You are here

Home

CAN33_12035-T1, CAN33_12035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12035-T1
Unique NameCAN33_12035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:1010989..1012012+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12035-T1 ID=CAN33_12035-T1|Name=CAN33_12035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1024bp|location=Sequence derived from alignment at NKJJ01000009.1:1010989..1012012+ (Aspergillus niger FDAARGOS_311)
ATGACGGCCTCGACGGAAGATATTTCGCCCTTTTCGGTGGAAGGGAAGAC
GGCCATTGTCACGGGCGCTGGCTCGGGTTAGTCTCCTCTCCTTCCCTTCG
CTTGACAGTCTTCTGATGGTGATAGGGATCAATCTGTCATTTGCATCTCT
TCTACTATCCCGGAATTGCAATGTAGTGGTGGCCGACATCGCATTGCGAC
CAGAAGCCGAGCAACTCATTGCCAAGTATGAGGCCGCCGATTCCTCCCCG
CGAGCAGTTTTCATTCGCACAGACGTCACCTCTTGGGCAGACCTGAATCG
CATGTTCGATTTGACCTTGTCCTTGTTCGAAGAATTCCATATCCTCTGTC
CTGGGGCTGGGGTCTACGAGCCCCCGTGGTCAAATTTCTGGCAGCCACCC
GGTTCCGCGATCAGCAAAGACAAGGACGACAGCGACCGGTACGCTCTACT
GGATATCAACGTCACGCATCCGATCCGAACGACCCAACTGGCCTTGTCGC
ACTGGTTGCATCCGACGAGCCCCAACGTGACTCCTGTCTCCCCGCAGAAT
CCCCGCCGCGTTATTCACATCTCCTCCGTGGCAGCCCAACTGCCGAACGT
TGTGTGTCCCATGTATGGCGCTTCAAAGGCCGCCATTACCGGCTTTGTGC
GATGTCTAGCCCCCCTCGAACAAGCCATTGGCGTCCGCGTCAATGCAGTG
GCCCCCGGTCTCATACGTACGCCATTGTGGGTTGAAAATCAGGAGAAGTT
GATGCTTATCGACCAGGAGAAGGATGGATGGGCAACGCCCGAAGAGGTCG
CCTCAGCCATGCTACGATGCATGGAAGAGAAGGAGCTTGAGGGTGGAACA
ATCCTAGAAGTTGTTCGCAACTCAACCCGACGCGTCGAGACGCTCAATGA
CCCAGGTCCCGCCAGGGCGGCTGGGGATGCCTCCATTGCCAGCAAGAATC
AGCAGGGGGTGGACCAACTCCTCGAATTCCTGAAGCAGAAGGATATATGG
GCCCCACAACAGCGGTCGACGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:1010989..1012012+

>CAN33_12035-T1 ID=CAN33_12035-T1|Name=CAN33_12035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1950bp|location=Sequence derived from alignment at NKJJ01000009.1:1010989..1012012+ (Aspergillus niger FDAARGOS_311)
ATGACGGCCTCGACGGAAGATATTTCGCCCTTTTCGGTGGAAGGGAAGAC
GGCCATTGTCACGGGCGCTGGCTCGGGGATCAATCTGTCATTTGCATCTC
TTCTACTATCCCGGAATTGCAATGTAGTGGTGGCCGACATCGCATTGCGA
CCAGAAGCCGAGCAACTCATTGCCAAGTATGAGGCCGCCGATTCCTCCCC
GCGAGCAGTTTTCATTCGCACAGACGTCACCTCTTGGGCAGACCTGAATC
GCATGTTCGATTTGACCTTGTCCTTGTTCGAAGAATTCCATATCCTCTGT
CCTGGGGCTGGGGTCTACGAGCCCCCGTGGTCAAATTTCTGGCAGCCACC
CGGTTCCGCGATCAGCAAAGACAAGGACGACAGCGACCGGTACGCTCTAC
TGGATATCAACGTCACGCATCCGATCCGAACGACCCAACTGGCCTTGTCG
CACTGGTTGCATCCGACGAGCCCCAACGTGACTCCTGTCTCCCCGCAGAA
TCCCCGCCGCGTTATTCACATCTCCTCCGTGGCAGCCCAACTGCCGAACG
TTGTGTGTCCCATGTATGGCGCTTCAAAGGCCGCCATTACCGGCTTTGTG
CGATGTCTAGCCCCCCTCGAACAAGCCATTGGCGTCCGCGTCAATGCAGT
GGCCCCCGGTCTCATACGTACGCCATTGTGGGTTGAAAATCAGGAGAAGT
TGATGCTTATCGACCAGGAGAAGGATGGATGGGCAACGCCCGAAGAGGTC
GCCTCAGCCATGCTACGATGCATGGAAGAGAAGGAGCTTGAGGGTGGAAC
AATCCTAGAAGTTGTTCGCAACTCAACCCGACGCGTCGAGACGCTCAATG
ACCCAGGTCCCGCCAGGGCGGCTGGGGATGCCTCCATTGCCAGCAAGAAT
CAGCAGGGGGTGGACCAACTCCTCGAATTCCTGAAGCAGAAGGATATATG
GGCCCCACAACAGCGGTCGACGTAGATGACGGCCTCGACGGAAGATATTT
CGCCCTTTTCGGTGGAAGGGAAGACGGCCATTGTCACGGGCGCTGGCTCG
GGGATCAATCTGTCATTTGCATCTCTTCTACTATCCCGGAATTGCAATGT
AGTGGTGGCCGACATCGCATTGCGACCAGAAGCCGAGCAACTCATTGCCA
AGTATGAGGCCGCCGATTCCTCCCCGCGAGCAGTTTTCATTCGCACAGAC
GTCACCTCTTGGGCAGACCTGAATCGCATGTTCGATTTGACCTTGTCCTT
GTTCGAAGAATTCCATATCCTCTGTCCTGGGGCTGGGGTCTACGAGCCCC
CGTGGTCAAATTTCTGGCAGCCACCCGGTTCCGCGATCAGCAAAGACAAG
GACGACAGCGACCGGTACGCTCTACTGGATATCAACGTCACGCATCCGAT
CCGAACGACCCAACTGGCCTTGTCGCACTGGTTGCATCCGACGAGCCCCA
ACGTGACTCCTGTCTCCCCGCAGAATCCCCGCCGCGTTATTCACATCTCC
TCCGTGGCAGCCCAACTGCCGAACGTTGTGTGTCCCATGTATGGCGCTTC
AAAGGCCGCCATTACCGGCTTTGTGCGATGTCTAGCCCCCCTCGAACAAG
CCATTGGCGTCCGCGTCAATGCAGTGGCCCCCGGTCTCATACGTACGCCA
TTGTGGGTTGAAAATCAGGAGAAGTTGATGCTTATCGACCAGGAGAAGGA
TGGATGGGCAACGCCCGAAGAGGTCGCCTCAGCCATGCTACGATGCATGG
AAGAGAAGGAGCTTGAGGGTGGAACAATCCTAGAAGTTGTTCGCAACTCA
ACCCGACGCGTCGAGACGCTCAATGACCCAGGTCCCGCCAGGGCGGCTGG
GGATGCCTCCATTGCCAGCAAGAATCAGCAGGGGGTGGACCAACTCCTCG
AATTCCTGAAGCAGAAGGATATATGGGCCCCACAACAGCGGTCGACGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12035CAN33_12035Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12035-T1.exon1CAN33_12035-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_12035-T1.exon2CAN33_12035-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12035-T1.cdsCAN33_12035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12035-T1CAN33_12035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:1010989..1012012 +
Powered by Drupal