGCGAATCAGTCCGCGACGGATAGAGAT
AAGGAAATTTTATGGATGGCCAAGTTGCTGGTTGAGAAGTTGTGCTCGTG
TTTGAGGGAGGATGTGAGGTGTGAGGGTAGATAGGGCCGTGACTCTCAAG
ACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACCCTCCTGCTGAC
CATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGA
TTTACTTCATATCCTCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTG
CATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCACTATACACAGAA
TTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTC
TTTTATCAATCTACGCATGCAGCGTCCGTACCATCCACCTAAGCATCCAA
GATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGCGCATTCACCCT
CGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGAT
GGTCCCTAGCAGATGCACTCTACTGGTCTGCATACACCATTCTTACAGTC
GGAATCGGCAACATCGGAACCATCAGCGCCATGGCAACAATATTCGGTAT
TTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGA
CTGCGATGGCAGCGCAGACTACTCGATGTCTCGATGGTGGCTTGCGTCTA
CCAGCTTCCCCGTTCTGGCGCCTTCTAATCCCCTACGCTACGGGGGGATC
ACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCAAGAAAGAT
GGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCC
ACAAGACACCACATCCCGACATCGTCAAAATCAAACAAATCAAATCCCAC
TGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTCTGCGCATG
GCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCA
GTCAGGGATGGACGTATTTCGAGTCTTTGTATTTCACGTTCGTGTCGCTG
ACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTGGGGAAGTC
GTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGG
TTGGGGTCGTGGGTCAGGTGGGGTTTCATACGGTGGTTTATTTTGTGCGG
AGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGGGTAGGTAT
GTTTGTGGATGGGAGGAGGCTTGATTTATCTGCTCCTGCCGGGGGAGGGG
CAGATGTGAGGGTGGCAGGTGGTGATTTGGAGGTCGATATAGAGAGACAG
GCCTGCCCAACTCTTGACATAGTGACTCTGCCACTTGAGAGACCGCGTCC
GGGACAACACAAACTGCACCTGTGTGAAGAGATCAAATCTCTCGTGGACA
TCCTCAAAGATGACGACAGAGACGTAGATCTACATCGTGAATGGGCACGT
ATTGTGTCTCTCCTCAGTGTTGATGAGGGTGGCGGAGCAGAAGTGTTTGG
GGCTGAGACTCATCGGCAGCAAGTAATAAGAGAGGTGGTATCTGCGAATC
AGTCCGCGACGGATAGAGATAAGGAAATTTTATGGATGGCCAAGTTGCTG
GTTGAGAAGTTGTGCTCGTGTTTGAGGGAGGATGTGAGGTGTGAGGGTAG
ATAGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCA
GACCTTACCCTCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGG
ATACCTTGCGACAGCACTGATTTACTTCATATCCTCAATGCTTCTCTTCA
GTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAA
ACATGGCACTATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTC
CTACCTCTTCGTTGCATTTCTTTTATCAATCTACGCATGCAGCGTCCGTA
CCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATC
ATCCTCCGCGCATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCAT
CTACATTCCCATCGAAGGATGGTCCCTAGCAGATGCACTCTACTGGTCTG
CATACACCATTCTTACAGTCGGAATCGGCAACATCGGAACCATCAGCGCC
ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAAT
CGTTTCTTCAGATGCAGGGACTGCGATGGCAGCGCAGACTACTCGATGTC
TCGATGGTGGCTTGCGTCTACCAGCTTCCCCGTTCTGGCGCCTTCTAATC
CCCTACGCTACGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATT
GCCTCGTTCTCAAGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGA
ACAAGAAGGTATTCACCTCCACAAGACACCACATCCCGACATCGTCAAAA
TCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTC
TCCTTCTACTTCTGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTAT
CTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTATTTCGAGTCTTTGT
ATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCG
ACTAGTAATCTGGGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGT
GCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAGGTGGGGTTTCATA
CGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGA
TTTATGAGACGGGTAGGTATGTTTGTGGATGGGAGGAGGCTTGATTTATC
TGCTCCTGCCGGGGGAGGGGCAGATGTGAGGGTGGCAGGTGGTGATTTGG
AGGTCGATATAGAGAGACAGGCCTGCCCAACTCTTGACATAGTGACTCTG
CCACTTGAGAGACCGCGTCCGGGACAACACAAACTGCACCTGTGTGAAGA
GATCAAATCTCTCGTGGACATCCTCAAAGATGACGACAGAGACGTAGATC
TACATCGTGAATGGGCACGTATTGTGTCTCTCCTCAGTGTTGATGAGGGT
GGCGGAGCAGAAGTGTTTGGGGCTGAGACTCATCGGCAGCAAGTAATAAG
AGAGGTGGTATCTGCGAATCAGTCCGCGACGGATAGAGATAAGGAAATTT
TATGGATGGCCAAGTTGCTGGTTGAGAAGTTGTGCTCGTGTTTGAGGGAG
GATGTGAGGTGTGAGGGTAGATAGGGCCGTGACTCTCAAGACTATATCGT
TGGCCCTTTCGGCTACCGCAGACCTTACCCTCCTGCTGACCATGCTGCTA
AAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCAT
ATCCTCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCAC
CCCAAATTATCGCCCCTCAAACATGGCACTATACACAGAATTTCTACTAC
GGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAAT
CTACGCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCA
TCATCGAAAACACGAGCATCATCCTCCGCGCATTCACCCTCGCTGCTTTC
CTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGC
AGATGCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCA
ACATCGGAACCATCAGCGCCATGGCAACAATATTCGGTATTTGTGCAGTT
AGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCGATGGC
AGCGCAGACTACTCGATGTCTCGATGGTGGCTTGCGTCTACCAGCTTCCC
CGTTCTGGCGCCTTCTAATCCCCTACGCTACGGGGGGATCACCTGCCTCG
GCCTATTCGTCAGCTCGATTGCCTCGTTCTCAAGAAAGATGGGCGAGCTA
CGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACC
ACATCCCGACATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCC
GCCACCGCTGGATCATCTTCTCCTTCTACTTCTGCGCATGGCTTCTCCTC
TGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATG
GACGTATTTCGAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCG
GGTATGGCGATTTCTATCCGACTAGTAATCTGGGGAAGTCGTTCTTTGTG
TTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGT
GGGTCAGGTGGGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGA
AGGGATGGTCGTGGGGAGGATTTATGAGACGGGTAGGTATGTTTGTGGAT
GGGAGGAGGCTTGATTTATCTGCTCCTGCCGGGGGAGGGGCAGATGTGAG
GGTGGCAGGTGGTGATTTGGAGGTCGATATAGAGAGACAGGCCTGCCCAA
CTCTTGACATAGTGACTCTGCCACTTGAGAGACCGCGTCCGGGACAACAC
AAACTGCACCTGTGTGAAGAGATCAAATCTCTCGTGGACATCCTCAAAGA
TGACGACAGAGACGTAGATCTACATCGTGAATGGGCACGTATTGTGTCTC
TCCTCAGTGTTGATGAGGGTGGCGGAGCAGAAGTGTTTGGGGCTGAGACT
CATCGGCAGCAAGTAATAAGAGAGGTGGTATCTGCGAATCAGTCCGCGAC
GGATAGAGATAAGGAAATTTTATGGATGGCCAAGTTGCTGGTTGAGAAGT
TGTGCTCGTGTTTGAGGGAGGATGTGAGGTGTGAGGGTAGATAGGGCCGT
GACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACCC
TCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCG
ACAGCACTGATTTACTTCATATCCTCAATGCTTCTCTTCAGTCTCATCGG
CGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCACT
ATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTC
GTTGCATTTCTTTTATCAATCTACGCATGCAGCGTCCGTACCATCCACCT
AAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGCG
CATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCC
ATCGAAGGATGGTCCCTAGCAGATGCACTCTACTGGTCTGCATACACCAT
TCTTACAGTCGGAATCGGCAACATCGGAACCATCAGCGCCATGGCAACAA
TATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCA
GATGCAGGGACTGCGATGGCAGCGCAGACTACTCGATGTCTCGATGGTGG
CTTGCGTCTACCAGCTTCCCCGTTCTGGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000091.4 |
| DBxref | InterPro:IPR013099 |
| DBxref | PFAM:PF07885 |
| Product | Ion channel family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000009.1 | supercontig | NKJJ01000009.1:774945..776707 - |
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