You are here

Home

CAN33_11790-T1, CAN33_11790-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11790-T1
Unique NameCAN33_11790-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:873382..873891-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11790-T1 ID=CAN33_11790-T1|Name=CAN33_11790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=510bp|location=Sequence derived from alignment at NKJJ01000009.1:873382..873891- (Aspergillus niger FDAARGOS_311)
ATGTCCATCATCAAGTCGATCCTGGAATGCCTCTGGGGACCATCACCCGA
CGTCTACCAGACCGATGCGCGCACTTCCGCCGTTGCGTCAGACATTGTCA
ATATCCTCCTGACCGGTGAAACCCCCGAGGCCATTCAGAAAGGACTGAAA
GAACAAGTCGATGCCAACGGGTGGAGCGATTCCATCGCCCAAGCTATCCT
CCATGGCCTCAACGACGCTATCACAGCCGGAGCGGAAATGGCTGGCCCTG
CTGCCGATGCTCTGAACAAAGCCAAAGAAGCTGCAGTGGATTTTGCCAAA
GAGCACCCAGCTTTTACGATCCTTCTTGCTTTGGGGGTGCTGGCGGCATT
AGCACCGTGGGTGCTCGAAGTCTTGGGATTCGGGGAGTTGGGACCAATTG
CTGGGTCTTTCGCAGCGAGATGGCAAGCAGCATATGCTGGCTATGTGCCT
CGAGGTGCACTATTTACGTACTTCCAACGGTTGGGGATGAAGTGGCATTG
GGTGGGTTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:873382..873891-

>CAN33_11790-T1 ID=CAN33_11790-T1|Name=CAN33_11790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=510bp|location=Sequence derived from alignment at NKJJ01000009.1:873382..873891- (Aspergillus niger FDAARGOS_311)
ATGTCCATCATCAAGTCGATCCTGGAATGCCTCTGGGGACCATCACCCGA
CGTCTACCAGACCGATGCGCGCACTTCCGCCGTTGCGTCAGACATTGTCA
ATATCCTCCTGACCGGTGAAACCCCCGAGGCCATTCAGAAAGGACTGAAA
GAACAAGTCGATGCCAACGGGTGGAGCGATTCCATCGCCCAAGCTATCCT
CCATGGCCTCAACGACGCTATCACAGCCGGAGCGGAAATGGCTGGCCCTG
CTGCCGATGCTCTGAACAAAGCCAAAGAAGCTGCAGTGGATTTTGCCAAA
GAGCACCCAGCTTTTACGATCCTTCTTGCTTTGGGGGTGCTGGCGGCATT
AGCACCGTGGGTGCTCGAAGTCTTGGGATTCGGGGAGTTGGGACCAATTG
CTGGGTCTTTCGCAGCGAGATGGCAAGCAGCATATGCTGGCTATGTGCCT
CGAGGTGCACTATTTACGTACTTCCAACGGTTGGGGATGAAGTGGCATTG
GGTGGGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11790CAN33_11790Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11790-T1.cdsCAN33_11790-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11790-T1.exon1CAN33_11790-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11790-T1CAN33_11790-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR038213
DBxrefInterPro:IPR009311
DBxrefPFAM:PF06140
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:873382..873891 -
Powered by Drupal