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CAN33_11860-T1, CAN33_11860-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11860-T1
Unique NameCAN33_11860-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:912453..913646-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11860-T1 ID=CAN33_11860-T1|Name=CAN33_11860-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1194bp|location=Sequence derived from alignment at NKJJ01000009.1:912453..913646- (Aspergillus niger FDAARGOS_311)
ATGCTGTCCGCTTTTTCCGACACCGCTGTAGGCACCATGGGCAGACTGTT
GCTCCGGAGTCCCTCTCTCAGATATCCTGAGGACGAAGAGGGTTTCCAAC
TGCTTCAATTTGCTCGTGCATGGTCTGTAATAGAAGTTCCGAACTCTAGT
GCCATATGGCTAGATGAGGAAAGTGGAATGCAGAGACGAGACGAGCTGGT
CAATCCCTCTTTTCCGACGACGGCCTTGGAGACTCAAGAGGCAGTTCCCT
CTACTCCCACTGTACCTAGATATAGGGACAAGATAATAATTGTTGACTGG
TACGGGGATGACGATCCTTCCAACCCCTTGAATTGGTCCTTTCAAAAGAA
GGCGGTCGTATTCGTCATTATCAACTTCAGTGCCTGCGTCGTCTACATGT
GCGCAGCAATTTATACGCCATCCCAACCAGAAATTGAACGCACTTTTAAT
ATCTCAGCGACCATCTCCAGCTTGGGACTTGCTCTTTTCCTTCTAGGATA
CGGTAGCGGCTCGCTGCTCTTTGCGCCAATCTCCGAGATTCCCTCGATTG
GTCGAAACTGGCCCTATCTAATTTCCTTATTCATCTTCGTCGTGCTCGCA
ATCCCAACGGCATTATCGGAGACATTTGAGGGGTTGATGATTTTACGTTT
CATTCAAGGCTTCTTCGGATCCCCGATACTCTCGACTGGGGGAGCATCAT
TGAGAGATATCTCGGATCCAAGTATGCGACCATATGTGCTGTATTCCTGG
GCAGATTTTGCATTCGCAGGGCCTTCAATAGGCAACATAATTGCGGGATA
CGGCGTGCCCCAACTGGGCTGGCGGTGGAGCCTGTGGGAAATTCTGATTT
GCACTAGCCCTGCTTTGATCTTACACGTTCGTTAGAGTATCCGTGTGATC
TATTATCAAATATTCTAATAGTATATACCGCAGTTATTTCTTCCGGAGAC
ATCTGAGGAGAACATTCTCCTTCGCCGCGCTCAGCGAATTCGCCAGGCAA
CCGGCCTTGGTTATTACCGGGCCAAATCCGAGCTCAACGCTGAAAGGTCT
ACATGGAAGGATCGTTTCTGGGGTTTTCTCGTCATGCCCTGGAAAATCAA
CGTGCTAGACCCTTCTGTCATGTTCACTAGCATATACACTGGGTTCATCT
ATGCCATTTTCAATTCCATGTTTGAGTTCTTTGATATTATATAG
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Coding sequence (CDS) from alignment at NKJJ01000009.1:912453..913646-

>CAN33_11860-T1 ID=CAN33_11860-T1|Name=CAN33_11860-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2274bp|location=Sequence derived from alignment at NKJJ01000009.1:912453..913646- (Aspergillus niger FDAARGOS_311)
TTATTTCTTCCGGAGACATCTGAGGAGAACATTCTCCTTCGCCGCGCTCA
GCGAATTCGCCAGGCAACCGGCCTTGGTTATTACCGGGCCAAATCCGAGC
TCAACGCTGAAAGGTCTACATGGAAGGATCGTTTCTGGGGTTTTCTCGTC
ATGCCCTGGAAAATCAACGTGCTAGACCCTTCTGTCATGTTCACTAGCAT
ATACACTGGGTTCATCTATGCCATTTTCAATTCCATGTTTGAGTTCTTTG
ATATTATATAGATGCTGTCCGCTTTTTCCGACACCGCTGTAGGCACCATG
GGCAGACTGTTGCTCCGGAGTCCCTCTCTCAGATATCCTGAGGACGAAGA
GGGTTTCCAACTGCTTCAATTTGCTCGTGCATGGTCTGTAATAGAAGTTC
CGAACTCTAGTGCCATATGGCTAGATGAGGAAAGTGGAATGCAGAGACGA
GACGAGCTGGTCAATCCCTCTTTTCCGACGACGGCCTTGGAGACTCAAGA
GGCAGTTCCCTCTACTCCCACTGTACCTAGATATAGGGACAAGATAATAA
TTGTTGACTGGTACGGGGATGACGATCCTTCCAACCCCTTGAATTGGTCC
TTTCAAAAGAAGGCGGTCGTATTCGTCATTATCAACTTCAGTGCCTGCGT
CGTCTACATGTGCGCAGCAATTTATACGCCATCCCAACCAGAAATTGAAC
GCACTTTTAATATCTCAGCGACCATCTCCAGCTTGGGACTTGCTCTTTTC
CTTCTAGGATACGGTAGCGGCTCGCTGCTCTTTGCGCCAATCTCCGAGAT
TCCCTCGATTGGTCGAAACTGGCCCTATCTAATTTCCTTATTCATCTTCG
TCGTGCTCGCAATCCCAACGGCATTATCGGAGACATTTGAGGGGTTGATG
ATTTTACGTTTCATTCAAGGCTTCTTCGGATCCCCGATACTCTCGACTGG
GGGAGCATCATTGAGAGATATCTCGGATCCAAGTATGCGACCATATGTGC
TGTATTCCTGGGCAGATTTTGCATTCGCAGGGCCTTCAATAGGCAACATA
ATTGCGGGATACGGCGTGCCCCAACTGGGCTGGCGGTGGAGCCTGTGGGA
AATTCTGATTTGCACTAGCCCTGCTTTGATCTTACACTTATTTCTTCCGG
AGACATCTGAGGAGAACATTCTCCTTCGCCGCGCTCAGCGAATTCGCCAG
GCAACCGGCCTTGGTTATTACCGGGCCAAATCCGAGCTCAACGCTGAAAG
GTCTACATGGAAGGATCGTTTCTGGGGTTTTCTCGTCATGCCCTGGAAAA
TCAACGTGCTAGACCCTTCTGTCATGTTCACTAGCATATACACTGGGTTC
ATCTATGCCATTTTCAATTCCATGTTTGAGTTCTTTGATATTATATAGAT
GCTGTCCGCTTTTTCCGACACCGCTGTAGGCACCATGGGCAGACTGTTGC
TCCGGAGTCCCTCTCTCAGATATCCTGAGGACGAAGAGGGTTTCCAACTG
CTTCAATTTGCTCGTGCATGGTCTGTAATAGAAGTTCCGAACTCTAGTGC
CATATGGCTAGATGAGGAAAGTGGAATGCAGAGACGAGACGAGCTGGTCA
ATCCCTCTTTTCCGACGACGGCCTTGGAGACTCAAGAGGCAGTTCCCTCT
ACTCCCACTGTACCTAGATATAGGGACAAGATAATAATTGTTGACTGGTA
CGGGGATGACGATCCTTCCAACCCCTTGAATTGGTCCTTTCAAAAGAAGG
CGGTCGTATTCGTCATTATCAACTTCAGTGCCTGCGTCGTCTACATGTGC
GCAGCAATTTATACGCCATCCCAACCAGAAATTGAACGCACTTTTAATAT
CTCAGCGACCATCTCCAGCTTGGGACTTGCTCTTTTCCTTCTAGGATACG
GTAGCGGCTCGCTGCTCTTTGCGCCAATCTCCGAGATTCCCTCGATTGGT
CGAAACTGGCCCTATCTAATTTCCTTATTCATCTTCGTCGTGCTCGCAAT
CCCAACGGCATTATCGGAGACATTTGAGGGGTTGATGATTTTACGTTTCA
TTCAAGGCTTCTTCGGATCCCCGATACTCTCGACTGGGGGAGCATCATTG
AGAGATATCTCGGATCCAAGTATGCGACCATATGTGCTGTATTCCTGGGC
AGATTTTGCATTCGCAGGGCCTTCAATAGGCAACATAATTGCGGGATACG
GCGTGCCCCAACTGGGCTGGCGGTGGAGCCTGTGGGAAATTCTGATTTGC
ACTAGCCCTGCTTTGATCTTACAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11860CAN33_11860Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11860-T1CAN33_11860-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11860-T1.cdsCAN33_11860-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11860-T1.exon2CAN33_11860-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_11860-T1.exon1CAN33_11860-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:912453..913646 -
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