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CAN33_12030-T1, CAN33_12030-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12030-T1
Unique NameCAN33_12030-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:1008713..1010083+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12030-T1 ID=CAN33_12030-T1|Name=CAN33_12030-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1371bp|location=Sequence derived from alignment at NKJJ01000009.1:1008713..1010083+ (Aspergillus niger FDAARGOS_311)
ATGGATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTT
GAAAAGGTATCGGAAGCAAGGACATGCTGATGCAGCTACTGAGCTAGAGA
CGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCG
CTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTG
GAACTCGGCCGTAGATGTCGGAACGATTGTGGTCGATGCCCGACGGGCGC
AGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTA
TCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCG
CCAGGTCACAGAGGCCCGTCGCAAGGTCCTGGGAGAGGATCACTCCCACA
CGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCAT
TGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCG
AAGATTCGGCCAGGACAACCAATCTACCCTCACGTCCATGGGCAACCTGG
CCAACACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAG
AAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTC
CACCTTGATGTGGAAGTCGAACCTGGCAGCCACGTATCGAGAGCAGGGTC
GATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATC
GAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCT
TGCAACGATGTACCGGGACCAGGGGCGATTGGAGGACGCAGAACATCTGG
AGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCG
CAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGA
TCGCATGGAAGAGGCCGCCAGTCTCGGGGCACGAGCGGTGGCTGTGATGA
AGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGAT
CTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATT
GACCGCACAGGTGCTGCGTCTGATGCAGAAGAACCTCGGACCGCTCCATC
CCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAG
GGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCG
GGAGAAGGTCTTGGGGAAAACGCACCCGGACACGCAGGCGTCGATGGAAG
ATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATA
CACATGCGTCATACCCAATAG
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Coding sequence (CDS) from alignment at NKJJ01000009.1:1008713..1010083+

>CAN33_12030-T1 ID=CAN33_12030-T1|Name=CAN33_12030-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1371bp|location=Sequence derived from alignment at NKJJ01000009.1:1008713..1010083+ (Aspergillus niger FDAARGOS_311)
ATGGATGTTTCGCTCTCTCCTTCGTATCTGAAGGCGTTCAGGGCTCTGTT
GAAAAGGTATCGGAAGCAAGGACATGCTGATGCAGCTACTGAGCTAGAGA
CGGTGGTGGAGCAGGTCTCCAGTGAGAACCGGGGAGACTCGGGCGTCGCG
CTGAAGCGCTTCGAGGCGCTGGTCCTCGCCTTCCTTGAGCGAGGTCAGTG
GAACTCGGCCGTAGATGTCGGAACGATTGTGGTCGATGCCCGACGGGCGC
AGCTAGGTCCCAACGATCCCATCACCATGGCTGCGGTCCACAACTTGGTA
TCGGGGTACTGTGGCCAGGGCCGTTGGACGGAAGCGATTGATCTGGGTCG
CCAGGTCACAGAGGCCCGTCGCAAGGTCCTGGGAGAGGATCACTCCCACA
CGATGGCCTCCATGTCCAACTTGGCTACCGCATATCGGAGGGAGGGGCAT
TGGCGACAATCCGAGGCGCTCGAACTTCGTCTGCTGCAGATCAAGACGCG
AAGATTCGGCCAGGACAACCAATCTACCCTCACGTCCATGGGCAACCTGG
CCAACACGTACACTCACATGGGGCGATATGATGATGCAGAACGACTGGAG
AAGAGGGTAGTGGAACAATGTACACGTGCGATGGGTGAGCACCATGGGTC
CACCTTGATGTGGAAGTCGAACCTGGCAGCCACGTATCGAGAGCAGGGTC
GATTGGAGGAAGCCTTGAAGTTGGAGTCGGAAGTGATGGAGATCCGGATC
GAGCGACTCGGAACCCACCACCCGTTGACGCTGACATCCATGGCGAACCT
TGCAACGATGTACCGGGACCAGGGGCGATTGGAGGACGCAGAACATCTGG
AGACGCAGGTCGTAGAGATAAGCAAGATCGAGCTAGGGGAGCAGCATCCG
CAGACCCTGATGTCGATGATCAACTTGGCGTCCACCTACCGGGGCCAGGA
TCGCATGGAAGAGGCCGCCAGTCTCGGGGCACGAGCGGTGGCTGTGATGA
AGTCACGCCTGGGTGAGCAGAACCCGTTAACCCTGACTGCCATGGCGGAT
CTCGCCTTGACCTACCAGGGTCAAGGCAAGACAGGGAGCGCCGAAGCATT
GACCGCACAGGTGCTGCGTCTGATGCAGAAGAACCTCGGACCGCTCCATC
CCCACACACTGACGACCATGGCCAACCTGGGGGCCATCTACCAGTCACAG
GGCCGCTGGGATGAAGCCGAGGCGCTGGCGGAGCAAGCGGTGCGTGGCCG
GGAGAAGGTCTTGGGGAAAACGCACCCGGACACGCAGGCGTCGATGGAAG
ATCTGCTGCGCGTGTATCGAGTGTTGGCGGCGGATCGCACGACGGGAATA
CACATGCGTCATACCCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12030CAN33_12030Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12030-T1.exon1CAN33_12030-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12030-T1.cdsCAN33_12030-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12030-T1CAN33_12030-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13176
DBxrefPFAM:PF07721
DBxrefPFAM:PF13424
DBxrefPFAM:PF13374
DBxrefPFAM:PF01535
ProductTetratricopeptide repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:1008713..1010083 +
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