You are here

Home

CAN33_1200-T1, CAN33_1200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_1200-T1
Unique NameCAN33_1200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:691480..692044-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_1200-T1 ID=CAN33_1200-T1|Name=CAN33_1200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=565bp|location=Sequence derived from alignment at NKJJ01000004.1:691480..692044- (Aspergillus niger FDAARGOS_311)
ATGATCCCCAAGTTTATCCGGAACCGCGGCGCTAAAGAAACCAAGCCGTA
TAAACCGAAATCCAAGGAATGGAACCCCGCAAGTTTCTACATCATCATCT
TCATCCTGATCGGATCTCAGGCCATCCGGATGATCGCATTGAAGAATGAC
TATGCGGCGTATACGCGATCGACAGATGCGAAGATCAGGCTCCTCCGGGA
GGTGATAGAAAGGGTGAACAATGGAGAGAAGGTCGATGTGGAGAAATTGT
TGGGCACGGGGGATGAGGCGAAGGAAAGAGAATGGGAGGAAGGTTGGTGC
TTTTTTACCGTTCTACCATACTTGGAAATCTGCTTTTACTGACATGGGGC
TCTTCTTTGATATAGTACTCCGTGAGATCGAAGCGGAAGATTCATTATGG
CATCGCAAGGCGGCCGCATCGGAAGCTCAGCAAGAGCAGGTTGAGGAACC
AAAACAATCGATAATGAAGTCAATTATCAAAGAGCCTGCTGTACCTGCTG
AGGGACCTCGGGATCAAGGTCTACCTGCCGATAGCCCGTCTAAGAAGAAG
CTCAATTTCTTCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:691480..692044-

>CAN33_1200-T1 ID=CAN33_1200-T1|Name=CAN33_1200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=984bp|location=Sequence derived from alignment at NKJJ01000004.1:691480..692044- (Aspergillus niger FDAARGOS_311)
TACTCCGTGAGATCGAAGCGGAAGATTCATTATGGCATCGCAAGGCGGCC
GCATCGGAAGCTCAGCAAGAGCAGGTTGAGGAACCAAAACAATCGATAAT
GAAGTCAATTATCAAAGAGCCTGCTGTACCTGCTGAGGGACCTCGGGATC
AAGGTCTACCTGCCGATAGCCCGTCTAAGAAGAAGCTCAATTTCTTCTAA
ATGATCCCCAAGTTTATCCGGAACCGCGGCGCTAAAGAAACCAAGCCGTA
TAAACCGAAATCCAAGGAATGGAACCCCGCAAGTTTCTACATCATCATCT
TCATCCTGATCGGATCTCAGGCCATCCGGATGATCGCATTGAAGAATGAC
TATGCGGCGTATACGCGATCGACAGATGCGAAGATCAGGCTCCTCCGGGA
GGTGATAGAAAGGGTGAACAATGGAGAGAAGGTCGATGTGGAGAAATTGT
TGGGCACGGGGGATGAGGCGAAGGAAAGAGAATGGGAGGAAGTACTCCGT
GAGATCGAAGCGGAAGATTCATTATGGCATCGCAAGGCGGCCGCATCGGA
AGCTCAGCAAGAGCAGGTTGAGGAACCAAAACAATCGATAATGAAGTCAA
TTATCAAAGAGCCTGCTGTACCTGCTGAGGGACCTCGGGATCAAGGTCTA
CCTGCCGATAGCCCGTCTAAGAAGAAGCTCAATTTCTTCTAAATGATCCC
CAAGTTTATCCGGAACCGCGGCGCTAAAGAAACCAAGCCGTATAAACCGA
AATCCAAGGAATGGAACCCCGCAAGTTTCTACATCATCATCTTCATCCTG
ATCGGATCTCAGGCCATCCGGATGATCGCATTGAAGAATGACTATGCGGC
GTATACGCGATCGACAGATGCGAAGATCAGGCTCCTCCGGGAGGTGATAG
AAAGGGTGAACAATGGAGAGAAGGTCGATGTGGAGAAATTGTTGGGCACG
GGGGATGAGGCGAAGGAAAGAGAATGGGAGGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_1200CAN33_1200Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1200-T1CAN33_1200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1200-T1.cdsCAN33_1200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_1200-T1.exon2CAN33_1200-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_1200-T1.exon1CAN33_1200-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035213
DBxrefInterPro:IPR014825
DBxrefPFAM:PF17254
ProductDNA alkylation repair enzyme family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:691480..692044 -
Powered by Drupal