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CAN33_12120-T1, CAN33_12120-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12120-T1
Unique NameCAN33_12120-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:1062267..1063209-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12120-T1 ID=CAN33_12120-T1|Name=CAN33_12120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=943bp|location=Sequence derived from alignment at NKJJ01000009.1:1062267..1063209- (Aspergillus niger FDAARGOS_311)
ATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGTGA
GATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGCAA
GAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTGAC
TCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCAGA
TTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGATAT
CAACGAGCCAATGTGCGAGACCCAACCCCCGTCCTAGAGTGAGACCATAC
TCCAATCCTTCGCGAGATAACAATCTACTAATCCCTCTCAGCATTGCCAT
AGAGGACGAAGAGATGACGACTTGGTTCTTGGACCATGGAGCGGATCCTA
ATAGACGAACGTTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGGAAGA
TCACCCGTTTCCGTGATCCGCCTCATGCTGGATTATTGCCAAGATATTCA
TCCAGGTCAGCTGCTTCATCATGCGGTTCAACGCGAATCTGACACTATCG
AAGTACTGGAAATGTTAATCCAGAAGGGAGCGCCTCTTAACACTCCCGTG
CACGAAGACCTTCCTACCTTATCGATTCTTTGCTTTATGCCTCTAGGAAC
TGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATC
TCCTCAGCAAAGGAGCCGACCAGAGTGTCAGAGATAGTAATGGACTTACA
GCTATTGAACTGGCTGCTGGATTGAACCAGCAAGAAGTGGTTGAAGTGCT
GCAGAAACATAGAAACGGCGGAAATCCCGTTGACCACCCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000009.1:1062267..1063209-

>CAN33_12120-T1 ID=CAN33_12120-T1|Name=CAN33_12120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1728bp|location=Sequence derived from alignment at NKJJ01000009.1:1062267..1063209- (Aspergillus niger FDAARGOS_311)
CATTGCCATAGAGGACGAAGAGATGACGACTTGGTTCTTGGACCATGGAG
CGGATCCTAATAGACGAACGTTCATAGACCTTACCCCGCTTTCGTGGGCT
GTTGGAAGATCACCCGTTTCCGTGATCCGCCTCATGCTGGATTATTGCCA
AGATATTCATCCAGGTCAGCTGCTTCATCATGCGGTTCAACGCGAATCTG
ACACTATCGAAGTACTGGAAATGTTAATCCAGAAGGGAGCGCCTCTTAAC
ACTCCCGTGCACGAAGACCTTCCTACCTTATCGATTCTTTGCTTTATGCC
TCTAGGAACTGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGG
TTCGCTATCTCCTCAGCAAAGGAGCCGACCAGAGTGTCAGAGATAGTAAT
GGACTTACAGCTATTGAACTGGCTGCTGGATTGAACCAGCAAGAAGTGGT
TGAAGTGCTGCAGAAACATAGAAACGGCGGAAATCCCGTTGACCACCCCT
GAATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGT
GAGATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGC
AAGAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTG
ACTCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATT
ATCATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCT
GATGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCA
GATTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGAT
ATCAACGAGCCAATCATTGCCATAGAGGACGAAGAGATGACGACTTGGTT
CTTGGACCATGGAGCGGATCCTAATAGACGAACGTTCATAGACCTTACCC
CGCTTTCGTGGGCTGTTGGAAGATCACCCGTTTCCGTGATCCGCCTCATG
CTGGATTATTGCCAAGATATTCATCCAGGTCAGCTGCTTCATCATGCGGT
TCAACGCGAATCTGACACTATCGAAGTACTGGAAATGTTAATCCAGAAGG
GAGCGCCTCTTAACACTCCCGTGCACGAAGACCTTCCTACCTTATCGATT
CTTTGCTTTATGCCTCTAGGAACTGCTCTGCACCGGGCATGTGAGCTCGG
AAAAGTGGATGTGGTTCGCTATCTCCTCAGCAAAGGAGCCGACCAGAGTG
TCAGAGATAGTAATGGACTTACAGCTATTGAACTGGCTGCTGGATTGAAC
CAGCAAGAAGTGGTTGAAGTGCTGCAGAAACATAGAAACGGCGGAAATCC
CGTTGACCACCCCTGAATGAACGTACAATCTGCTTCAGGCTCGGCTTCGC
CTTCTACTTGGGGTGAGATCTATCAAGTTCCAGGCCGGACCTCTCGGGAA
ATCCTTCTGAGAGCAAGAGAGCTATGCCTCAGTGGGAATATCCAACAATT
CCGCGACCTCATTGACTCGGCACAATCGTCATCGGAGAACTTTCATATAG
AAGACTTCGGTATTATCATGGGGCAGGCTGTCGAGCAAGACAGCGTGATC
TTCATGCGGGAGCTGATGGATCGTGGCTTTCCCACGCATTCAATCTACGC
CCGGAACGCAACCAGATTCAAATCCAAGAATGCCCTCGCTCTTCTTATTG
AGAAGGGATGGGATATCAACGAGCCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12120CAN33_12120Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12120-T1CAN33_12120-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12120-T1.cdsCAN33_12120-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12120-T1.exon2CAN33_12120-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12120-T1.exon1CAN33_12120-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:1062267..1063209 -
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